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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 88-135 Species denotes Severe Acute Respiratory Syndrome Coronavirus 2 Tax:2697049
8 232-254 Species denotes 2019 novel coronavirus Tax:2697049
9 271-318 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
10 320-330 Species denotes SARS-CoV-2 Tax:2697049
11 833-843 Species denotes SARS-COV-2 Tax:2697049
12 472-481 Disease denotes infection MESH:D007239
13 816-827 Disease denotes Coinfection MESH:D060085
25 1011-1028 Species denotes novel coronavirus Tax:2697049
26 1094-1141 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
27 1143-1153 Species denotes SARS-CoV-2 Tax:2697049
28 1162-1173 Species denotes Coronavirus Tax:11118
29 1330-1347 Species denotes novel coronavirus Tax:2697049
30 1581-1591 Species denotes SARS-CoV-2 Tax:2697049
31 2084-2091 Species denotes patient Tax:9606
32 927-942 Disease denotes 2019, pneumonia MESH:C000657245
33 1362-1386 Disease denotes coronavirus disease 2019 MESH:C000657245
34 1388-1396 Disease denotes COVID-19 MESH:C000657245
35 1653-1662 Disease denotes infection MESH:D007239
42 2718-2736 Gene denotes C-reactive protein Gene:1401
43 2172-2175 Species denotes boy Tax:9606
44 2191-2196 Disease denotes fever MESH:D005334
45 2233-2238 Disease denotes Fever MESH:D005334
46 2322-2330 Disease denotes COVID-19 MESH:C000657245
47 2472-2477 Disease denotes fever MESH:D005334
62 2758-2765 Species denotes patient Tax:9606
63 2930-2937 Species denotes patient Tax:9606
64 3297-3305 Species denotes patients Tax:9606
65 3336-3343 Species denotes patient Tax:9606
66 3474-3481 Species denotes patient Tax:9606
67 3511-3521 Species denotes SARS-CoV-2 Tax:2697049
68 3571-3581 Species denotes SARS-CoV-2 Tax:2697049
69 2791-2796 Disease denotes Fever MESH:D005334
70 2840-2851 Disease denotes A infection MESH:D007239
71 3014-3022 Disease denotes COVID-19 MESH:C000657245
72 3251-3260 Disease denotes pneumonia MESH:D011014
73 3311-3319 Disease denotes COVID-19 MESH:C000657245
74 3352-3361 Disease denotes pneumonia MESH:D011014
75 3609-3618 Disease denotes infection MESH:D007239
90 4370-4388 Gene denotes C-reactive protein Gene:1401
91 3781-3788 Species denotes patient Tax:9606
92 3824-3832 Species denotes patients Tax:9606
93 3850-3856 Species denotes people Tax:9606
94 3661-3666 Disease denotes fever MESH:D005334
95 3731-3736 Disease denotes Fever MESH:D005334
96 3838-3846 Disease denotes COVID-19 MESH:C000657245
97 3965-3970 Disease denotes fever MESH:D005334
98 4005-4025 Disease denotes Respiratory symptoms MESH:D012818
99 4048-4058 Disease denotes dry throat MESH:D010608
100 4088-4093 Disease denotes cough MESH:D003371
101 4162-4168 Disease denotes nausea MESH:D009325
102 4170-4178 Disease denotes vomiting MESH:D014839
103 4184-4192 Disease denotes diarrhea MESH:D003967
113 4787-4797 Species denotes SARS-CoV-2 Tax:2697049
114 4829-4839 Species denotes SARS-CoV-2 Tax:2697049
115 4901-4911 Species denotes SARS-CoV-2 Tax:2697049
116 5003-5010 Species denotes patient Tax:9606
117 4424-4433 Disease denotes emphysema MESH:D004646
118 4535-4550 Disease denotes viral pneumonia
119 4641-4650 Disease denotes pneumonia MESH:D011014
120 4660-4668 Disease denotes infected MESH:D007239
121 5038-5046 Disease denotes COVID-19 MESH:C000657245
126 5181-5191 Species denotes SARS-CoV-2 Tax:2697049
127 5168-5177 Disease denotes infection MESH:D007239
128 5638-5647 Disease denotes infection MESH:D007239
129 5729-5740 Disease denotes coinfection MESH:D060085
134 6410-6418 Species denotes patients Tax:9606
135 6084-6092 Disease denotes COVID-19 MESH:C000657245
136 6424-6432 Disease denotes COVID-19 MESH:C000657245
137 6571-6591 Disease denotes SARS-CoV-2 infection MESH:C000657245
149 6767-6775 Species denotes patients Tax:9606
150 7901-7909 Species denotes patients Tax:9606
151 6781-6789 Disease denotes COVID-19 MESH:C000657245
152 6968-6976 Disease denotes COVID-19 MESH:C000657245
153 7198-7207 Disease denotes pneumonia MESH:D011014
154 7339-7347 Disease denotes COVID-19 MESH:C000657245
155 7794-7803 Disease denotes Pneumonia MESH:D011014
156 7838-7847 Disease denotes pneumonia MESH:D011014
157 7932-7940 Disease denotes COVID-19 MESH:C000657245
158 8130-8138 Disease denotes COVID-19 MESH:C000657245
159 8255-8263 Disease denotes COVID-19 MESH:C000657245
171 8479-8497 Gene denotes C-reactive protein Gene:1401
172 8687-8705 Gene denotes C-reactive protein Gene:1401
173 8370-8378 Species denotes patients Tax:9606
174 8380-8387 Species denotes Patient Tax:9606
175 8419-8429 Species denotes SARS-CoV-2 Tax:2697049
176 8583-8590 Species denotes patient Tax:9606
177 8402-8410 Disease denotes infected MESH:D007239
178 8549-8557 Disease denotes COVID-19 MESH:C000657245
179 8802-8811 Disease denotes infection MESH:D007239
180 8830-8850 Disease denotes SARS-CoV-2 infection MESH:C000657245
181 8860-8871 Disease denotes coinfection MESH:D060085
185 9022-9042 Disease denotes SARS-CoV-2 infection MESH:C000657245
186 9156-9164 Disease denotes COVID-19 MESH:C000657245
187 9255-9264 Disease denotes infection MESH:D007239
201 9424-9431 Species denotes patient Tax:9606
205 9545-9552 Species denotes patient Tax:9606
206 9615-9631 Disease denotes upper lung lobes MESH:D012141
207 9814-9823 Disease denotes pneumonia MESH:D011014
209 10128-10135 Species denotes patient Tax:9606
211 10458-10467 Disease denotes pneumonia MESH:D011014

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 2490-2494 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T2 2586-2595 Body_part denotes leukocyte http://purl.org/sig/ont/fma/fma62852
T3 2615-2625 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T4 2681-2692 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T5 2729-2736 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T6 3180-3185 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T7 3420-3425 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T8 3443-3449 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T9 3684-3688 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T10 3978-3982 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T11 4052-4058 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T12 4095-4101 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T13 4119-4123 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T14 4236-4245 Body_part denotes leukocyte http://purl.org/sig/ont/fma/fma62852
