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PMC:7091888 / 5894-6821 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
220 192-193 Gene denotes S Gene:43740568
221 27-37 Species denotes SARS-CoV-2 Tax:2697049
222 84-94 Species denotes SARS-CoV-2 Tax:2697049
223 96-104 Species denotes SARS-CoV Tax:694009
224 110-118 Species denotes MERS-CoV Tax:1335626
225 181-191 Species denotes SARS-CoV-2 Tax:2697049
226 208-216 Species denotes SARS-CoV Tax:694009
227 237-245 Species denotes MERS-CoV Tax:1335626
228 287-297 Species denotes SARS-CoV-2 Tax:2697049
229 302-310 Species denotes SARS-CoV Tax:694009
230 365-375 Species denotes SARS-CoV-2 Tax:2697049
231 377-385 Species denotes SARS-CoV Tax:694009
232 391-399 Species denotes MERS-CoV Tax:1335626
233 663-673 Species denotes SARS-CoV-2 Tax:2697049
234 747-755 Species denotes SARS-CoV Tax:694009
235 760-768 Species denotes MERS-CoV Tax:1335626
236 834-838 Species denotes mice Tax:10090
237 854-862 Species denotes SARS-CoV Tax:694009
238 119-124 Gene denotes spike Gene:43740568
239 614-617 Chemical denotes SDS MESH:D012967

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T29 129-137 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T30 259-269 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T31 683-690 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T114 27-35 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 27-31 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T116 84-92 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 84-88 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T118 96-104 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T119 96-100 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T120 181-189 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 181-185 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T122 208-216 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T123 208-212 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T124 287-295 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 287-291 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T126 302-310 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T127 302-306 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T128 365-373 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T129 365-369 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T130 377-385 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T131 377-381 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T132 663-671 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T133 663-667 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T134 747-755 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T135 747-751 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T136 854-862 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T137 854-858 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T53 43-44 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 259-278 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino acid residues
T55 259-278 http://purl.obolibrary.org/obo/PR_000036907 denotes amino acid residues
T56 473-479 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colons
T57 624-625 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T34 129-137 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T35 259-269 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T36 259-264 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T37 265-269 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T38 614-617 Chemical denotes SDS http://purl.obolibrary.org/obo/CHEBI_8984
T39 683-690 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T22 0-138 Sentence denotes Fig. 1 Characterization of SARS-CoV-2 RBD. a Multiple sequence alignment of RBDs of SARS-CoV-2, SARS-CoV, and MERS-CoV spike (S) proteins.
T23 139-249 Sentence denotes GenBank accession numbers are QHR63250.1 (SARS-CoV-2 S), AY278488.2 (SARS-CoV S), and AFS88936.1 (MERS-CoV S).
T24 250-426 Sentence denotes Variable amino acid residues between SARS-CoV-2 and SARS-CoV are highlighted in cyan, and conserved residues among SARS-CoV-2, SARS-CoV, and MERS-CoV are highlighted in yellow.
T25 427-564 Sentence denotes Asterisks represent fully conserved residues, colons represent highly conserved residues, and periods represent lowly conserved residues.
T26 565-613 Sentence denotes The alignment was performed using Clustal Omega.
T27 614-678 Sentence denotes SDS-PAGE (b) and Western blot (c, d) analysis of SARS-CoV-2 RBD.
T28 679-746 Sentence denotes The protein molecular weight marker (kDa) is indicated on the left.
T29 747-800 Sentence denotes SARS-CoV and MERS-CoV RBDs were included as controls.
T30 801-927 Sentence denotes Antisera (1:3,000 dilution) from mice immunized with SARS-CoV RBD (c) and MERS-CoV RBD (d) were used for Western blot analysis