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PMC:7084229 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
13 477-508 Gene denotes angiotensin-converting enzyme 2 Gene:59272
14 510-514 Gene denotes ACE2 Gene:59272
15 211-224 Species denotes coronaviruses Tax:11118
16 226-230 Species denotes CoVs Tax:11118
17 233-241 Species denotes SARS-CoV Tax:694009
18 246-256 Species denotes SARS-CoV-2 Tax:2697049
19 529-534 Species denotes human Tax:9606
20 741-750 Species denotes SARS-CoVs Tax:694009
21 1033-1038 Species denotes human Tax:9606
22 1072-1077 Species denotes human Tax:9606
23 1141-1146 Species denotes human Tax:9606
24 122-155 Disease denotes severe acute respiratory syndrome MESH:D045169
25 1147-1157 Disease denotes infections MESH:D007239
31 1811-1824 Species denotes coronaviruses Tax:11118
32 1826-1830 Species denotes CoVs Tax:11118
33 1841-1849 Species denotes SARS-CoV Tax:694009
34 1854-1864 Species denotes SARS-CoV-2 Tax:2697049
35 1616-1649 Disease denotes severe acute respiratory syndrome MESH:D045169
52 2060-2089 Gene denotes alpha, beta, gamma, and delta
53 1937-1941 Species denotes CoVs Tax:11118
54 2115-2123 Species denotes SARS-CoV Tax:694009
55 2130-2134 Species denotes CoVs Tax:11118
56 2149-2154 Species denotes human Tax:9606
57 2155-2168 Species denotes coronaviruses Tax:11118
58 2184-2188 Species denotes CoVs Tax:11118
59 2210-2215 Species denotes human Tax:9606
60 2275-2284 Species denotes HCoV-229E Tax:11137
61 2289-2298 Species denotes HCoV-NL63 Tax:277944
62 2322-2331 Species denotes HCoV-OC43 Tax:31631
63 2336-2345 Species denotes HCoV-HKU1 Tax:290028
64 2392-2400 Species denotes SARS-CoV Tax:694009
65 2475-2483 Species denotes MERS-CoV Tax:1335626
66 2250-2261 Disease denotes common cold MESH:D003139
67 2493-2525 Disease denotes Middle East respiratory syndrome MESH:D018352
80 2585-2616 Gene denotes angiotensin-converting enzyme 2 Gene:59272
81 2618-2622 Gene denotes ACE2 Gene:59272
82 2697-2719 Gene denotes dipeptidyl peptidase 4 Gene:1803
83 2721-2725 Gene denotes DPP4 Gene:1803
84 2538-2546 Species denotes SARS-CoV Tax:694009
85 2560-2568 Species denotes MERS-CoV Tax:1335626
86 2653-2658 Species denotes human Tax:9606
87 2683-2691 Species denotes MERS-CoV Tax:1335626
88 2755-2760 Species denotes human Tax:9606
89 2790-2798 Species denotes SARS-CoV Tax:694009
90 2803-2811 Species denotes MERS-CoV Tax:1335626
91 2857-2861 Species denotes CoVs Tax:11118
112 3149-3153 Gene denotes ACE2 Gene:59272
113 2974-2981 Species denotes new CoV Tax:2697049
114 3005-3015 Species denotes SARS-CoV-2 Tax:2697049
115 3017-3027 Species denotes SARS-CoV-2 Tax:2697049
116 3078-3086 Species denotes SARS-CoV Tax:694009
117 3158-3166 Species denotes SARS-CoV Tax:694009
118 3424-3430 Species denotes SARS-2 Tax:2697049
119 3547-3556 Species denotes 2019-nCoV Tax:2697049
120 3562-3572 Species denotes SARS-CoV-2 Tax:2697049
121 3612-3618 Species denotes SARS-2 Tax:2697049
122 2910-2919 Disease denotes pneumonia MESH:D011014
123 3198-3207 Disease denotes pneumonia MESH:D011014
124 3267-3292 Disease denotes new coronavirus pneumonia MESH:C000657245
125 3294-3297 Disease denotes NCP MESH:C000657245
126 3312-3336 Disease denotes coronavirus disease 2019 MESH:C000657245
127 3338-3346 Disease denotes COVID-19 MESH:C000657245
128 3409-3418 Disease denotes pneumonia MESH:D011014
129 3513-3522 Disease denotes pneumonia MESH:D011014
130 3596-3604 Disease denotes COVID-19 MESH:C000657245
131 3793-3803 Disease denotes 2019 SARSs MESH:C000657245
135 4297-4303 Species denotes SARS-2 Tax:2697049
136 4628-4633 Species denotes human Tax:9606
137 4756-4762 Species denotes SARS-2 Tax:2697049
139 4765-4768 Gene denotes 2.1 Gene:6700
143 4862-4868 Species denotes SARS-2 Tax:2697049
144 5063-5067 Disease denotes Cold MESH:D000067390
145 5876-5880 Disease denotes Cold MESH:D000067390
151 6219-6225 Species denotes humans Tax:9606
152 6514-6519 Species denotes human Tax:9606
153 6244-6248 Disease denotes Cold MESH:D000067390
154 6556-6571 Disease denotes viral infection MESH:D001102
155 6828-6835 Disease denotes fragile MESH:D005600
160 6973-6984 Species denotes coronavirus Tax:11118
161 7044-7052 Species denotes MERS-CoV Tax:1335626
162 7077-7084 Species denotes patient Tax:9606
163 7373-7398 Disease denotes human coronavirus disease MESH:D018352
167 7484-7493 Species denotes SARS-CoVs Tax:694009
168 7515-7523 Species denotes SARS-CoV Tax:694009
169 7546-7560 Species denotes horseshoe bats Tax:49442
192 8014-8018 Gene denotes ACE2 Gene:59272
193 7624-7628 Species denotes CoVs Tax:11118
194 7657-7671 Species denotes horseshoe bats Tax:49442
195 7673-7692 Species denotes Rhinolophus sinicus Tax:89399
196 7902-7907 Species denotes human Tax:9606
197 7918-7927 Species denotes SARS-CoVs Tax:694009
198 8067-8075 Species denotes SARS-CoV Tax:694009
199 8100-8114 Species denotes horseshoe bats Tax:49442
200 8178-8184 Species denotes humans Tax:9606
201 8397-8408 Species denotes coronaviral Tax:11118
202 8566-8571 Species denotes human Tax:9606
203 8578-8587 Species denotes SARS CoVs Tax:694009
204 8645-8649 Species denotes rats Tax:10116
205 8718-8722 Species denotes rats Tax:10116
206 7649-7656 Species denotes Chinese Tax:8656
207 8092-8099 Species denotes Chinese Tax:8656
208 7764-7770 Species denotes SL-CoV Tax:1508227
209 7929-7935 Species denotes SL-CoV Tax:1508227
210 8124-8130 Species denotes SL-CoV Tax:1508227
211 8496-8502 Species denotes SL-CoV Tax:1508227
212 8516-8522 Species denotes SL-CoV Tax:1508227
213 7789-7796 CellLine denotes Vero E6 CVCL:0574
216 8836-8840 Species denotes CoVs Tax:11118
217 8871-8877 Species denotes humans Tax:9606
223 8906-8916 Species denotes SARS-CoV-2 Tax:2697049
224 8965-8980 Species denotes bat coronavirus Tax:1508220
225 9109-9117 Species denotes SARS-CoV Tax:694009
226 9150-9158 Species denotes SARS-CoV Tax:694009
227 9163-9173 Species denotes SARS-CoV-2 Tax:2697049
246 9365-9371 Species denotes humans Tax:9606
247 9411-9422 Species denotes Nipah virus Tax:121791
248 9426-9429 Species denotes pig Tax:9823
249 9460-9468 Species denotes MERS-CoV Tax:1335626
250 9472-9477 Species denotes camel Tax:9837
251 9564-9572 Species denotes SARS-CoV Tax:694009
252 9675-9683 Species denotes SARS-CoV Tax:694009
253 9730-9738 Species denotes SARS-CoV Tax:694009
254 9744-9756 Species denotes domestic cat Tax:9685
255 9758-9765 Species denotes red fox Tax:9627
256 9767-9788 Species denotes Lesser rice field rat Tax:69075
257 9790-9795 Species denotes goose Tax:8847
258 9797-9818 Species denotes Chinese ferret-badger Tax:204267
259 9824-9833 Species denotes wild boar Tax:9823
260 9933-9947 Species denotes horseshoe bats Tax:49442
261 9959-9963 Species denotes cats Tax:9685
262 10049-10055 Species denotes humans Tax:9606
263 10027-10045 Disease denotes SARS-CoV infection MESH:C000657245
280 10152-10162 Species denotes SARS-COV-2 Tax:2697049
281 10184-10194 Species denotes SARS-COV-2 Tax:2697049
282 10296-10306 Species denotes SARS-COV-2 Tax:2697049
283 10607-10622 Species denotes new coronavirus Tax:2697049
284 10759-10770 Species denotes coronavirus Tax:11118
285 10828-10838 Species denotes SARS-COV-2 Tax:2697049
286 10962-10965 Species denotes CoV Tax:11118
287 11029-11039 Species denotes SARS-CoV-2 Tax:2697049
288 11066-11070 Species denotes CoVs Tax:11118
289 11118-11129 Species denotes unspecified Tax:32644
290 11205-11215 Species denotes SARS-COV-2 Tax:2697049
291 11266-11276 Species denotes SARS-COV-2 Tax:2697049
292 11342-11352 Species denotes SARS-COV-2 Tax:2697049
293 11366-11369 Species denotes rat Tax:10116
294 11545-11548 Species denotes rat Tax:10116
295 10590-10598 Disease denotes infected MESH:D007239
303 11644-11649 Species denotes human Tax:9606
304 11743-11748 Species denotes human Tax:9606
305 11771-11776 Species denotes human Tax:9606
306 11854-11859 Species denotes human Tax:9606
307 11888-11899 Species denotes chimpanzees Tax:9598
308 11860-11869 Disease denotes infection MESH:D007239
309 11873-11876 Disease denotes HIV MESH:D015658
316 11954-11963 Species denotes SARS-COVs Tax:694009
317 12025-12031 Species denotes humans Tax:9606
318 12049-12054 Species denotes human Tax:9606
319 12135-12143 Species denotes SARS-COV Tax:694009
320 12234-12244 Species denotes SARS-COV-2 Tax:2697049
321 12102-12111 Disease denotes infection MESH:D007239
324 12355-12361 Species denotes humans Tax:9606
325 12397-12406 Species denotes SARS-CoVs Tax:694009
329 12766-12772 Species denotes SARS-2 Tax:2697049
330 12820-12826 Species denotes SARS-2 Tax:2697049
331 12873-12879 Species denotes SARS-2 Tax:2697049
336 13074-13080 Species denotes SARS-2 Tax:2697049
337 13275-13285 Species denotes SARS-CoV-2 Tax:2697049
338 13406-13409 Species denotes rat Tax:10116
339 13467-13475 Species denotes SARS-CoV Tax:694009
343 13522-13526 Species denotes rats Tax:10116
344 13548-13554 Species denotes humans Tax:9606
345 13729-13734 Species denotes human Tax:9606
351 14715-14720 Species denotes human Tax:9606
352 14761-14766 Species denotes human Tax:9606
353 14826-14836 Species denotes SARS-COV-2 Tax:2697049
354 14467-14475 Disease denotes infected MESH:D007239
355 14813-14822 Disease denotes infection MESH:D007239
360 14913-14917 Species denotes rats Tax:10116
361 14996-14999 Species denotes rat Tax:10116
362 15017-15027 Species denotes SARS-COV-2 Tax:2697049
363 15003-15011 Disease denotes infected MESH:D007239
378 15113-15116 Species denotes rat Tax:10116
379 15176-15179 Species denotes rat Tax:10116
380 15287-15290 Species denotes rat Tax:10116
381 15346-15356 Species denotes SARS-COV-2 Tax:2697049
382 15385-15395 Species denotes SARS-COV-2 Tax:2697049
383 15421-15432 Species denotes Nipah virus Tax:121791
384 15627-15631 Species denotes rats Tax:10116
385 15696-15700 Species denotes rats Tax:10116
386 15735-15745 Species denotes SARS-COV-2 Tax:2697049
387 15787-15791 Species denotes rats Tax:10116
388 15801-15811 Species denotes SARS-COV-2 Tax:2697049
389 15915-15923 Species denotes SARS-CoV Tax:694009
390 15721-15729 Disease denotes infected MESH:D007239
391 15844-15852 Disease denotes infected MESH:D007239
396 15973-15983 Species denotes SARS-COV-2 Tax:2697049
397 16178-16192 Species denotes horseshoe bats Tax:49442
398 16338-16348 Species denotes SARS-COV-2 Tax:2697049
399 16100-16107 Species denotes Chinese Tax:8656
404 16573-16577 Species denotes CoVs Tax:11118
405 16619-16625 Species denotes SARS-2 Tax:2697049
406 16626-16634 Species denotes patients Tax:9606
407 16748-16758 Species denotes SARS-CoV-2 Tax:2697049
411 16884-16892 Species denotes patients Tax:9606
412 16908-16918 Species denotes SARS-CoV-2 Tax:2697049
413 16988-16994 Species denotes SARS-2 Tax:2697049
415 17390-17395 Species denotes human Tax:9606
424 18039-18042 Gene denotes Rp3 Gene:22924
425 18068-18071 Gene denotes Rf1 Gene:9617
426 17415-17429 Species denotes horseshoe bats Tax:49442
427 17492-17506 Species denotes horseshoe bats Tax:49442
428 17556-17570 Species denotes horseshoe bats Tax:49442
429 17659-17673 Species denotes horseshoe bats Tax:49442
430 17974-17983 Species denotes SARSr-CoV Tax:694009
431 18135-18145 Species denotes SARS-CoV-2 Tax:2697049
435 18744-18753 Species denotes SARS-CoVs Tax:694009
436 18818-18823 Species denotes human Tax:9606
437 18805-18814 Disease denotes infection MESH:D007239
450 18941-18947 Species denotes SARS-2 Tax:2697049
451 19101-19107 Species denotes SARS-2 Tax:2697049
452 19198-19204 Species denotes SARS-2 Tax:2697049
453 19266-19272 Species denotes SARS-2 Tax:2697049
454 19288-19293 Species denotes human Tax:9606
455 19294-19299 Species denotes human Tax:9606
456 19485-19491 Species denotes SARS-2 Tax:2697049
457 19492-19500 Species denotes patients Tax:9606
458 19553-19563 Species denotes SARS-CoV-2 Tax:2697049
459 19633-19639 Species denotes people Tax:9606
460 19348-19357 Disease denotes infection MESH:D007239
461 19451-19460 Disease denotes infection MESH:D007239
463 19846-19852 Species denotes SARS-2 Tax:2697049
471 19906-19916 Species denotes SARS-CoV-2 Tax:2697049
472 20108-20116 Species denotes patients Tax:9606
473 20506-20516 Species denotes SARS-CoV-2 Tax:2697049
474 20074-20082 Disease denotes infected MESH:D007239
475 20322-20330 Disease denotes infected MESH:D007239
476 20365-20373 Disease denotes infected MESH:D007239
477 20961-20970 Disease denotes infection MESH:D007239
487 21069-21079 Species denotes SARS-CoV-2 Tax:2697049
488 21092-21097 Species denotes human Tax:9606
489 21138-21143 Species denotes human Tax:9606
490 22025-22030 Species denotes human Tax:9606
491 22211-22216 Species denotes human Tax:9606
492 22351-22356 Species denotes human Tax:9606
