
PMC:7080035 / 10073-11260
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T73 | 173-188 | Body_part | denotes | pulmonary lobes | http://purl.org/sig/ont/fma/fma7311 |
T74 | 289-304 | Body_part | denotes | lung parenchyma | http://purl.org/sig/ont/fma/fma27360 |
T75 | 353-357 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T62 | 289-304 | Body_part | denotes | lung parenchyma | http://purl.obolibrary.org/obo/UBERON_0008946 |
T63 | 289-293 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T64 | 294-304 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
T65 | 353-357 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T37 | 353-366 | Disease | denotes | lung diseases | http://purl.obolibrary.org/obo/MONDO_0005275 |
T38 | 372-378 | Disease | denotes | tumors | http://purl.obolibrary.org/obo/MONDO_0005070 |
T39 | 473-481 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T40 | 492-502 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
T41 | 633-642 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T42 | 667-675 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T43 | 676-686 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
T44 | 720-735 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
T45 | 933-941 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T46 | 952-965 | Disease | denotes | lymphadenitis | http://purl.obolibrary.org/obo/MONDO_0002052 |
T47 | 1156-1164 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T122 | 227-228 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T123 | 258-259 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T124 | 289-293 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T125 | 289-293 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T126 | 353-357 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T127 | 353-357 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T128 | 512-513 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T129 | 643-648 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T130 | 1011-1016 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T131 | 1017-1025 | http://purl.obolibrary.org/obo/NCBITaxon_9443 | denotes | primates |
T132 | 1165-1168 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T43 | 234-240 | Chemical | denotes | tracer | http://purl.obolibrary.org/obo/CHEBI_35204 |
T44 | 440-446 | Chemical | denotes | tracer | http://purl.obolibrary.org/obo/CHEBI_35204 |
T45 | 753-756 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T39 | 353-366 | Phenotype | denotes | lung diseases | http://purl.obolibrary.org/obo/HP_0002088 |
T40 | 482-502 | Phenotype | denotes | pulmonary infections | http://purl.obolibrary.org/obo/HP_0006532 |
T41 | 720-735 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
T42 | 952-965 | Phenotype | denotes | lymphadenitis | http://purl.obolibrary.org/obo/HP_0002840 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10 | 241-247 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
T11 | 241-247 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
T12 | 447-453 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
T13 | 447-453 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
T14 | 801-807 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
T15 | 801-807 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
T16 | 1179-1186 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 0-189 | Sentence | denotes | In accordance with previously published observations [5, 6], our cases were characterized by the presence of peripheral GGOs and/or consolidative opacities in more than two pulmonary lobes. |
T88 | 190-248 | Sentence | denotes | Notably, all of these lesions showed a high tracer uptake. |
T89 | 249-430 | Sentence | denotes | Although a bilateral involvement of the lung parenchyma can be observed in several benign and malignant lung diseases [7], tumors presenting as GGOs are unlikely to be FDG-avid [8]. |
T90 | 431-657 | Sentence | denotes | The high tracer uptake that characterized COVID-19 pulmonary infections reflects a significant inflammatory burden, similar to that elicited by the Middle East respiratory syndrome or the H1N1 pandemic influenza virus [9, 10]. |
T91 | 658-831 | Sentence | denotes | Although COVID-19 infections do not seem to be accompanied by lymphadenopathy [6], our 18F-FDG PET/CT findings revealed an increased nodal FDG uptake in three of four cases. |
T92 | 832-1050 | Sentence | denotes | Although no obvious nodal enlargement was evident, our imaging data indicate for the first time that COVID-19 may cause lymphadenitis—in line with previous data obtained from non-human primates exposed to MERS-CoV [9]. |
T93 | 1051-1187 | Sentence | denotes | Another interesting finding is that no disseminated lesions were evident in our patients—suggesting that COVID-19 has pulmonary tropism. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32088847-31524673-29170378 | 368-369 | 31524673 | denotes | 7 |
32088847-29473946-29170379 | 427-428 | 29473946 | denotes | 8 |
32088847-26573211-29170380 | 650-651 | 26573211 | denotes | 9 |
32088847-22911695-29170381 | 653-655 | 22911695 | denotes | 10 |
32088847-26573211-29170382 | 1047-1048 | 26573211 | denotes | 9 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
240 | 852-857 | Gene | denotes | nodal | Gene:4838 |
241 | 791-796 | Gene | denotes | nodal | Gene:4838 |
242 | 619-623 | Species | denotes | H1N1 | Tax:114727 |
243 | 633-648 | Species | denotes | influenza virus | Tax:11308 |
244 | 1011-1016 | Species | denotes | human | Tax:9606 |
245 | 1037-1045 | Species | denotes | MERS-CoV | Tax:1335626 |
246 | 1131-1139 | Species | denotes | patients | Tax:9606 |
247 | 745-752 | Chemical | denotes | 18F-FDG | MESH:D019788 |
248 | 797-800 | Chemical | denotes | FDG | MESH:D019788 |
249 | 343-366 | Disease | denotes | malignant lung diseases | MESH:D008171 |
250 | 372-378 | Disease | denotes | tumors | MESH:D009369 |
251 | 473-481 | Disease | denotes | COVID-19 | MESH:C000657245 |
252 | 482-502 | Disease | denotes | pulmonary infections | MESH:D012141 |
253 | 579-611 | Disease | denotes | Middle East respiratory syndrome | MESH:D018352 |
254 | 667-675 | Disease | denotes | COVID-19 | MESH:C000657245 |
255 | 676-686 | Disease | denotes | infections | MESH:D007239 |
256 | 720-735 | Disease | denotes | lymphadenopathy | MESH:D008206 |
257 | 933-941 | Disease | denotes | COVID-19 | MESH:C000657245 |
258 | 952-965 | Disease | denotes | lymphadenitis | MESH:D008199 |
259 | 1156-1164 | Disease | denotes | COVID-19 | MESH:C000657245 |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32088847-31524673-29170378 | 368-369 | 31524673 | denotes | 7 |
32088847-29473946-29170379 | 427-428 | 29473946 | denotes | 8 |
32088847-26573211-29170380 | 650-651 | 26573211 | denotes | 9 |
32088847-22911695-29170381 | 653-655 | 22911695 | denotes | 10 |
32088847-26573211-29170382 | 1047-1048 | 26573211 | denotes | 9 |