T15 4266-4276 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T16 4333-4344 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T17 4381-4388 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T18 4408-4413 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T19 4448-4453 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T20 4496-4512 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T21 4707-4712 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T22 4737-4743 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T23 6389-6394 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T24 6683-6688 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T25 6805-6810 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T26 6925-6930 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T27 7211-7216 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T28 8454-8465 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T29 8490-8497 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T30 8662-8673 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T31 8698-8705 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T32 9392-9397 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T33 9621-9625 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T34 9690-9699 Body_part denotes left lung http://purl.org/sig/ont/fma/fma7310
T35 9881-9885 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T36 9929-9934 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T37 9936-9952 Body_part denotes right upper lobe http://purl.org/sig/ont/fma/fma7333
T38 9954-9971 Body_part denotes right middle lobe http://purl.org/sig/ont/fma/fma7383
T39 9973-9989 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T40 9991-10006 Body_part denotes left upper lobe http://purl.org/sig/ont/fma/fma7370
T41 10012-10027 Body_part denotes left lower lobe http://purl.org/sig/ont/fma/fma7371
T42 10109-10114 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T43 10261-10277 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T44 10336-10360 Body_part denotes lower lobe of right lung http://purl.org/sig/ont/fma/fma7337
T45 10525-10529 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T46 10573-10578 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T47 10580-10596 Body_part denotes right upper lobe http://purl.org/sig/ont/fma/fma7333
T48 10598-10615 Body_part denotes right middle lobe http://purl.org/sig/ont/fma/fma7383
T49 10617-10633 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T50 10635-10650 Body_part denotes left upper lobe http://purl.org/sig/ont/fma/fma7370
T51 10656-10671 Body_part denotes left lower lobe http://purl.org/sig/ont/fma/fma7371

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 3443-3449 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T2 4052-4058 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T3 4095-4101 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T4 4119-4123 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T5 4408-4413 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T6 4508-4512 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T7 4737-4743 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T8 6389-6394 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T9 6683-6688 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T10 6805-6810 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 6925-6930 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T12 7211-7216 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T13 9392-9397 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T14 9621-9625 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 9690-9699 Body_part denotes left lung http://purl.obolibrary.org/obo/UBERON_0002168
T16 9695-9699 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T17 9881-9885 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T18 9948-9952 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T19 9967-9971 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T20 9985-9989 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T21 10002-10006 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T22 10023-10027 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T23 10109-10114 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T24 10273-10277 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T25 10336-10360 Body_part denotes lower lobe of right lung http://purl.obolibrary.org/obo/UBERON_0002171
T26 10342-10346 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T27 10350-10360 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T28 10356-10360 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T29 10525-10529 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T30 10592-10596 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T31 10611-10615 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T32 10629-10633 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T33 10646-10650 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T34 10667-10671 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p26083s15 8444-8453 NegReg denotes decreased
p26083s16 8454-8465 CPA denotes lymphocytes
p26083s18 8470-8478 PosReg denotes elevated
p26083s19 8479-8480 MPA denotes C

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 88-135 Disease denotes Severe Acute Respiratory Syndrome Coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T2 271-318 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T3 271-304 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T4 320-328 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 472-481 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T6 833-837 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T7 933-942 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T8 1094-1141 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T9 1094-1127 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T10 1143-1151 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 1362-1386 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T12 1388-1396 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 1581-1589 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 1653-1662 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 2322-2330 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 2830-2839 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T17 2842-2851 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 3014-3022 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T19 3108-3117 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T20 3251-3260 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T21 3311-3319 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 3352-3361 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T23 3511-3519 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T24 3571-3579 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T25 3609-3618 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T26 3838-3846 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 4113-4123 Disease denotes runny nose http://purl.obolibrary.org/obo/MONDO_0003014