493 21205-21225 Disease denotes SARS-CoV-2 infection MESH:C000657245
494 22031-22040 Disease denotes infection MESH:D007239
495 22192-22207 Disease denotes viral infection MESH:D001102
501 22800-22805 Species denotes human Tax:9606
502 22984-22993 Species denotes SARS-CoVs Tax:694009
503 23296-23305 Species denotes SARS-CoVs Tax:694009
504 22776-22796 Disease denotes SARS virus infection MESH:D045169
505 23347-23356 Disease denotes infection MESH:D007239
639 24616-24620 Gene denotes MAFF Gene:23764
640 24361-24368 Species denotes SARS)-2 Tax:2697049
641 24369-24377 Species denotes patients Tax:9606
642 24391-24427 Species denotes Wuhan seafood market pneumonia virus Tax:2697049
643 24807-24813 Species denotes SARS-2 Tax:2697049
644 24815-24840 Species denotes bat SARS-like coronavirus Tax:1508227
645 24849-24874 Species denotes bat-SARS-like coronavirus Tax:1508227
646 24894-24919 Species denotes bat SARS-like coronavirus Tax:1508227
647 24876-24882 Species denotes SL-CoV Tax:1508227
656 25013-25023 Species denotes SARS-CoV-2 Tax:2697049
657 25027-25033 Species denotes humans Tax:9606
658 25049-25059 Species denotes SARS-CoV-2 Tax:2697049
659 25134-25144 Species denotes SARS-CoV-2 Tax:2697049
660 25160-25166 Species denotes humans Tax:9606
661 25223-25227 Species denotes rats Tax:10116
662 25322-25332 Species denotes SARS-CoV-2 Tax:2697049
663 25336-25342 Species denotes humans Tax:9606
665 25354-25360 Species denotes SARS-2 Tax:2697049

2_test

Id Subject Object Predicate Lexical cue
32138266-25720466-49311434 2534-2535 25720466 denotes 3
32138266-14647384-49311435 2666-2667 14647384 denotes 4
32138266-24899185-49311436 2768-2769 24899185 denotes 5
32138266-15207054-49311437 4858-4859 15207054 denotes 6
32138266-31950516-49311438 4939-4940 31950516 denotes 7
32138266-20228108-49311439 5963-5965 20228108 denotes 15
32138266-22312351-49311440 5966-5968 22312351 denotes 16
32138266-24678699-49311441 6106-6108 24678699 denotes 17
32138266-31085641-49311442 6727-6729 31085641 denotes 18
32138266-23075143-49311443 7134-7136 23075143 denotes 20
32138266-29190287-49311444 7591-7593 29190287 denotes 22
32138266-29190287-49311445 7745-7747 29190287 denotes 22
32138266-24172901-49311446 7827-7829 24172901 denotes 23
32138266-26719272-49311447 8030-8032 26719272 denotes 24
32138266-30209269-49311448 8747-8749 30209269 denotes 25
32138266-32007145-49311449 9255-9257 32007145 denotes 27
32138266-32015508-49311450 9258-9260 32015508 denotes 28
32138266-31986261-49311451 9261-9263 31986261 denotes 29
32138266-24426305-49311452 9479-9481 24426305 denotes 30
32138266-30893947-49311453 9482-9484 30893947 denotes 31
32138266-30893947-49311454 9574-9576 30893947 denotes 31
32138266-23977431-49311455 10088-10090 23977431 denotes 32
32138266-31652964-49311456 10840-10842 31652964 denotes 35
32138266-30110630-49311457 11728-11730 30110630 denotes 42
32138266-22229120-49311458 11934-11936 22229120 denotes 44
32138266-23977431-49311459 12193-12195 23977431 denotes 32
32138266-31652964-49311460 12335-12337 31652964 denotes 35
32138266-31986264-49311461 12344-12346 31986264 denotes 45
32138266-28931730-49311462 13839-13841 28931730 denotes 48
32138266-28562607-49311463 14107-14109 28562607 denotes 49
32138266-24426305-49311464 15555-15557 24426305 denotes 30
32138266-23977431-49311465 15925-15927 23977431 denotes 32
32138266-24172901-49311466 16194-16196 24172901 denotes 23
32138266-31986264-49311467 16965-16967 31986264 denotes 45
32138266-20071579-49311468 18091-18093 20071579 denotes 53
32138266-30377506-49311469 18282-18284 30377506 denotes 54
32138266-32007145-49311470 19041-19043 32007145 denotes 27
32138266-20071579-49311471 19047-19049 20071579 denotes 53
T29460 2534-2535 25720466 denotes 3
T24474 2666-2667 14647384 denotes 4
T80132 2768-2769 24899185 denotes 5
T46583 4858-4859 15207054 denotes 6
T23565 4939-4940 31950516 denotes 7
T309 5963-5965 20228108 denotes 15
T89603 5966-5968 22312351 denotes 16
T12345 6106-6108 24678699 denotes 17
T50282 6727-6729 31085641 denotes 18
T44964 7134-7136 23075143 denotes 20
T71686 7591-7593 29190287 denotes 22
T70723 7745-7747 29190287 denotes 22
T26896 7827-7829 24172901 denotes 23
T63123 8030-8032 26719272 denotes 24
T44237 8747-8749 30209269 denotes 25
T91066 9255-9257 32007145 denotes 27
T47254 9258-9260 32015508 denotes 28
T16706 9261-9263 31986261 denotes 29
T68894 9479-9481 24426305 denotes 30
T15426 9482-9484 30893947 denotes 31
T21790 9574-9576 30893947 denotes 31
T78041 10088-10090 23977431 denotes 32
T25735 10840-10842 31652964 denotes 35
T73811 11728-11730 30110630 denotes 42
T93302 11934-11936 22229120 denotes 44
T18232 12193-12195 23977431 denotes 32
T28706 12335-12337 31652964 denotes 35
T6398 12344-12346 31986264 denotes 45
T79063 13839-13841 28931730 denotes 48
T42021 14107-14109 28562607 denotes 49
T35244 15555-15557 24426305 denotes 30
T52252 15925-15927 23977431 denotes 32
T21768 16194-16196 24172901 denotes 23
T13381 16965-16967 31986264 denotes 45
T28595 18091-18093 20071579 denotes 53
T21327 18282-18284 30377506 denotes 54
T90109 19041-19043 32007145 denotes 27
T19840 19047-19049 20071579 denotes 53

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 529-541 Body_part denotes human bodies http://purl.org/sig/ont/fma/fma305853
T2 1072-1084 Body_part denotes human bodies http://purl.org/sig/ont/fma/fma305853
T3 2659-2664 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T4 2761-2766 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T5 6276-6281 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T6 6332-6337 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T7 6345-6357 Body_part denotes nasal mucosa http://purl.org/sig/ont/fma/fma59684
T8 6351-6357 Body_part denotes mucosa http://purl.org/sig/ont/fma/fma85355
T9 6405-6410 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T10 6463-6468 Body_part denotes mucus http://purl.org/sig/ont/fma/fma66938
T11 6494-6499 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T12 6520-6525 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T13 6541-6549 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T14 6593-6598 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T15 6771-6782 Body_part denotes nasal mucus http://purl.org/sig/ont/fma/fma83688
T16 6798-6810 Body_part denotes nasal cavity http://purl.org/sig/ont/fma/fma54378
T17 6875-6898 Body_part denotes upper respiratory tract http://purl.org/sig/ont/fma/fma45661
T18 7797-7802 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T19 7820-7825 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183
T20 7872-7878 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T21 7972-7977 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T22 7990-7997 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T23 8409-8416 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T24 8417-8420 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T25 8431-8434 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T26 8541-8551 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T27 8947-8953 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T28 8991-8998 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T29 9051-9059 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T30 9225-9235 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T31 10662-10668 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T32 10990-10996 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T33 11168-11174 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T34 11719-11726 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T35 11873-11876 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T36 12248-12254 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T37 15529-15535 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T38 15537-15542 Body_part denotes urine http://purl.org/sig/ont/fma/fma12274
T39 15548-15553 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183
T40 16169-16174 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183
T41 16301-16306 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183
T42 17846-17852 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T43 21138-21150 Body_part denotes human bodies http://purl.org/sig/ont/fma/fma305853
T44 24481-24487 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T45 25265-25271 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T46 25273-25278 Body_part denotes urine http://purl.org/sig/ont/fma/fma12274
T47 25284-25289 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183
T48 25708-25711 Body_part denotes map http://purl.org/sig/ont/fma/fma67847

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6276-6281 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T2 6351-6357 Body_part denotes mucosa http://purl.obolibrary.org/obo/UBERON_0000344
T3 6463-6468 Body_part denotes mucus http://purl.obolibrary.org/obo/UBERON_0000912
T4 6771-6782 Body_part denotes nasal mucus http://purl.obolibrary.org/obo/UBERON_0002306
T5 6777-6782 Body_part denotes mucus http://purl.obolibrary.org/obo/UBERON_0000912
T6 6798-6810 Body_part denotes nasal cavity http://purl.obolibrary.org/obo/UBERON_0001707
T7 6875-6898 Body_part denotes upper respiratory tract http://purl.obolibrary.org/obo/UBERON_0001557
T8 6881-6898 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T9 7820-7825 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988
T10 13950-13959 Body_part denotes carcasses http://purl.obolibrary.org/obo/UBERON_0008979
T11 15529-15535 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T12 15537-15542 Body_part denotes urine http://purl.obolibrary.org/obo/UBERON_0001088
T13 15548-15553 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988
T14 16169-16174 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988
T15 16301-16306 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988
T16 21400-21405 Body_part denotes facet http://purl.obolibrary.org/obo/UBERON_4300038
T17 22252-22257 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T18 25265-25271 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T19 25273-25278 Body_part denotes urine http://purl.obolibrary.org/obo/UBERON_0001088
T20 25284-25289 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p26516s3 6268-6275 NegReg denotes reduced

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 39-43 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T2 122-155 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T3 157-161 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T4 233-241 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 233-237 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T6 246-254 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T7 246-250 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T8 741-745 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T9 1147-1157 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T10 1346-1350 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T11 1438-1442 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T12 1616-1649 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T13 1651-1655 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T14 1841-1849 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T15 1841-1845 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 1854-1862 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 1854-1858 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T18 1917-1921 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T19 2115-2123 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 2115-2119 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T21 2250-2261 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T22 2392-2400 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T23 2392-2396 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 2409-2413 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 2538-2546 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T26 2538-2542 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 2790-2798 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T28 2790-2794 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T29 2910-2919 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T30 3005-3013 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 3005-3009 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T32 3017-3025 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 3017-3021 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T34 3078-3086 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 3078-3082 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T36 3112-3116 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 3158-3166 