PMC:7081066 / 125-1339
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
36 | 857-861 | Gene | denotes | ACE2 | Gene:59272 |
37 | 1051-1056 | Gene | denotes | spike | Gene:43740568 |
38 | 1078-1082 | Gene | denotes | ACE2 | Gene:59272 |
39 | 1134-1138 | Gene | denotes | ACE2 | Gene:59272 |
40 | 785-790 | Gene | denotes | spike | Gene:43740568 |
41 | 1124-1129 | Gene | denotes | spike | Gene:43740568 |
42 | 851-856 | Gene | denotes | spike | Gene:43740568 |
43 | 586-591 | Gene | denotes | spike | Gene:43740568 |
44 | 5-10 | Species | denotes | human | Tax:9606 |
45 | 144-150 | Species | denotes | people | Tax:9606 |
46 | 237-243 | Species | denotes | humans | Tax:9606 |
47 | 496-506 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
48 | 607-617 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
49 | 641-646 | Species | denotes | human | Tax:9606 |
50 | 650-655 | Species | denotes | human | Tax:9606 |
51 | 840-850 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
52 | 952-955 | Species | denotes | CoV | Tax:11118 |
53 | 1040-1050 | Species | denotes | SARS-Cov-2 | Tax:2697049 |
54 | 1072-1077 | Species | denotes | human | Tax:9606 |
55 | 1120-1123 | Species | denotes | CoV | Tax:11118 |
56 | 1193-1203 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
57 | 1207-1213 | Species | denotes | humans | Tax:9606 |
58 | 11-25 | Disease | denotes | viral diseases | MESH:D001102 |
59 | 49-57 | Disease | denotes | zoonotic | MESH:D015047 |
60 | 102-110 | Disease | denotes | zoonotic | MESH:D015047 |
61 | 224-233 | Disease | denotes | mortality | MESH:D003643 |
62 | 389-397 | Disease | denotes | zoonotic | MESH:D015047 |
63 | 467-475 | Disease | denotes | Covid-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T2 | 266-274 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T3 | 592-599 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T4 | 1057-1064 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid_AGAC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
p24367s19 | 888-897 | NegReg | denotes | reduction |
p24367s22 | 905-919 | MPA | denotes | binding energy |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T2 | 11-25 | Disease | denotes | viral diseases | http://purl.obolibrary.org/obo/MONDO_0005108 |
T3 | 496-504 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T4 | 607-615 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T5 | 840-848 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T6 | 1040-1044 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T7 | 1193-1201 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 5-10 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T3 | 30-31 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T4 | 47-48 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T5 | 237-243 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T6 | 512-515 | http://purl.obolibrary.org/obo/PR_000001343 | denotes | aim |
T7 | 641-649 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human to |
T8 | 650-655 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T9 | 740-742 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
T10 | 886-887 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T11 | 1015-1016 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T12 | 1072-1077 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T13 | 1207-1213 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T2 | 266-274 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T3 | 292-299 | Chemical | denotes | ligands | http://purl.obolibrary.org/obo/CHEBI_52214 |
T4 | 592-599 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T5 | 1057-1064 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 0-64 | Sentence | denotes | Many human viral diseases are a consequence of a zoonotic event. |
T5 | 65-244 | Sentence | denotes | Some of the diseases caused by these zoonotic events have affected millions of people around the world, some of which have resulted in high rates of morbidity/mortality in humans. |
T6 | 245-363 | Sentence | denotes | Changes in the viral proteins that function as ligands of the host receptor may promote the spillover between species. |
T7 | 364-507 | Sentence | denotes | The most recent of these zoonotic events that have caused an ongoing epidemic of high magnitude is the Covid-19 epidemics caused by SARS-CoV-2. |
T8 | 508-669 | Sentence | denotes | The aim of this study was to determine the mutation(s) in the sequence of the spike protein of the SARS-CoV-2 that might be favoring human to human transmission. |
T9 | 670-791 | Sentence | denotes | An in silico approach was performed, and changes were detected in the S1 subunit of the receptor-binding domain of spike. |
T10 | 792-973 | Sentence | denotes | The observed changes have significant effect on SARS-CoV-2 spike/ACE2 interaction and produce a reduction in the binding energy, compared to the one of the Bat-CoV to this receptor. |
T11 | 974-1139 | Sentence | denotes | The data presented in this study suggest a higher affinity of the SARS-Cov-2 spike protein to the human ACE2 receptor, compared to the one of Bat-CoV spike and ACE2. |
T12 | 1140-1214 | Sentence | denotes | This could be the cause of the rapid viral spread of SARS-CoV-2 in humans. |