T28 4184-4192 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T29 4424-4433 Disease denotes emphysema http://purl.obolibrary.org/obo/MONDO_0004849
T30 4535-4550 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T31 4541-4550 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T32 4641-4650 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T33 4787-4795 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T34 4829-4837 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 4901-4909 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T36 5038-5046 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 5168-5177 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 5181-5189 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 5638-5647 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T40 6084-6092 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T41 6424-6432 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 6571-6579 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T43 6582-6591 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T44 6781-6789 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T45 6968-6976 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 7198-7207 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T47 7339-7347 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T48 7794-7803 Disease denotes Pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T49 7838-7847 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T50 7932-7940 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 8130-8138 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T52 8255-8263 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T53 8419-8427 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T54 8549-8557 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T55 8621-8630 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T56 8802-8811 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T57 8830-8838 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T58 8841-8850 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T59 9022-9030 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T60 9033-9042 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T61 9156-9164 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T62 9255-9264 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 9814-9823 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T64 10458-10467 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 390-394 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T2 854-861 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T3 862-865 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 1009-1010 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 1232-1239 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T6 1418-1430 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T7 1454-1457 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T8 1550-1554 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T9 1888-1889 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 2390-2391 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 2483-2484 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 2744-2746 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T13 2840-2841 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T14 2868-2869 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 2899-2903 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T16 3073-3077 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T17 3118-3119 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T18 3180-3185 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T19 3187-3188 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T20 3420-3425 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T21 3487-3493 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T22 3563-3564 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 3590-3594 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T24 3628-3629 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T25 3630-3632 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T26 3886-3887 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 3976-3977 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 4119-4123 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T29 4408-4413 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T30 4448-4453 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T31 4626-4627 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 4707-4712 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T33 4807-4808 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T34 4874-4878 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T35 4880-4881 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T36 4920-4928 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test was
T37 4967-4968 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 5080-5085 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T39 5113-5118 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T40 5296-5300 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T41 5307-5308 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 5480-5481 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 5752-5759 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T44 5788-5792 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T45 5997-6000 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T46 6037-6041 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T47 6389-6394 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T48 6644-6651 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T49 6683-6688 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T50 6805-6810 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T51 6913-6915 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T52 6925-6930 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T53 7079-7080 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 7111-7112 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T55 7211-7216 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T56 7354-7355 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 7548-7549 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 7736-7737 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 8631-8632 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T60 8765-8766 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 8790-8791 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 8883-8890 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T63 9392-9397 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T64 9443-9444 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T65 9621-9625 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T66 9621-9625 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T67 9633-9634 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T68 9690-9699 http://purl.obolibrary.org/obo/UBERON_0002168 denotes left lung