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T38 3158-3162 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T39 3198-3207 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T40 3283-3292 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T41 3312-3336 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T42 3338-3346 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T43 3409-3418 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T44 3424-3428 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T45 3449-3453 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 3458-3462 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 3513-3522 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T48 3562-3570 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T49 3562-3566 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 3596-3604 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 3612-3616 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T52 4142-4146 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T53 4153-4157 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T54 4278-4282 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T55 4297-4301 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T56 4745-4749 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T57 4756-4760 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T58 4792-4796 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T59 4862-4866 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T60 6556-6571 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T61 6562-6571 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T62 7428-7432 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T63 7484-7488 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T64 7515-7523 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 7515-7519 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T66 7605-7609 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T67 7918-7922 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T68 8067-8075 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T69 8067-8071 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T70 8578-8582 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T71 8906-8914 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T72 8906-8910 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T73 9109-9117 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T74 9109-9113 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T75 9150-9158 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T76 9150-9154 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T77 9163-9171 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T78 9163-9167 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T79 9494-9498 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T80 9564-9572 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T81 9564-9568 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T82 9675-9683 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T83 9675-9679 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T84 9730-9738 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T85 9730-9734 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T86 10027-10045 Disease denotes SARS-CoV infection http://purl.obolibrary.org/obo/MONDO_0005091
T87 10027-10031 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T88 10036-10045 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T89 10060-10064 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T90 10152-10156 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T91 10184-10188 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T92 10296-10300 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T93 10828-10832 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T94 11029-11037 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T95 11029-11033 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T96 11205-11209 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T97 11266-11270 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T98 11342-11346 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T99 11860-11869 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T100 11954-11958 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T101 12102-12111 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T102 12135-12139 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T103 12160-12164 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T104 12234-12238 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T105 12397-12401 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T106 12557-12561 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T107 12649-12653 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T108 12766-12770 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T109 12820-12824 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T110 12873-12877 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T111 13074-13078 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T112 13275-13283 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T113 13275-13279 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T114 13467-13475 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 13467-13471 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T116 14813-14822 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T117 14826-14830 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T118 15017-15021 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T119 15346-15350 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T120 15385-15389 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T121 15735-15739 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T122 15801-15805 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T123 15915-15923 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T124 15915-15919 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T125 15973-15977 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T126 16145-16149 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T127 16338-16342 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T128 16619-16623 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T129 16748-16756 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T130 16748-16752 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T131 16908-16916 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T132 16908-16912 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T133 16988-16992 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T134 18135-18143 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T135 18135-18139 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T136 18744-18748 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T137 18805-18814 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T138 18941-18945 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T139 19101-19105 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T140 19198-19202 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T141 19266-19270 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T142 19348-19357 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T143 19451-19460 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T144 19485-19489 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T145 19553-19561 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T146 19553-19557 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T147 19779-19783 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T148 19846-19850 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T149 19906-19914 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T150 19906-19910 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T151 20506-20514 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T152 20506-20510 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T153 20961-20970 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T154 21054-21058 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T155 21069-21077 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T156 21069-21073 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T157 21205-21213 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T158 21205-21209 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T159 21216-21225 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T160 21339-21343 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T161 21467-21471 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T162 22031-22040 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T163 22192-22207 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T164 22198-22207 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T165 22670-22674 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T166 22776-22780 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T167 22781-22796 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T168 22787-22796 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T169 22918-22922 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T170 22984-22988 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T171 23221-23225 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T172 23296-23300 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T173 23347-23356 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T174 24326-24359 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T175 24361-24365 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T176 24412-24421 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T177 24807-24811 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T178 24819-24823 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T179 24853-24857 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T180 24898-24902 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T181 25013-25021 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T182 25013-25017 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T183 25049-25057 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T184 25049-25053 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T185 25134-25142 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T186 25134-25138 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T187 25322-25330 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T188 25322-25326 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T189 25354-25358 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 290-297 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T2 443-450 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T3 529-534 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T4 690-691 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 710-714 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T6 914-918 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T7 954-957 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T8 979-986 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T9 1033-1038 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T10 1072-1077 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T11 1141-1146 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T12 1795-1796 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 2149-2154 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T14 2210-2222 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T15 2247-2248 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 2627-2628 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 2653-2664 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T18 2730-2731 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 2755-2766 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T20 2951-2954 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T21 2972-2973 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 3132-3133 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 3209-3212 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T24 3524-3527 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T25 3571-3576 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2”. A
T26 4045-4052 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T27 4187-4188 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 4408-4409 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 4426-4427 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 4576-4577 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 4628-4633 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T32 4634-4644 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T33 4691-4695 http://purl.obolibrary.org/obo/CLO_0009609 denotes wish
