PMC:7080035 / 4109-4597
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 299-301 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T16 | 173-176 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T17 | 237-253 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T18 | 249-253 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T19 | 290-297 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T20 | 303-313 | Body_part | denotes | lymph node | http://purl.org/sig/ont/fma/fma5034 |
| T21 | 320-336 | Body_part | denotes | right upper lobe | http://purl.org/sig/ont/fma/fma7333 |
| T22 | 343-360 | Body_part | denotes | right middle lobe | http://purl.org/sig/ont/fma/fma7383 |
| T23 | 367-383 | Body_part | denotes | right lower lobe | http://purl.org/sig/ont/fma/fma7337 |
| T24 | 390-405 | Body_part | denotes | left upper lobe | http://purl.org/sig/ont/fma/fma7370 |
| T25 | 412-427 | Body_part | denotes | left lower lobe | http://purl.org/sig/ont/fma/fma7371 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T13 | 243-248 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T14 | 303-313 | Body_part | denotes | lymph node | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T15 | 303-308 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T16 | 332-336 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T17 | 356-360 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T18 | 379-383 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T19 | 401-405 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T20 | 423-427 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T18 | 56-77 | Disease | denotes | Mycoplasma pneumoniae | http://purl.obolibrary.org/obo/MONDO_0005867 |
| T19 | 79-99 | Disease | denotes | Chlamydia pneumoniae | http://purl.obolibrary.org/obo/MONDO_0025598 |
| T20 | 212-222 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T21 | 299-301 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T32 | 135-140 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T33 | 156-157 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T34 | 158-163 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T35 | 243-248 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T36 | 249-253 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T37 | 303-313 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph node |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T20 | 290-297 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T21 | 299-301 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
| T23 | 407-410 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T20 | 67-77 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
| T21 | 89-99 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 476-482 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T5 | 476-482 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T40 | 0-55 | Sentence | denotes | *The following respiratory pathogens were investigated: |
| T41 | 56-176 | Sentence | denotes | Mycoplasma pneumoniae, Chlamydia pneumoniae, adenovirus, respiratory syncytial virus, and Coxsackie B-virus specific IgM |
| T42 | 177-231 | Sentence | denotes | **Including malignancies and other infectious diseases |
| T43 | 232-488 | Sentence | denotes | WBC, white blood cell; hsCRP, high-sensitivity C-reactive protein; LN, lymph node; RUL, right upper lobe; RML, right middle lobe; RLL, right lower lobe; LUL, left upper lobe; LLL, left lower lobe; GGO, ground-glass opacities; SUV, standardized uptake value |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 93 | 56-77 | Species | denotes | Mycoplasma pneumoniae | Tax:2104 |
| 94 | 79-99 | Species | denotes | Chlamydia pneumoniae | Tax:83558 |
| 95 | 101-111 | Species | denotes | adenovirus | Tax:10508 |
| 96 | 113-140 | Species | denotes | respiratory syncytial virus | Tax:12814 |
| 97 | 15-26 | Species | denotes | respiratory | Tax:12814 |
| 100 | 189-201 | Disease | denotes | malignancies | MESH:D009369 |
| 101 | 212-231 | Disease | denotes | infectious diseases | MESH:D003141 |
| 103 | 279-297 | Gene | denotes | C-reactive protein | Gene:1401 |