T69 9881-9885 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T70 9881-9885 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T71 9929-9934 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T72 10109-10114 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T73 10147-10148 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T74 10279-10280 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T75 10350-10360 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung
T76 10525-10529 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T77 10525-10529 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T78 10573-10578 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 377-389 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T2 385-389 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T3 431-435 Chemical denotes gold http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050
T5 1537-1549 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T6 1545-1549 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T7 1612-1616 Chemical denotes gold http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050
T9 2729-2736 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T10 2886-2898 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T11 2894-2898 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T12 3060-3072 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T13 3068-3072 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T14 3204-3206 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T15 4381-4388 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T16 4569-4571 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T17 5132-5136 Chemical denotes gold http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050
T19 7738-7740 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T20 8186-8188 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T21 8490-8497 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T22 8698-8705 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T23 8777-8786 Chemical denotes indicator http://purl.obolibrary.org/obo/CHEBI_47867
T24 9654-9656 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T25 10082-10084 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596
T26 10300-10302 Chemical denotes DL http://purl.obolibrary.org/obo/CHEBI_68596

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 933-942 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 2191-2196 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 2233-2238 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T4 2472-2477 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T5 2709-2742 Phenotype denotes elevated C-reactive protein level http://purl.obolibrary.org/obo/HP_0011227
T6 2791-2796 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T7 3251-3260 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 3352-3361 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T9 3661-3666 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T10 3731-3736 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T11 3965-3970 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T12 4063-4083 Phenotype denotes difficulty breathing http://purl.obolibrary.org/obo/HP_0002098
T13 4088-4093 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T14 4113-4123 Phenotype denotes runny nose http://purl.obolibrary.org/obo/HP_0031417
T15 4162-4178 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T16 4184-4192 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T17 4361-4394 Phenotype denotes elevated C-reactive protein level http://purl.obolibrary.org/obo/HP_0011227
T18 4424-4433 Phenotype denotes emphysema http://purl.obolibrary.org/obo/HP_0002097
T19 4541-4550 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T20 4641-4650 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T21 7198-7207 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T22 7794-7803 Phenotype denotes Pneumonia http://purl.obolibrary.org/obo/HP_0002090
T23 7838-7847 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T24 9814-9823 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T25 10458-10467 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 44-57 http://purl.obolibrary.org/obo/GO_0003968 denotes Transcriptase
T2 44-57 http://purl.obolibrary.org/obo/GO_0003899 denotes Transcriptase
T3 150-158 http://purl.obolibrary.org/obo/GO_0007612 denotes Learning
T4 568-581 http://purl.obolibrary.org/obo/GO_0003968 denotes transcriptase
T5 568-581 http://purl.obolibrary.org/obo/GO_0003899 denotes transcriptase
T6 1728-1741 http://purl.obolibrary.org/obo/GO_0003968 denotes transcriptase
T7 1728-1741 http://purl.obolibrary.org/obo/GO_0003899 denotes transcriptase
T8 3194-3202 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T9 4074-4083 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing
T10 8063-8075 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T11 9496-9505 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing
T12 9663-9675 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T13 10092-10100 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T14 10309-10321 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-136 Sentence denotes False-Negative Results of Real-Time Reverse-Transcriptase Polymerase Chain Reaction for Severe Acute Respiratory Syndrome Coronavirus 2:
T2 137-205 Sentence denotes Role of Deep-Learning-Based CT Diagnosis and Insights from Two Cases
T3 207-215 Sentence denotes Abstract
T4 216-372 Sentence denotes The epidemic of 2019 novel coronavirus, later named as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is still gradually spreading worldwide.