T34 5097-5098 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 5137-5142 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T36 5509-5511 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T37 5947-5952 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T38 6005-6010 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T39 6025-6026 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 6045-6050 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T41 6071-6072 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 6154-6159 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T43 6219-6225 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T44 6276-6281 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T45 6276-6281 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T46 6332-6337 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T47 6351-6357 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
T48 6405-6410 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T49 6418-6424 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T50 6435-6440 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T51 6487-6493 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T52 6494-6499 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T53 6514-6525 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T54 6534-6540 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T55 6593-6598 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T56 6625-6630 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T57 6727-6729 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T58 6804-6810 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity
T59 6913-6918 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T60 7075-7076 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 7312-7313 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 7373-7378 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T63 7444-7451 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat was
T64 7465-7466 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 7524-7529 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T66 7556-7560 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T67 7564-7565 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 7591-7593 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T69 7667-7671 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T70 7709-7710 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T71 7745-7747 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T72 7789-7802 http://purl.obolibrary.org/obo/CLO_0051719 denotes Vero E6 cells
T73 7816-7819 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T74 7845-7850 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T75 7902-7907 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T76 7972-7977 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T77 8110-8114 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T78 8145-8149 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T79 8156-8157 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 8178-8184 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T81 8263-8267 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T82 8329-8330 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T83 8356-8360 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T84 8385-8386 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T85 8492-8495 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T86 8512-8515 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T87 8566-8571 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T88 8595-8602 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T89 8656-8661 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T90 8699-8705 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brains
T91 8699-8705 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brains
T92 8767-8771 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T93 8773-8777 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T94 8871-8877 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T95 8879-8880 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T96 8917-8920 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T97 8965-8968 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T98 9077-9082 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T99 9189-9190 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T100 9291-9298 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T101 9357-9361 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T102 9365-9371 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T103 9417-9422 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T104 9472-9477 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T105 9545-9546 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T106 9632-9636 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T107 9758-9765 http://purl.obolibrary.org/obo/NCBITaxon_9627 denotes red fox
T108 9779-9784 http://purl.obolibrary.org/obo/UBERON_0007688 denotes field
T109 9805-9811 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes ferret
T110 9890-9895 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T111 9943-9947 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T112 9977-9982 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T113 10049-10055 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T114 10164-10165 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T115 10195-10198 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T116 10339-10340 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T117 10492-10493 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T118 10528-10530 http://purl.obolibrary.org/obo/CLO_0009141 denotes St
T119 10528-10530 http://purl.obolibrary.org/obo/CLO_0050980 denotes St
T120 10642-10644 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T121 10647-10648 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T122 10840-10842 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T123 11041-11043 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T124 11139-11151 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T125 11277-11282 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T126 11395-11401 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T127 11469-11472 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T128 11493-11497 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T129 11602-11609 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T130 11627-11628 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T131 11644-11656 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T132 11682-11683 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T133 11743-11755 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T134 11759-11760 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T135 11771-11776 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T136 11835-11836 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T137 11854-11859 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T138 11888-11899 http://purl.obolibrary.org/obo/NCBITaxon_9596 denotes chimpanzees
T139 11975-11976 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T140 12025-12031 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T141 12049-12054 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T142 12055-12065 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T143 12071-12076 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T144 12077-12080 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T145 12198-12205 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T146 12296-12300 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T147 12355-12361 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T148 12410-12411 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T149 12500-12507 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T150 12984-12989 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T151 13014-13015 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T152 13103-13104 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T153 13191-13195 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T154 13243-13248 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T155 13510-13514 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T156 13539-13544 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T157 13548-13554 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T158 13646-13653 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T159 13729-13741 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T160 13743-13747 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Bats
T161 13839-13841 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T162 13915-13922 http://purl.obolibrary.org/obo/PR_000001318 denotes selling
T163 13934-13941 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T164 13943-13949 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes Animal
T165 14005-14009 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T166 14011-14015 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Bats
T167 14161-14165 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T168 14236-14239 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T169 14384-14388 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Bats
T170 14452-14457 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T171 14541-14548 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T172 14640-14641 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T173 14715-14727 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T174 14761-14766 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T175 14784-14791 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T176 15057-15060 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T177 15149-15153 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T178 15366-15370 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T179 15427-15432 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T180 15465-15468 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T181 15487-15491 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T182 15504-15509 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T183 15513-15520 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T184 15598-15599 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T185 15746-15751 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T186 15812-15817 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T187 16032-16035 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T188 16138-16139 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T189 16188-16192 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T190 16230-16234 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T191 16246-16251 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T192 16324-16328 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T193 16349-16354 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T194 16406-16411 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T195 16522-16526 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T196 16665-16666 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T197 16713-16714 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T198 16728-16729 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T199 16814-16821 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T200 16881-16883 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T201 16965-16967 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T202 17009-17013 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T203 17053-17055 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T204 17071-17075 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T205 17094-17095 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T206 17125-17132 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T207 17136-17140 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T208 17257-17264 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T209 17390-17402 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T210 17404-17405 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T211 17425-17429 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T212 17473-17480 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T213 17502-17506 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T214 17566-17570 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T215 17595-17602 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T216 17629-17637 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T217 17669-17673 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T218 17758-17763 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T219 17856-17861 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T220 17873-17877 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T221 18029-18031 http://purl.obolibrary.org/obo/CLO_0008812 denotes Rh
