PMC:7088323 / 18508-19085
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T56 | 99-116 | Body_part | denotes | mediastinal nodes | http://purl.org/sig/ont/fma/fma12774 |
| T57 | 377-381 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T58 | 489-494 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T59 | 542-565 | Body_part | denotes | mediastinal lymph nodes | http://purl.org/sig/ont/fma/fma12774 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T43 | 341-357 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T44 | 377-381 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T45 | 489-494 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T46 | 542-565 | Body_part | denotes | mediastinal lymph nodes | http://purl.obolibrary.org/obo/UBERON_0002524 |
| T47 | 554-559 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T109 | 15-30 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T110 | 132-147 | Disease | denotes | Lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T111 | 186-194 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T112 | 215-230 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T113 | 301-309 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T114 | 310-319 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T115 | 461-469 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T217 | 164-167 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 4~8 |
| T218 | 200-202 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T219 | 341-357 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T220 | 377-381 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T221 | 377-381 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T222 | 428-430 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T223 | 440-441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T224 | 454-460 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T225 | 489-494 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T226 | 554-565 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T62 | 15-30 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T63 | 132-147 | Phenotype | denotes | Lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T64 | 215-230 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T65 | 310-319 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T66 | 341-357 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T67 | 489-499 | Phenotype | denotes | chest pain | http://purl.obolibrary.org/obo/HP_0100749 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10 | 80-85 | http://purl.obolibrary.org/obo/GO_0042330 | denotes | taxis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T134 | 0-131 | Sentence | denotes | Thresholds for lymphadenopathy were somewhat arbitrary, typically 1 cm in short taxis diameter for mediastinal nodes [26] (Fig. 6). |
| T135 | 132-204 | Sentence | denotes | Lymphadenopathy was reported in 4~8% of patients with COVID-19 [15, 18]. |
| T136 | 205-325 | Sentence | denotes | Moreover, lymphadenopathy was considered one of the significant risk factors of severe/critical COVID-19 pneumonia [23]. |
| T137 | 326-432 | Sentence | denotes | Occurring with pleural effusion and extensive tiny lung nodules may suggest bacterial superinfection [41]. |
| T138 | 433-512 | Sentence | denotes | Fig. 6 A 49-year-old female COVID-19 patient presenting chest pain for 14 days. |
| T139 | 513-577 | Sentence | denotes | CT scan shows enlargement of mediastinal lymph nodes (asterisks) |
0_colil
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32193638-18195376-54946 | 118-120 | 18195376 | denotes | 26 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32193638-118-124-54946 | 118-120 | ["18195376"] | denotes | 26 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32193638-18195376-29362799 | 118-120 | 18195376 | denotes | 26 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32193638-18195376-29362799 | 118-120 | 18195376 | denotes | 26 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 371 | 470-477 | Species | denotes | patient | Tax:9606 |
| 372 | 461-469 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 373 | 489-499 | Disease | denotes | chest pain | MESH:D002637 |
| 381 | 172-180 | Species | denotes | patients | Tax:9606 |
| 382 | 15-30 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 383 | 132-147 | Disease | denotes | Lymphadenopathy | MESH:D008206 |
| 384 | 186-194 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 385 | 215-230 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 386 | 301-319 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
| 387 | 341-357 | Disease | denotes | pleural effusion | MESH:D010996 |