T5 373-618 Sentence denotes The nucleic acid test or genetic sequencing serves as the gold standard method for confirmation of infection, yet several recent studies have reported false-negative results of real-time reverse-transcriptase polymerase chain reaction (rRT-PCR).
T6 619-815 Sentence denotes Here, we report two representative false-negative cases and discuss the supplementary role of clinical data with rRT-PCR, including laboratory examination results and computed tomography features.
T7 816-889 Sentence denotes Coinfection with SARS-COV-2 and other viruses has been discussed as well.
T8 891-903 Sentence denotes INTRODUCTION
T9 904-994 Sentence denotes At the end of December 2019, pneumonia of unknown causes broke out in Wuhan, Hubei, China.
T10 995-1305 Sentence denotes Subsequently, a novel coronavirus was found to be the causative pathogen, which was later named as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by the Coronavirus Study Group of the International Committee on Taxonomy of Viruses based on its phylogeny, taxonomy, and established practices (12).
T11 1306-1431 Sentence denotes Diseases caused by this novel coronavirus were named as coronavirus disease 2019 (COVID-19) by the World Health Organization.
T12 1432-1532 Sentence denotes To date, the epidemic has gradually spread to over 30 provinces of China and 26 countries worldwide.
T13 1533-1663 Sentence denotes The nucleic acid test or genetic sequencing for SARS-CoV-2 was regarded as the gold standard method for confirmation of infection.
T14 1664-1935 Sentence denotes Here, we report two false negative results of real-time reverse-transcriptase polymerase chain reaction (rRT-PCR) and discuss complementary approaches, such as computed tomography (CT) in combination with rRT-PCR to achieve a more reliable diagnosis in clinical practice.
T15 1936-2137 Sentence denotes This study was approved by the Institutional Review Board of the Beijing Haidian Hospital, and the requirement of informed consent was waived since patient information was anonymized to ensure privacy.
T16 2139-2150 Sentence denotes CASE REPORT
T17 2152-2158 Sentence denotes Case 1
T18 2159-2278 Sentence denotes 10-month-old boy presented with fever for 3 hours and was admitted to the Fever Clinic of the Beijing Haidian Hospital.
T19 2279-2345 Sentence denotes His parents and sister were confirmed with COVID-19 2 days before.
T20 2346-2443 Sentence denotes They contracted it after having dinner with a family friend who had recently returned from Wuhan.
T21 2444-2548 Sentence denotes Physical examination showed fever with a peak body temperature of 38℃ that returned to normal by itself.
T22 2549-2753 Sentence denotes Laboratory examination showed normal leukocyte (9.32 × 109/L) and neutrophil (1.93 × 109/L) counts, increased differential count of lymphocytes (68.8%), and an elevated C-reactive protein level (11 mg/L).
T23 2754-2911 Sentence denotes The patient had been admitted to the Fever Clinic 2 weeks before because of influenza A infection as evidenced by a weakly positive nucleic acid test result.
T24 2912-3023 Sentence denotes Subsequently, the patient underwent isolated medical observation before his family was diagnosed with COVID-19.
T25 3024-3186 Sentence denotes During the medical observation, the nucleic acid test presented weakly positive for influenza A again, and CT showed diffuse ground-glass opacities in both lungs.
T26 3187-3435 Sentence denotes A deep learning (DL)-based computer-aided diagnostic system for pneumonia, which was trained with CT scans of patients with COVID-19, suggested this patient to have pneumonia, with the lesion volume accounting for 13.3% of the whole lungs (Fig. 1).
T27 3436-3522 Sentence denotes Later, throat swab specimens from the patient were tested with rRT-PCR for SARS-CoV-2.
T28 3523-3619 Sentence denotes After two consecutive negative results, a third SARS-CoV-2 rRT-PCR test confirmed the infection.
T29 3621-3627 Sentence denotes Case 2
T30 3628-3701 Sentence denotes A 36-year-old man presented with fever for 5 days (peak body temperature:
T31 3702-3776 Sentence denotes 40℃) and was admitted to the Fever Clinic of the Beijing Haidian Hospital.