T222 18116-18117 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T223 18183-18186 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T224 18217-18221 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T225 18354-18355 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T226 18392-18396 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T227 18510-18511 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T228 18536-18537 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T229 18556-18560 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T230 18568-18572 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T231 18629-18634 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T232 18698-18705 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T233 18818-18830 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T234 18890-18895 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T235 19002-19003 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T236 19286-19287 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T237 19288-19293 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T238 19294-19299 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T239 19329-19330 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T240 19518-19519 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T241 19604-19609 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T242 19679-19680 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T243 19988-19993 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T244 20278-20285 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T245 20338-20345 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T246 20539-20544 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T247 20747-20748 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T248 21080-21083 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T249 21092-21097 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T250 21127-21132 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T251 21138-21143 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T252 21242-21243 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T253 21392-21393 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T254 21655-21660 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T255 21874-21881 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T256 21883-21884 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T257 22025-22030 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T258 22081-22092 http://purl.obolibrary.org/obo/OBI_0100026 denotes organically
T259 22081-22092 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organically
T260 22211-22223 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T261 22351-22356 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T262 22729-22730 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T263 22781-22786 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T264 22800-22812 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T265 22946-22950 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T266 23031-23038 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T267 23080-23081 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T268 23632-23633 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T269 24306-24311 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T270 24422-24427 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T271 24815-24818 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T272 24849-24852 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T273 24894-24897 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T274 24928-24931 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T275 24950-24951 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T276 25027-25033 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T277 25035-25039 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Bats
T278 25160-25166 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T279 25259-25263 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T280 25336-25342 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T281 25431-25432 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T282 25518-25519 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T283 25584-25585 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T284 25637-25641 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T285 25745-25746 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 477-488 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T2 1962-1967 Chemical denotes crown http://purl.obolibrary.org/obo/CHEBI_37409
T3 2060-2065 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T4 2067-2071 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T5 2073-2078 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T6 2306-2311 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T7 2312-2317 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T8 2353-2357 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T9 2358-2363 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T10 2585-2596 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T11 6541-6549 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T12 7621-7623 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T13 7764-7766 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T14 7929-7931 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T15 7990-7997 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T16 8124-8126 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T17 8409-8416 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T18 8483-8485 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T19 8496-8498 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T20 8516-8518 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T21 8541-8551 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T22 8726-8734 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T23 8991-8998 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T24 9051-9059 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T25 9225-9235 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T26 9225-9230 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T27 9231-9235 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T28 9753-9756 Chemical denotes cat http://purl.obolibrary.org/obo/CHEBI_32402
T29 11300-11305 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T30 13377-13382 Chemical denotes bases http://purl.obolibrary.org/obo/CHEBI_22695
T31 15300-15304 Chemical denotes base http://purl.obolibrary.org/obo/CHEBI_22695
T32 18029-18031 Chemical denotes Rh http://purl.obolibrary.org/obo/CHEBI_33359
T33 24725-24729 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T34 24876-24878 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T35 24932-24934 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 395-407 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T2 6227-6242 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immunity
T3 6556-6571 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T4 6685-6698 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T5 9988-9999 http://purl.obolibrary.org/obo/GO_0006810 denotes transported
T6 15823-15834 http://purl.obolibrary.org/obo/GO_0006810 denotes transported
T7 17609-17615 http://purl.obolibrary.org/obo/GO_1990277 denotes mating
T8 17609-17615 http://purl.obolibrary.org/obo/GO_0007618 denotes mating
T9 17609-17615 http://purl.obolibrary.org/obo/GO_0000747 denotes mating
T10 21635-21647 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T11 22192-22207 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-62 Sentence denotes Potential Factors Influencing Repeated SARS Outbreaks in China
T2 64-72 Sentence denotes Abstract
T3 73-257 Sentence denotes Within last 17 years two widespread epidemics of severe acute respiratory syndrome (SARS) occurred in China, which were caused by related coronaviruses (CoVs): SARS-CoV and SARS-CoV-2.
T4 258-437 Sentence denotes Although the origin(s) of these viruses are still unknown and their occurrences in nature are mysterious, some general patterns of their pathogenesis and epidemics are noticeable.
T5 438-542 Sentence denotes Both viruses utilize the same receptor—angiotensin-converting enzyme 2 (ACE2)—for invading human bodies.
T6 543-700 Sentence denotes Both epidemics occurred in cold dry winter seasons celebrated with major holidays, and started in regions where dietary consumption of wildlife is a fashion.
T7 701-919 Sentence denotes Thus, if bats were the natural hosts of SARS-CoVs, cold temperature and low humidity in these times might provide conducive environmental conditions for prolonged viral survival in these regions concentrated with bats.
T8 920-1101 Sentence denotes The widespread existence of these bat-carried or -released viruses might have an easier time in breaking through human defenses when harsh winter makes human bodies more vulnerable.
T9 1102-1255 Sentence denotes Once succeeding in making some initial human infections, spreading of the disease was made convenient with increased social gathering and holiday travel.
T10 1256-1364 Sentence denotes These natural and social factors influenced the general progression and trajectory of the SARS epidemiology.
T11 1365-1452 Sentence denotes However, some unique factors might also contribute to the origination of SARS in Wuhan.
T12 1453-1569 Sentence denotes These factors are discussed in different scenarios in order to promote more research for achieving final validation.
T13 1571-1573 Sentence denotes 1.
T14 1574-1586 Sentence denotes Introduction
T15 1587-1729 Sentence denotes Since 2002, two epidemics of severe acute respiratory syndrome (SARS) have originated from China, one in late 2002 and the other in late 2019.
T16 1730-1936 Sentence denotes The etiological agents of these epidemics have been confirmed as a new subset of coronaviruses (CoVs), namely, SARS-CoV and SARS-CoV-2 (Figure 1), respectively, for the 2002 and the 2019 SARS epidemics [1].
T17 1937-2001 Sentence denotes CoVs are named for their crown-like spikes on the viral surface.
T18 2002-2090 Sentence denotes They are classified into four main sub-groupings known as alpha, beta, gamma, and delta.
T19 2091-2223 Sentence denotes Before the emergence of SARS-CoV, four CoVs were known as human coronaviruses (HCoVs), i.e., CoVs capable of infecting human beings.
T20 2224-2368 Sentence denotes These four HCoVs cause a “common cold” and include HCoV-229E and HCoV-NL63 of the alpha group and HCoV-OC43 and HCoV-HKU1 of the beta group [2].
T21 2369-2537 Sentence denotes Since the discovery of SARS-CoV causing SARS in China in 2002 [2], another HCoV was identified in 2012 as MERS-CoV, causing Middle East respiratory syndrome (MERS) [3].
T22 2538-2669 Sentence denotes SARS-CoV differs from MERS-CoV because it uses angiotensin-converting enzyme 2 (ACE2) as a receptor for binding to human cells [4].
T23 2670-2771 Sentence denotes In contrast, MERS-CoV uses dipeptidyl peptidase 4 (DPP4) as a receptor for infecting human cells [5].
T24 2772-2879 Sentence denotes Phylogenetically, SARS-CoV and MERS-CoV are distinct and both are distant from other CoVs, including HCoVs.
T25 2880-3016 Sentence denotes The recent outbreak of “Wuhan pneumonia” in late 2019 in central China has been linked with a new CoV formally identified as SARS-CoV-2.
T26 3017-3172 Sentence denotes SARS-CoV-2 is not only phylogenetically closely related with SARS-CoV, an etiological agent of SARS, but also uses a same receptor, ACE2, as SARS-CoV does.
T27 3173-3479 Sentence denotes Thus, even though “Wuhan pneumonia” has been called with various other disease names such as “new coronavirus pneumonia (NCP)” and now as “coronavirus disease 2019 (COVID-19)”, we feel that it may be more appropriate to refer to “Wuhan pneumonia” as “SARS-2” and the previous SARS as “SARS-1” if necessary.
T28 3480-3574 Sentence denotes The etiological agent for “Wuhan pneumonia” has been changed from “2019-nCoV” to “SARS-CoV-2”.
T29 3575-3706 Sentence denotes A further change of “COVID-19” into “SARS-2” is logical and reasonable for streamlining taxonomy between disease agent and disease.
