PMC:7080035
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 3878-3880 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
| T2 | 4036-4038 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
| T3 | 4408-4410 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 758-762 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T2 | 795-810 | Body_part | denotes | pulmonary lobes | http://purl.org/sig/ont/fma/fma7311 |
| T3 | 812-816 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
| T4 | 895-905 | Body_part | denotes | lymph node | http://purl.org/sig/ont/fma/fma5034 |
| T5 | 1783-1786 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T6 | 2202-2207 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T7 | 2247-2252 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T8 | 2738-2742 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T9 | 3236-3242 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T10 | 3269-3273 | Body_part | denotes | Back | http://purl.org/sig/ont/fma/fma25056 |
| T11 | 3452-3463 | Body_part | denotes | Lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
| T12 | 3757-3761 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
| T13 | 3925-3936 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T14 | 3967-3978 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T15 | 4004-4015 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T16 | 4282-4285 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T17 | 4346-4362 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T18 | 4358-4362 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T19 | 4399-4406 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T20 | 4412-4422 | Body_part | denotes | lymph node | http://purl.org/sig/ont/fma/fma5034 |
| T21 | 4429-4445 | Body_part | denotes | right upper lobe | http://purl.org/sig/ont/fma/fma7333 |
| T22 | 4452-4469 | Body_part | denotes | right middle lobe | http://purl.org/sig/ont/fma/fma7383 |
| T23 | 4476-4492 | Body_part | denotes | right lower lobe | http://purl.org/sig/ont/fma/fma7337 |
| T24 | 4499-4514 | Body_part | denotes | left upper lobe | http://purl.org/sig/ont/fma/fma7370 |
| T25 | 4521-4536 | Body_part | denotes | left lower lobe | http://purl.org/sig/ont/fma/fma7371 |
| T26 | 4660-4666 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T27 | 4737-4753 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T28 | 4749-4753 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T29 | 4847-4854 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T30 | 5071-5074 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T31 | 5104-5109 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T32 | 5200-5210 | Body_part | denotes | right lung | http://purl.org/sig/ont/fma/fma7309 |
| T33 | 5439-5443 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T34 | 5480-5484 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T35 | 5753-5757 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T36 | 5773-5777 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T37 | 5841-5845 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T38 | 5857-5860 | Body_part | denotes | rib | http://purl.org/sig/ont/fma/fma7574 |
| T39 | 6096-6102 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T40 | 6240-6251 | Body_part | denotes | neutrophils | http://purl.org/sig/ont/fma/fma62860 |
| T41 | 6262-6273 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
| T42 | 6351-6362 | Body_part | denotes | erythrocyte | http://purl.org/sig/ont/fma/fma62845 |
| T43 | 6622-6627 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T44 | 6706-6717 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T45 | 6706-6711 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T46 | 6725-6736 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T47 | 7119-7124 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T48 | 7154-7165 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T49 | 7154-7159 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T50 | 7173-7184 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T51 | 7269-7273 | Body_part | denotes | back | http://purl.org/sig/ont/fma/fma25056 |
| T52 | 7372-7377 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T53 | 7432-7436 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T54 | 7484-7488 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T55 | 7653-7663 | Body_part | denotes | right lung | http://purl.org/sig/ont/fma/fma7309 |
| T56 | 7708-7719 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T57 | 7708-7713 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T58 | 7748-7759 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T59 | 8024-8034 | Body_part | denotes | right lung | http://purl.org/sig/ont/fma/fma7309 |
| T60 | 8074-8085 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T61 | 8448-8453 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T62 | 8557-8561 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T63 | 8714-8719 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T64 | 8792-8797 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T65 | 8996-9007 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T66 | 8996-9001 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T67 | 9015-9026 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T68 | 9264-9269 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T69 | 9484-9489 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T70 | 9516-9527 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T71 | 9516-9521 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T72 | 9535-9546 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
| T73 | 10246-10261 | Body_part | denotes | pulmonary lobes | http://purl.org/sig/ont/fma/fma7311 |
| T74 | 10362-10377 | Body_part | denotes | lung parenchyma | http://purl.org/sig/ont/fma/fma27360 |
| T75 | 10426-10430 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T76 | 12176-12199 | Body_part | denotes | upper respiratory tract | http://purl.org/sig/ont/fma/fma45661 |
