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PMC:7080035 / 7212-8117 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T51 57-61 Body_part denotes back http://purl.org/sig/ont/fma/fma25056
T52 160-165 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T53 220-224 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T54 272-276 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T55 441-451 Body_part denotes right lung http://purl.org/sig/ont/fma/fma7309
T56 496-507 Body_part denotes lymph nodes http://purl.org/sig/ont/fma/fma5034
T57 496-501 Body_part denotes lymph http://purl.org/sig/ont/fma/fma9671
T58 536-547 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826
T59 812-822 Body_part denotes right lung http://purl.org/sig/ont/fma/fma7309
T60 862-873 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T39 160-165 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T40 220-224 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T41 225-229 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T42 272-276 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T43 277-281 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T44 441-451 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T45 447-451 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T46 496-501 Body_part denotes lymph http://purl.obolibrary.org/obo/UBERON_0002391
T47 536-547 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728
T48 812-822 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T49 818-822 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T50 862-873 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 129-139 Disease denotes leucopenia http://purl.obolibrary.org/obo/MONDO_0003785
T32 640-648 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T79 7-8 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 86-87 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 105-112 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T82 122-123 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 160-165 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T84 220-224 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T85 220-224 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T86 234-237 http://purl.obolibrary.org/obo/CLO_0001618 denotes a 9
T87 234-237 http://purl.obolibrary.org/obo/CLO_0001619 denotes a 9
T88 234-237 http://purl.obolibrary.org/obo/CLO_0001620 denotes a 9
T89 272-276 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T90 272-276 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T91 306-307 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 333-334 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T93 441-451 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung
T94 462-463 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T95 496-507 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes
T96 664-671 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T97 676-678 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T98 812-822 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T32 360-363 Chemical denotes PET http://purl.obolibrary.org/obo/CHEBI_131701
T33 651-663 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T34 659-663 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T35 698-707 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T36 712-735 Chemical denotes anti-inflammatory drugs http://purl.obolibrary.org/obo/CHEBI_35472
T37 730-735 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T32 57-66 Phenotype denotes back pain http://purl.obolibrary.org/obo/HP_0003418
T33 71-80 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T63 0-6 Sentence denotes Case 3
T64 7-93 Sentence denotes A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week.
T65 94-159 Sentence denotes Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L).
T66 160-332 Sentence denotes Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy.
T67 333-473 Sentence denotes A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows).
T68 474-620 Sentence denotes Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows).
T69 621-672 Sentence denotes We did not perform SARS-CoV-2 nucleic acid testing.
T70 673-763 Sentence denotes An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.
T71 764-905 Sentence denotes Fig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
181 21-26 Species denotes woman Tax:9606
182 640-650 Species denotes SARS-CoV-2 Tax:2697049
183 352-359 Chemical denotes 18F-FDG MESH:D019788
184 57-66 Disease denotes back pain MESH:D001416
185 71-80 Disease denotes dry cough MESH:D003371
186 129-139 Disease denotes leucopenia MESH:C536227
187 321-331 Disease denotes malignancy MESH:D009369