T30 3707-3964 Sentence denotes In this mini-review, we evaluate natural and social factors influencing both 2002 and 2019 SARSs in order to understand some common epidemiological features that may be beneficial for controlling the ongoing epidemic and also for preventing future outbreak.
T31 3965-4101 Sentence denotes This comprehensive knowledge is also helpful for searching the origin(s) of the viruses and for elucidating their initial occurrence(s).
T32 4103-4105 Sentence denotes 2.
T33 4106-4159 Sentence denotes Common Epidemiological Features for SARS-1 and SARS-2
T34 4160-4312 Sentence denotes It is amazing that, within a short time span of less than 17 years, two similar epidemic outbreaks occurred in China: SARS-1 in 2002 and SARS-2 in 2019.
T35 4313-4567 Sentence denotes Although identification of viral origin(s) is very critical for understanding these epidemics, a study comparing a wide variety of natural and social factors potentially influencing the progression and the trajectory of these epidemics is also important.
T36 4568-4763 Sentence denotes Through a comparative analysis of environmental factors and human activities in these two serious public health events, we wish to find some common ground for the occurrence of SARS-1 and SARS-2.
T37 4765-4769 Sentence denotes 2.1.
T38 4770-4791 Sentence denotes Environmental Factors
T39 4792-4861 Sentence denotes SARS-1 broke out in Foshan, Guangdong Province, in November 2002 [6].
T40 4862-4942 Sentence denotes SARS-2 started in Wuhan in Hubei Province no later than early December 2019 [7].
T41 4943-5062 Sentence denotes In China, November and December are winter months, and are the coldest months of the year in these two locations [8,9].
T42 5063-5152 Sentence denotes Cold temperature usually provides a conducive environmental condition for virus survival.
T43 5153-5267 Sentence denotes In addition to this, we also noticed that severe drought occurred in both locations at the times of the outbreaks.
T44 5268-5340 Sentence denotes The annual rainfall in Foshan in December 2002 nearly reached 0 mm [10].
T45 5341-5513 Sentence denotes In fact, drought occurred in the whole of Guangdong Province that year, causing more than 1300 reservoirs drying up and 286,000 hectares of farmland suffering drought [11].
T46 5514-5647 Sentence denotes Coincidentally, Wuhan also suffered its worst drought in nearly 40 years, with precipitation of only 5.5 mm in December 2019 [12,13].
T47 5648-5875 Sentence denotes These drought conditions were rare for both locations as their average annual precipitations are greater than 1100 mm [8,9], which are higher than the global average annual rainfall of 990 mm, of which 715 mm is over land [14].
T48 5876-5970 Sentence denotes Cold, dry conditions are more conducive than cold conditions alone for virus survival [15,16].
T49 5971-6110 Sentence denotes During the cold winter, air-dried virus particles are a dangerous form of virus, which survives for a long period of time in airflows [17].
T50 6111-6243 Sentence denotes Besides providing conducive conditions for virus survival and spreading, winter cold conditions also damper humans’ innate immunity.
T51 6244-6358 Sentence denotes Cold temperatures cause reduced blood supply and thus the decreased provision of immune cells to the nasal mucosa.
T52 6359-6500 Sentence denotes Low humidity can reduce the capacity of cilia cells in the airway to remove virus particles and secrete mucus as well as repair airway cells.
T53 6501-6640 Sentence denotes In addition, human cells release signal proteins after viral infection to alert neighboring cells to consider the danger of virus invasion.
T54 6641-6731 Sentence denotes However, in low-humidity environments, this innate immune defense system is impaired [18].
T55 6732-6933 Sentence denotes More seriously, low humidity can cause nasal mucus to become dry; nasal cavity lining to become fragile, or even ruptured; and make the entire upper respiratory tract vulnerable to virus invasion [19].
T56 6934-7043 Sentence denotes The environmental situation of another coronavirus outbreak also seems to support the above-mentioned theory.
T57 7044-7138 Sentence denotes MERS-CoV was first detected in a patient living in Jeddah, Saudi Arabia, in June of 2012 [20].
T58 7139-7250 Sentence denotes The annual rainfall in Jeddah is low at 61mm, and there was no rain at all in June of that year in Jeddah [21].
T59 7251-7399 Sentence denotes Therefore, relative to temperature, low humidity seems to be a more critical environmental factor influencing outbreak of human coronavirus disease.
T60 7401-7405 Sentence denotes 2.2.
T61 7406-7418 Sentence denotes Natural Host
T62 7419-7494 Sentence denotes For both SARS outbreaks, bat was suspected as a natural host for SARS-CoVs.
T63 7495-7595 Sentence denotes It was claimed that SARS-CoV virus originated from horseshoe bats in a cave of Yunnan Province [22].
T64 7596-7749 Sentence denotes In 2005, SARS-like COVs (SL-CoVs) were found in wild Chinese horseshoe bats (Rhinolophus sinicus) collected from a cave in Yunnan Province of China [22].
T65 7750-7831 Sentence denotes In 2013, live SL-CoV was isolated from Vero E6 cells incubated in bat feces [23].
T66 7832-7928 Sentence denotes The isolated virus showed more than 95% genome sequence identity with human and civet SARS-CoVs.
T67 7929-8034 Sentence denotes SL-CoV possesses the ability to infiltrate cells using its S protein to combine with ACE2 receptors [24].
T68 8035-8235 Sentence denotes This observation indicated that SARS-CoV originated from Chinese horseshoe bats and that SL-CoV isolated from bats poses a potential threat to humans without the involvement of any intermediate hosts.
T69 8236-8328 Sentence denotes Between 2015 and 2017, 334 bats were collected from Zhoushan city, Zhejiang Province, China.
T70 8329-8453 Sentence denotes A total of 26.65% of those bats were detected as having a conserved coronaviral protein RNA-dependent RNA polymerase (RdRp).
T71 8454-8588 Sentence denotes Full genomic analyses of two SL-CoVs (bat-SL-CoV ZC45 and bat-SL-CoV ZXC21) showed 81% nucleotide identity with human/civet SARS CoVs.
T72 8589-8751 Sentence denotes These viruses reproduced and caused disease in suckling rats, with virus-like particles being observed in the brains of suckling rats by electron microscopy [25].
T73 8752-8878 Sentence denotes Thus, prior to 2018, bats collected in some areas of China have been shown to carry CoVs capable of directly infecting humans.
T74 8879-8981 Sentence denotes A recent study showed that SARS-CoV-2 has 96% homology at the whole genome level with bat coronavirus.
T75 8982-9123 Sentence denotes Pairwise protein sequence analysis of seven conserved non-structural proteins showed that this virus belongs to the species of SARS-CoV [26].
T76 9124-9265 Sentence denotes In phylogenetic analysis, SARS-CoV and SARS-CoV-2 not only share a common ancestor, but also have an amino acid identity of 82.3% [27,28,29].
T77 9267-9271 Sentence denotes 2.3.
T78 9272-9290 Sentence denotes Intermediate Hosts
T79 9291-9372 Sentence denotes Viruses often require intermediate hosts before transmitting from bats to humans.
T80 9373-9486 Sentence denotes For example, the intermediate host of Nipah virus is pig, and the intermediate host of MERS-CoV is camel [30,31].
T81 9487-9578 Sentence denotes During SARS-1 outbreak, civet was initially considered as a natural host for SARS-CoV [31].
T82 9579-9684 Sentence denotes Later it was redefined as an intermediate host after bats were claimed as the natural hosts for SARS-CoV.
T83 9685-9864 Sentence denotes In addition to civet, researchers also found SARS-CoV from domestic cat, red fox, Lesser rice field rat, goose, Chinese ferret-badger, and wild boar in Guangdong’s seafood market.
T84 9865-10092 Sentence denotes It was believed that the virus was transmitted to civet from Yunnan horseshoe bats, and civet cats carrying the virus were transported to Guangdong, which led to SARS-CoV infection on humans and SARS outbreak in Guangdong [32].
T85 10093-10163 Sentence denotes Currently, some intermediate hosts have been suspected for SARS-COV-2.
T86 10164-10245 Sentence denotes A study showed that SARS-COV-2 has the same codon usage bias as shown for snakes.
T87 10246-10312 Sentence denotes Therefore, snake may be the intermediate host for SARS-COV-2 [33].
T88 10313-10646 Sentence denotes However, David Robertson, a virologist from the University of Glasgow, United Kingdom, stated, “Nothing supports the invasion of snakes.” At the same time, Paulo Eduardo Brandão, a virologist from the University of St. Paul, also said, “There is no evidence that snakes can be infected by this new coronavirus and act as hosts” [34].
T89 10647-10844 Sentence denotes A study on the genome sequence of diseased pangolins smuggled from Malaysia to China found that pangolins carry coronavirus, suggesting that pangolins may be intermediate hosts for SARS-COV-2 [35].
T90 10845-11045 Sentence denotes Pangolins seized in anti-smuggling operations in Guangxi and Guangdong of southern China were detected with multiple CoV linages with 85.5–92.4% genome sequence similarity to those of SARS-CoV-2 [36].