T32 3777-3936 Sentence denotes The patient had no direct contact history with patients with COVID-19 or people from the Hubei province, but a recent travel history to Chongqing was reported.
T33 3937-4004 Sentence denotes Physical examination showed fever with a body temperature of 38.5℃.
T34 4005-4137 Sentence denotes Respiratory symptoms at admission included dry throat and difficulty breathing; no cough, sputum, or stuffy/runny nose was observed.
T35 4138-4193 Sentence denotes Other symptoms included nausea, vomiting, and diarrhea.
T36 4194-4407 Sentence denotes Laboratory examination revealed increased leukocyte (13.69 × 109/L) and neutrophil (10.42 × 109/L) counts, decreased differential count of lymphocytes (12.6%), and an elevated C-reactive protein level (155 mg/mL).
T37 4408-4551 Sentence denotes Chest CT showed emphysema in both upper lungs and diffuse ground-glass opacities in the right lower lobe, highly suggestive of viral pneumonia.
T38 4552-4722 Sentence denotes In addition, the DL-based computer-aided diagnostic system also indicated a high risk of pneumonia with the infected area accounting for 8.9% of the whole lungs (Fig. 2).
T39 4723-4806 Sentence denotes Subsequently, throat swab specimens were promptly collected for SARS-CoV-2 rRT-PCR.
T40 4807-4879 Sentence denotes A negative result for SARS-CoV-2 was observed in the first rRT-PCR test.
T41 4880-4998 Sentence denotes A second consecutive SARS-CoV-2 rRT-PCR test was conducted immediately thereafter, and a positive result was obtained.
T42 4999-5086 Sentence denotes The patient was further confirmed with COVID-19 with additional positive rRT-PCR tests.
T43 5088-5098 Sentence denotes DISCUSSION
T44 5099-5410 Sentence denotes Since rRT-PCR tests serve as the gold standard method to confirm the infection of SARS-CoV-2, false-negative results could hinder the prevention and control of the epidemic, particularly when this test plays a key reference role in deciding the necessity for continued isolated medical observation or discharge.
T45 5411-5597 Sentence denotes Regarding the underlying reasons for false-negative rRT-PCR results, a previous published study suggested that insufficient viral specimens and laboratory error might be responsible (3).
T46 5598-5851 Sentence denotes We speculated from these two cases that infection routes, disease progression status (specimen collection timing and methods), and coinfection with other viruses might influence the rRT-PCR test accuracy, which should be further studied with more cases.
T47 5852-5911 Sentence denotes False-negative rRT-PCR results were seen in many hospitals.
T48 5912-6155 Sentence denotes By monitoring data collected at our hospital from January 21 to 31, 2020, two out of ten negative cases shown by the rRT-PCR test were finally confirmed to be positive for COVID-19, yielding an approximately 20% false-negative rate of rRT-PCR.
T49 6156-6327 Sentence denotes Although the false-negative estimate would not be accurate until we expand the observational time span and number of monitored cases, the drawback of rRT-PCR was revealed.
T50 6328-6497 Sentence denotes Clinical manifestations, laboratory examination results, and chest CT features of patients with COVID-19 were also of great value in helping the detection and diagnosis.
T51 6498-6592 Sentence denotes Thus, an integrated criterion should be established for the diagnosis of SARS-CoV-2 infection.
T52 6593-6736 Sentence denotes In addition to the epidemiological information, we focused on two aspects of information: chest CT features and laboratory examination results.
T53 6737-6977 Sentence denotes Of note, approximately 96% of patients with COVID-19 presented with chest CT abnormalities, such as multiple bilateral and peripheral ground-glass opacities and consolidation (34), making chest CT features essential in recognizing COVID-19.
T54 6978-7110 Sentence denotes The National Health Commission of China revised the diagnostic criteria in the Hubei province, where a severe epidemic occurred (5).
T55 7111-7251 Sentence denotes A new diagnostic type called “Clinical diagnosis” was set according to the presence of pneumonia on chest CT, regardless of rRT-PCR results.
T56 7252-7348 Sentence denotes To some extent, CT features and rRT-PCR results were complimentary in the diagnosis of COVID-19.
