PMC:7088323 / 16257-17041
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T53 | 372-388 | Body_part | denotes | right upper lobe | http://purl.org/sig/ont/fma/fma7333 |
| T54 | 565-582 | Body_part | denotes | right middle lobe | http://purl.org/sig/ont/fma/fma7383 |
| T55 | 768-784 | Body_part | denotes | right lower lobe | http://purl.org/sig/ont/fma/fma7337 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T39 | 206-210 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T40 | 384-388 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T41 | 578-582 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T42 | 780-784 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T89 | 21-29 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T90 | 60-68 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T91 | 235-243 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T92 | 411-419 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T93 | 633-641 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T181 | 0-3 | http://purl.obolibrary.org/obo/CLO_0001627 | denotes | a A |
| T182 | 16-20 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T183 | 16-20 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T184 | 95-96 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T185 | 212-213 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T186 | 214-215 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T187 | 228-234 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T188 | 347-356 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
| T189 | 392-393 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T190 | 406-410 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T191 | 406-410 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T192 | 486-487 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T193 | 515-516 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T194 | 596-599 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | d A |
| T195 | 697-698 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T196 | 737-746 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T14 | 16-20 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
| T15 | 406-410 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T45 | 49-54 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T46 | 60-68 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T47 | 263-268 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T48 | 274-279 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T49 | 439-444 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T50 | 450-459 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T51 | 653-658 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T52 | 663-670 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T53 | 699-717 | Phenotype | denotes | reversed halo sign | http://purl.obolibrary.org/obo/HP_0032983 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T116 | 81-291 | Sentence | denotes | CT scan shows a patchy GGO (red frame) with an air bubble sign (white arrow) in the apicoposterior segment of the upper left lobe. b A 76-year-old female COVID-19 patient presenting fever with cough for 4 days. |
| T117 | 292-471 | Sentence | denotes | CT scan shows an irregular nodule (white arrow) in the posterior segment of the right upper lobe. c A 46-year-old male COVID-19 patient presenting fever with dry cough for 5 days. |
| T118 | 472-682 | Sentence | denotes | CT scan shows a solid nodule surrounded by a ground glass halo in the lateral segment of the right middle lobe (red frame). d A 66-year-old woman confirmed with COVID-19 presenting fever and myalgia for 7 days. |
| T119 | 683-784 | Sentence | denotes | CT scan shows a reversed halo sign (red frame) in the posterior basal segment of the right lower lobe |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 326 | 30-37 | Species | denotes | patient | Tax:9606 |
| 327 | 244-251 | Species | denotes | patient | Tax:9606 |
| 328 | 420-427 | Species | denotes | patient | Tax:9606 |
| 329 | 612-617 | Species | denotes | woman | Tax:9606 |
| 330 | 21-29 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 331 | 49-54 | Disease | denotes | fever | MESH:D005334 |
| 332 | 60-68 | Disease | denotes | diarrhea | MESH:D003967 |
| 333 | 235-243 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 334 | 263-268 | Disease | denotes | fever | MESH:D005334 |
| 335 | 274-279 | Disease | denotes | cough | MESH:D003371 |
| 336 | 411-419 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 337 | 439-444 | Disease | denotes | fever | MESH:D005334 |
| 338 | 450-459 | Disease | denotes | dry cough | MESH:D003371 |
| 339 | 633-641 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 340 | 653-658 | Disease | denotes | fever | MESH:D005334 |
| 341 | 663-670 | Disease | denotes | myalgia | MESH:D063806 |