T91 11046-11221 Sentence denotes More interestingly, CoVs collected from caged pangolin obtained from an unspecified research organization showed over 99% genome sequence identity to those of SARS-COV-2 [37].
T92 11222-11574 Sentence denotes Meanwhile, Nanshan Zhong, the leader of the SARS-COV-2 virus treatment expert group, predicted the intermediate host of SARS-COV-2 to be bamboo rat [38] on the basis of the animal distribution in Zhoushan, which is not only the natural habitat of bat-sl-CoVzc45-carrying bats, but also the natural habitat of cobra, bamboo rat, and pangolin [39,40,41].
T93 11576-11580 Sentence denotes 2.4.
T94 11581-11594 Sentence denotes Ultimate Host
T95 11595-11938 Sentence denotes Before viruses in wildlife make a jump to infect human beings, they usually accumulate a series of mutations in their viral genomes [42] and invade human beings as a result of human occupation of their normal ecosystem, as exemplified with a story of initial human infection by HIV carried by chimpanzees in rainforests of West Africa [43,44].
T96 11939-12032 Sentence denotes At the outset, SARS-COVs might have a species barrier before it can be transmitted to humans.
T97 12033-12112 Sentence denotes However, due to human activities, the virus has expanded its host of infection.
T98 12113-12197 Sentence denotes It was found that the SARS-COV responsible for SARS-1 in 2002 existed in civet [32].
T99 12198-12348 Sentence denotes Viruses phylogenetically similar to SARS-COV-2 in genome sequence have now being detected in wild bats [26], snakes [33], and pangolins [35,36,37,45].
T100 12349-12519 Sentence denotes Thus, humans might become unfortunate hosts for SARS-CoVs as a result of some inappropriate interactions with wildlife and thus exposure to unfriendly viruses (Figure 2).
T101 12521-12523 Sentence denotes 3.
T102 12524-12563 Sentence denotes Potential Outbreak Scenarios for SARS-2
T103 12564-12782 Sentence denotes Having identified some relevant natural and social factors common for affecting both SARS epidemics, it is also necessary to discuss if variations in these factors contributed to the unique outbreak of SARS-2 in Wuhan.
T104 12783-12935 Sentence denotes Because many factors confounding the SARS-2 epidemic are still unknown, we herein discuss SARS-2 outbreak in Wuhan (Figure 3) under different scenarios.
T105 12937-12941 Sentence denotes 3.1.
T106 12942-12989 Sentence denotes Single Outbreak Site and Single Source of Virus
T107 12990-13162 Sentence denotes An early guess and also a dominant view expressed in published reports assumes that SARS-2 outbreak started from a single site in Wuhan, namely, Huanan Seafood Market [46].
T108 13163-13331 Sentence denotes However, the only source of bats that have been publicly identified as carrying virus phylogenetically close to SARS-CoV-2 is far away from Wuhan in Zhoushan, Zhejiang.
T109 13332-13484 Sentence denotes Zhoushan is also one of the largest breeding bases in Zhejiang for bamboo rat, which is suspected as one of the intermediate hosts for SARS-CoV [38,47].
T110 13485-13742 Sentence denotes Thus, in order for these bats and/or rats to pass the virus to humans, they must have first been able to migrate or be moved to Wuhan and also must have carried viruses that actually achieved mutations for affording the capability of infecting human beings.
T111 13743-13843 Sentence denotes Bats have an ability to migrate more than 1000 kilometers and tend to fly to insect-rich areas [48].
T112 13844-13942 Sentence denotes Abundant insects are often found in wildlife market areas due to their selling of various animals.
T113 13943-14010 Sentence denotes Animal carcasses also make these places suitable habitats for bats.
T114 14011-14111 Sentence denotes Bats are also attracted to artificial green lights and tend to gather around green light areas [49].
T115 14112-14305 Sentence denotes In agreement with these natural characteristics, bats have been found to inhabit locations near Yangtze River Bridge, which has rows of green lights that are tuned on for all of the night-time.
T116 14306-14383 Sentence denotes Incidentally, Huanan Seafood Market is only 20 minutes away from this bridge.
T117 14384-14509 Sentence denotes Bats gathered near the Yangtze River Bridge might have released the virus and even infected intermediate hosts for some time.
T118 14510-14683 Sentence denotes The cold and dry winter helped viruses to survive in the environment and eventually found some ways to cross the species barrier, a phenomenon known as “viral chatter” [50].
T119 14684-14849 Sentence denotes The increased vulnerability of human beings in winter time and the increased human exposure to wild animals during holidays made infection to SARS-COV-2 more likely.
T120 14850-14943 Sentence denotes At present, there is no evidence to prove the source of bamboo rats in Huanan Seafood Market.
T121 14944-15028 Sentence denotes Therefore, there are two possible places for bamboo rat be infected with SARS-COV-2.
T122 15029-15081 Sentence denotes The first site might be the bat habitat in Zhoushan.
T123 15082-15236 Sentence denotes Due to the promotion of bamboo rat breeding by Huanong Brothers in 2018, the amount of bamboo rat breeding and market demand increased significantly [51].
T124 15237-15371 Sentence denotes Since the market demand increases, the new bamboo rat breeding base may not be far from the local habitat of SARS-COV-2-carrying bats.
T125 15372-15559 Sentence denotes The model of SARS-COV-2 transmission, similar to Nipah virus, is that farms are built around bat habitats, causing bats to pass the virus to animals through saliva, urine, and feces [30].
T126 15560-15752 Sentence denotes At the same time, because Zhejiang is a natural habitat for bamboo rats, it is possible that some farms directly introduced wild bamboo rats, which were already infected with SARS-COV-2 virus.
T127 15753-15929 Sentence denotes For the above reasons, the bamboo rats carrying SARS-COV-2 virus were transported from the infected place to the incident site in the same way that civets spread SARS-CoV [32].
T128 15930-16046 Sentence denotes The second site is Wuhan, the place of the SARS-COV-2 outbreak, and it is also the end point for some bat migration.
T129 16047-16198 Sentence denotes Zhengli Shi’s team from Wuhan Institute of Virology, Chinese Academy of Sciences, isolated a live SARS-like strain in the feces of horseshoe bats [23].
T130 16199-16307 Sentence denotes This suggests that the way the bats spread the virus is not only via direct contact, but also through feces.
T131 16308-16457 Sentence denotes Therefore, when bats carrying SARS-COV-2 virus forage at Huanan Seafood Market, they may pass the virus directly or indirectly to intermediate hosts.
T132 16458-16635 Sentence denotes However, to confirm this scenario, it is necessary to find wild bats in Wuhan and its neighboring areas that carry CoVs identical to those isolated from various SARS-2 patients.
T133 16636-16759 Sentence denotes It is also necessary to find a mechanism for the very quick outbreak in such a wide area by a natural source of SARS-CoV-2.
T134 16761-16765 Sentence denotes 3.2.
T135 16766-16821 Sentence denotes Multiple Outbreak Sites and Multiple Sources of Viruses
T136 16822-16969 Sentence denotes Epidemiological investigations showed that 13 of the first 41 patients diagnosed with SARS-CoV-2 had nothing to do with Huanan Seafood Market [45].
T137 16970-17057 Sentence denotes Another survey of SARS-2 found that no bats were on sale in Huanan Seafood Market [52].
T138 17058-17252 Sentence denotes With so many bats concentrated into a local area, the spreading of viruses by bats might be much wider than just being restricted to one wildlife trading place such as the Huanan Seafood Market.
T139 17253-17403 Sentence denotes The viruses might have lived in this big “incubation bed” for some time and achieved some mutations before jumping on to the final hosts—human beings.
T140 17404-17541 Sentence denotes A study on horseshoe bats in Hong Kong and Guangdong showed that the viruses carried by horseshoe bats in these two places are different.
T141 17542-17638 Sentence denotes However, some horseshoe bats were found to carry two viruses after mating and foraging activity.
T142 17639-17810 Sentence denotes This indicates that horseshoe bats not only have the ability to migrate, but also the ability to promote the spread of virus within the same roost and from roost to roost.
T143 17811-17954 Sentence denotes In addition, sequencing the entire genome of virus carried by bats in multiple regions revealed frequent recombination among different strains.
T144 17955-18095 Sentence denotes For example, civet SARSr-CoV SZ3 recombination was detected between SARSr-Rh-BatCoV Rp3 from Guangxi, China, and Rf1 from Hubei, China [53].
T145 18096-18197 Sentence denotes Therefore, there is a possibility that SARS-CoV-2 spread from Zhoushan to Wuhan due to bat migration.
T146 18198-18286 Sentence denotes It turned out that bats are not only attracted by green lights but also red lights [54].
T147 18287-18385 Sentence denotes Along the Yangtze River there are also huge bridges decorated with a massive number of red lights.
T148 18386-18494 Sentence denotes Thus, bats migrating along the Yangtze River might be attracted by these red lights and be relocated nearby.
