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PMC:7088323 / 8915-9987 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T20 290-300 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T21 455-460 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T22 792-807 Body_part denotes left lower lobe http://purl.org/sig/ont/fma/fma7371
T23 1043-1060 Body_part denotes right middle lobe http://purl.org/sig/ont/fma/fma7383

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T13 455-460 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T14 803-807 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T15 1056-1060 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T49 481-489 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T50 631-639 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 685-693 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T52 865-873 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T101 151-152 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T102 221-223 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2a
T103 354-356 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T104 455-460 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T105 533-535 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T106 650-652 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T107 660-663 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2 a
T108 664-665 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T109 666-668 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T110 678-684 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T111 841-842 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T112 858-864 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T14 713-718 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T15 724-733 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T16 893-898 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T17 904-909 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T6 230-239 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T62 0-225 Sentence denotes Reticular pattern was defined as thickened pulmonary interstitial structures such as interlobular septa and intralobular lines [26, 29], manifested as a collection of innumerable small linear opacities on CT images (Fig. 2a).
T63 226-358 Sentence denotes The formation of this pattern might associate with interstitial lymphocyte infiltration causing interlobular septal thickening [27].
T64 359-541 Sentence denotes Several studies have listed reticular pattern with interlobular septal thickening as the common chest CT manifestation of COVID-19, only second to GGO and consolidation [15, 18, 19].
T65 542-654 Sentence denotes As the disease course gets longer, the prevalence of reticular pattern could increase in COVID-19 patients [18].
T66 655-745 Sentence denotes Fig. 2 a A 34-year-old female COVID-19 patient presenting fever with dry cough for 2 days.
T67 746-921 Sentence denotes CT scan shows slight reticular pattern in the left lower lobe and subpleural area (red frame). b An 81-year-old female COVID-19 patient presenting fever with cough for 7 days.
T68 922-1072 Sentence denotes CT scan shows reticular pattern superimposed on the background of GGO, resembling the sign of crazy paving stones in the right middle lobe (red frame)

0_colil

Id Subject Object Predicate Lexical cue
32193638-18195376-54925 128-130 18195376 denotes 26
32193638-24918624-54926 132-134 24918624 denotes 29
32193638-32027573-54927 537-539 32027573 denotes 19

TEST0

Id Subject Object Predicate Lexical cue
32193638-128-134-54925 128-130 ["18195376"] denotes 26
32193638-132-138-54926 132-134 ["24918624"] denotes 29
32193638-178-184-54927 537-539 ["32027573"] denotes 19

MyTest

Id Subject Object Predicate Lexical cue
32193638-18195376-29362778 128-130 18195376 denotes 26
32193638-24918624-29362779 132-134 24918624 denotes 29
32193638-32027573-29362780 537-539 32027573 denotes 19

2_test

Id Subject Object Predicate Lexical cue
32193638-18195376-29362778 128-130 18195376 denotes 26
32193638-24918624-29362779 132-134 24918624 denotes 29
32193638-32027573-29362780 537-539 32027573 denotes 19

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
148 694-701 Species denotes patient Tax:9606
149 874-881 Species denotes patient Tax:9606
150 685-693 Disease denotes COVID-19 MESH:C000657245
151 713-718 Disease denotes fever MESH:D005334
152 724-733 Disease denotes dry cough MESH:D003371
153 865-873 Disease denotes COVID-19 MESH:C000657245
154 893-898 Disease denotes fever MESH:D005334
155 904-909 Disease denotes cough MESH:D003371
159 640-648 Species denotes patients Tax:9606
160 481-489 Disease denotes COVID-19 MESH:C000657245
161 631-639 Disease denotes COVID-19 MESH:C000657245