T57 7349-7692 Sentence denotes From a clinical perspective, CT features could be utilized as the first and immediate reference for doctors to screen the highly suspected cases and to take necessary actions while rRT-PCR serves as a confirmation tool, the results of which could be utilized later to decide the subsequent action of continuing isolated treatment or discharge.
T58 7693-8041 Sentence denotes Notably, our hospital was facilitated with a DL-based computer-aided diagnostic system (InferRead CT Pneumonia, Infervision, Beijing, China) for pneumonia, which greatly improved the detection efficiency for patients highly suspected with COVID-19 by alarming the technician within 2 minutes when any suspected cases was found after CT examination.
T59 8042-8154 Sentence denotes The automatic lesion segmentation on CT was also helpful to evaluate the progression of COVID-19 quantitatively.
T60 8155-8288 Sentence denotes With an integrated approach of DL, CT features, and rRT-PCR results, the screening and treatment of COVID-19 would be more effective.
T61 8289-8379 Sentence denotes Furthermore, we observed conflicting laboratory examination results in these two patients.
T62 8380-8565 Sentence denotes Patient in Case 2 was infected only by SARS-CoV-2 and presented decreased lymphocytes and elevated C-reactive protein, consistent with the typical tendency found in the COVID-19 cohort.
T63 8566-8706 Sentence denotes In contrast, the patient in Case 1 was coinfected with influenza A and presented with increased lymphocytes and elevated C-reactive protein.
T64 8707-8952 Sentence denotes The difference in laboratory examination results could be a potential indicator of a different infection status, including SARS-CoV-2 infection alone or coinfection with other viruses, which, however, should be further validated with more cases.
T65 8953-9165 Sentence denotes In conclusion, we reported two false-negative results of rRT-PCR for SARS-CoV-2 infection and mentioned the possible tandem approaches for clinical practices to ensure an early and accurate diagnosis of COVID-19.
T66 9166-9293 Sentence denotes In addition, the potential role of laboratory examination results in differentiating the infection status was revealed as well.
T67 9295-9317 Sentence denotes Conflicts of Interest:
T68 9318-9382 Sentence denotes The authors have no potential conflicts of interest to disclose.
T69 9384-9442 Sentence denotes Fig. 1 Chest CT scans for 10-month-old patient in Case 1.
T70 9443-9445 Sentence denotes A.
T71 9446-9554 Sentence denotes Thin-slice CT scan that shows glimpse of lesions (breathing-induced motion artifacts are heavy for patient).
T72 9555-9632 Sentence denotes CT shows diffuse ill-defined ground-glass opacities in both upper lung lobes.
T73 9633-9635 Sentence denotes B.
T74 9636-9772 Sentence denotes Representative of DL-based segmentation of lesions in left lung that shows overview of automatically calculated abnormality proportions.
T75 9773-9886 Sentence denotes Artificial intelligence alarms suspected pneumonia based on relatively large proportion of abnormalities in lung.
T76 9887-10055 Sentence denotes Detailed abnormality proportions in whole lungs, right upper lobe, right middle lobe, right lower lobe, left upper lobe, and left lower lobe were calculated and listed.
T77 10056-10100 Sentence denotes CT = computed tomography, DL = deep learning
T78 10101-10146 Sentence denotes Fig. 2 Chest CT scans for patient in Case 2.
T79 10147-10149 Sentence denotes A.
T80 10150-10199 Sentence denotes Thin-slice CT scan that shows glimpse of lesions.
T81 10200-10278 Sentence denotes CT shows diffuse ground-glass opacities in dependent area of right lower lobe.
T82 10279-10281 Sentence denotes B.
T83 10282-10416 Sentence denotes Representative of DL-based segmentation of lesions in lower lobe of right lung that shows overview of automatically calculated ratios.
T84 10417-10530 Sentence denotes Artificial intelligence alarms suspected pneumonia based on relatively large proportion of abnormalities in lung.
T85 10531-10699 Sentence denotes Detailed abnormality proportions in whole lungs, right upper lobe, right middle lobe, right lower lobe, left upper lobe, and left lower lobe were calculated and listed.

2_test

Id Subject Object Predicate Lexical cue
32174053-31978945-66079542 1301-1303 31978945 denotes 12