T149 18495-18561 Sentence denotes Wuhan might be a new habitation site for a massive number of bats.
T150 18562-18643 Sentence denotes These bats, coming from different locations, might carry different virus strains.
T151 18644-18831 Sentence denotes The separate evolution and the recombination of these viruses might lead to the creation of various SARS-CoVs capable of cross-species transmission and ultimate infection of human beings.
T152 18833-18837 Sentence denotes 3.3.
T153 18838-18895 Sentence denotes Multiple Outbreak Sites and Single Unique Source of Virus
T154 18896-19054 Sentence denotes Many observations have shown the outbreak of SARS-2 actually started from multiple sites, instead of just a single site, as originally reported [27,52,53,55].
T155 19055-19233 Sentence denotes In evaluating the epidemiological patterns of SARS-2 within Wuhan, surrounding Wuhan, and remote from Wuhan, it appears that the incidences of SARS-2 have some distinct patterns.
T156 19234-19461 Sentence denotes Although the remotely occurring SARS-2 usually have a human–human linkage and can be traced to a single source of infection, some Wuhan cases and the surrounding cases in Hubei Province still lack reliable sources of infection.
T157 19462-19564 Sentence denotes Amazingly, most of the SARS-2 patients can be traced to a single unique etiological agent, SARS-CoV-2.
T158 19565-19670 Sentence denotes How could this likely single source of virus quickly infect so many people in such large geographic area?
T159 19671-19754 Sentence denotes This is a question that is difficult to answer now, but must be answered in future.
T160 19756-19758 Sentence denotes 4.
T161 19759-19806 Sentence denotes Recommendations for SARS Control and Prevention
T162 19808-19812 Sentence denotes 4.1.
T163 19813-19861 Sentence denotes Control Measures for the Ongoing SARS-2 Epidemic
T164 19862-20093 Sentence denotes Although the origins and the occurrences of SARS-CoV-2 are both unclear, the control measures for the current epidemic should focus on immediate cut-off of transmission of the disease and through disinfection of infected locations.
T165 20094-20346 Sentence denotes Quarantine of patients (both confirmed and suspected), isolation of susceptible population, and protection of high-risk professions are necessary measures for reducing exposure to the viruses and eliminating the risk of getting infected by the viruses.
T166 20347-20415 Sentence denotes At the same time, infected locations must be adequately disinfected.
T167 20416-20560 Sentence denotes Areas that will be open to the public should be carefully surveilled for the existence of SARS-CoV-2 and be cleaned of the virus if it is found.
T168 20561-20743 Sentence denotes Modern communication methods should be effectively used for passing reliable information on the epidemic status, the treatment measures, and the self-protection skills, among others.
T169 20744-21011 Sentence denotes As a matter of fact, if fine-tuned and highly-effective internet control for “public opinions” can be turned into beneficial use of monitoring the “epidemic situation”, fighting against an even larger outbreak of any infection would be much easier and cost-effective.
T170 21013-21017 Sentence denotes 4.2.
T171 21018-21068 Sentence denotes Prevention Strategies for Potential SARS in Future
T172 21069-21192 Sentence denotes SARS-CoV-2 has entered human communities, and eliminating virus from human bodies does not means its eradication in nature.
T173 21193-21254 Sentence denotes The risk of SARS-CoV-2 infection will remain for a long time.
T174 21255-21344 Sentence denotes Thus, adequate cautions must be taken for safe-guarding against future outbreaks of SARS.
T175 21345-21503 Sentence denotes The prevention can be achieved by implementing a multi-facet system that considers both natural and social aspects of the SARS epidemiology discussed earlier.
T176 21504-21661 Sentence denotes For example, regular surveillance of viral status in nature should be carried out to monitor the variation/evolution and abundance/localization of the virus.
T177 21662-21760 Sentence denotes This information may be served as an early warning and used for preparation of potential vaccines.
T178 21761-21882 Sentence denotes The government should issue laws and policies to tighten protection of wildlife and prohibit consumption of wild animals.
T179 21883-22041 Sentence denotes A grass-roots and transparent reporting system should be established and put into public use for reporting any case of confirmed or suspected human infection.
T180 22042-22311 Sentence denotes The disease-reporting system should be organically synchronized with the meteorological system so that adverse environmental conditions conducive for viral infection on human beings can be forecasted and macro-scale preparations can be made in case an emergency occurs.
T181 22312-22582 Sentence denotes Finally, but not lastly, in developing human society including building massive constructions for residence and transportation, potential ecological impact on wildlife and possible consequences of breaking natural balance of the ecosystems should be carefully evaluated.
T182 22584-22586 Sentence denotes 5.
T183 22587-22598 Sentence denotes Conclusions
T184 22599-22813 Sentence denotes This mini-review evaluated the common epidemiological patterns of both SARS epidemics in China and identified cold, dry winter as a common environmental condition conducive for SARS virus infection to human beings.
T185 22814-22923 Sentence denotes Thus, meteorological information should be integrated into future forecast of potential outbreak of new SARS.
T186 22924-23177 Sentence denotes The identification of bats as very likely natural hosts for SARS-CoVs and consideration of some other wild animals as potential intermediate hosts leads to a prevention requirement of protecting natural ecosystem and prohibiting consumption of wildlife.
T187 23178-23409 Sentence denotes The presentation of different scenarios of SARS outbreaks points to some urgency in identifying the true origin(s) of SARS-CoVs and establishing more comprehensive anti-infection measures that will resist any kind of viral assault.
T188 23411-23426 Sentence denotes Acknowledgments
T189 23427-23587 Sentence denotes Thanks to the alumni of Tongji Medical College, Huazhong University of Science and Technology for their selfless help and Miss Tao’s suggestions for manuscript.
T190 23589-23609 Sentence denotes Author Contributions
T191 23610-23666 Sentence denotes All authors have made a contribution to this manuscript.
T192 23667-23725 Sentence denotes Z.S. designed, drafted, and edited the initial manuscript.
T193 23726-23774 Sentence denotes K.T. reviewed and edited the initial manuscript.
T194 23775-23812 Sentence denotes S.S.K. edited the initial manuscript.
T195 23813-23878 Sentence denotes G.H. conceptualized and designed the framework of the manuscript.
T196 23879-24006 Sentence denotes S.V.L. wrote the revision of the manuscript and brought many of his independently originated ideas into the revised manuscript.
T197 24007-24083 Sentence denotes All authors have read and agreed to the published version of the manuscript.
T198 24085-24092 Sentence denotes Funding
T199 24093-24191 Sentence denotes This work is supported in part by the National Natural Science Foundation of China under grant no.
T200 24192-24201 Sentence denotes 71964020.
T201 24203-24224 Sentence denotes Conflicts of Interest
T202 24225-24269 Sentence denotes The authors declare no conflict of interest.
T203 24271-24378 Sentence denotes Figure 1 Phylogenetic analysis of virus isolated from severe acute respiratory syndrome (SARS)-2 patients.
T204 24379-24615 Sentence denotes Sequence of Wuhan seafood market pneumonia virus isolate Wuhan-Hu-1 was used for comparing with whole genome sequence database from National Center for Biotechnology Information (NCBI) by using Basic Local Alignment Search Tool (BLAST).
T205 24616-24679 Sentence denotes MAFF (AIST) was used to align the first 100 matching sequences.
T206 24680-24770 Sentence denotes Phylogenetic trees were constructed by using MEGA X through neighbor-joining (NJ) methods.
T207 24771-24968 Sentence denotes According to the phylogenetic tree, SARS-2, bat SARS-like coronavirus isolate bat-SARS-like coronavirus (SL-CoV) ZC45, and bat SARS-like coronavirus isolate bat-SL-CoVZXC21 share a common ancestor.
T208 24969-25034 Sentence denotes Figure 2 Potential transmission routes for SARS-CoV-2 to humans.
T209 25035-25133 Sentence denotes Bats carrying SARS-CoV-2 were attracted by green or red lights and settled into insect-rich areas.
T210 25134-25290 Sentence denotes SARS-CoV-2 transmitted to humans directly or spread to intermediate hosts such as bamboo rats, snakes, and pangolins through bats’ saliva, urine, and feces.
T211 25291-25343 Sentence denotes Intermediate hosts transmitted SARS-CoV-2 to humans.
T212 25344-25485 Sentence denotes Figure 3 SARS-2 outbreak in Wuhan and its spreading into various places in China with a heavy impact on neighboring areas in Hubei Province.
T213 25486-25595 Sentence denotes The cases shown on maps reflect a snapshot of the epidemic on the day when Wuhan was placed under a lockdown.
T214 25596-25712 Sentence denotes Known and potential migration routes for bats are shown with solid and broken lines, respectively, on the China map.
T215 25713-25800 Sentence denotes The Yangtze River is shown with a green line in both maps for China and Hubei Province.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 2910-2919 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 3198-3207 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 3283-3292 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 3409-3418 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 3513-3522 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T6 24412-24421 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090