| T77 | 12561-12565 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T78 | 12842-12846 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 758-762 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T2 | 812-816 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T3 | 895-905 | Body_part | denotes | lymph node | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T4 | 895-900 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T5 | 2202-2207 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T6 | 2247-2252 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T7 | 2738-2742 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T8 | 3236-3242 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T9 | 3757-3761 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T10 | 3925-3936 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T11 | 3967-3978 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T12 | 4004-4015 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T13 | 4352-4357 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T14 | 4412-4422 | Body_part | denotes | lymph node | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T15 | 4412-4417 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T16 | 4441-4445 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T17 | 4465-4469 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T18 | 4488-4492 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T19 | 4510-4514 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T20 | 4532-4536 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T21 | 4660-4666 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T22 | 4743-4748 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T23 | 5104-5109 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T24 | 5200-5210 | Body_part | denotes | right lung | http://purl.obolibrary.org/obo/UBERON_0002167 |
| T25 | 5206-5210 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T26 | 5439-5443 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T27 | 5480-5484 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T28 | 5753-5757 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T29 | 5773-5777 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T30 | 5841-5845 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T31 | 5857-5860 | Body_part | denotes | rib | http://purl.obolibrary.org/obo/UBERON_0002228 |
| T32 | 6096-6102 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T33 | 6706-6717 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T34 | 6706-6711 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T35 | 6725-6736 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T36 | 7154-7165 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T37 | 7154-7159 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T38 | 7173-7184 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T39 | 7372-7377 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T40 | 7432-7436 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T41 | 7437-7441 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T42 | 7484-7488 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T43 | 7489-7493 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T44 | 7653-7663 | Body_part | denotes | right lung | http://purl.obolibrary.org/obo/UBERON_0002167 |
| T45 | 7659-7663 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T46 | 7708-7713 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T47 | 7748-7759 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T48 | 8024-8034 | Body_part | denotes | right lung | http://purl.obolibrary.org/obo/UBERON_0002167 |
| T49 | 8030-8034 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T50 | 8074-8085 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T51 | 8448-8453 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T52 | 8557-8561 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T53 | 8562-8566 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
| T54 | 8792-8797 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T55 | 8996-9007 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T56 | 8996-9001 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T57 | 9015-9026 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T58 | 9264-9269 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T59 | 9516-9527 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T60 | 9516-9521 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T61 | 9535-9546 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
| T62 | 10362-10377 | Body_part | denotes | lung parenchyma | http://purl.obolibrary.org/obo/UBERON_0008946 |
| T63 | 10362-10366 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T64 | 10367-10377 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
| T65 | 10426-10430 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T66 | 12176-12199 | Body_part | denotes | upper respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001557 |
| T67 | 12182-12199 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T68 | 12561-12565 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T69 | 12842-12846 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 27-35 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T2 | 191-210 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T3 | 221-229 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 452-460 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 681-689 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T6 | 990-998 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T7 | 1145-1155 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T8 | 1322-1341 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T9 | 1392-1400 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 1626-1634 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T11 | 1674-1682 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T12 | 2807-2815 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T13 | 3046-3054 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T14 | 3127-3135 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T15 | 3231-3242 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T16 | 3878-3880 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
| T17 | 4036-4038 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
| T18 | 4165-4186 | Disease | denotes | Mycoplasma pneumoniae | http://purl.obolibrary.org/obo/MONDO_0005867 |
| T19 | 4188-4208 | Disease | denotes | Chlamydia pneumoniae | http://purl.obolibrary.org/obo/MONDO_0025598 |
| T20 | 4321-4331 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T21 | 4408-4410 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
| T22 | 4655-4666 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T23 | 4954-4975 | Disease | denotes | Mycoplasma pneumoniae | http://purl.obolibrary.org/obo/MONDO_0005867 |
| T24 | 4977-4997 | Disease | denotes | Chlamydia pneumoniae | http://purl.obolibrary.org/obo/MONDO_0025598 |
| T25 | 5288-5293 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T26 | 5301-5319 | Disease | denotes | infectious disease | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T27 | 5519-5527 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T28 | 5861-5869 | Disease | denotes | fracture | http://purl.obolibrary.org/obo/MONDO_0005315 |
| T29 | 6160-6170 | Disease | denotes | leukopenia | http://purl.obolibrary.org/obo/MONDO_0003785 |
| T30 | 6819-6827 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T31 | 7341-7351 | Disease | denotes | leucopenia | http://purl.obolibrary.org/obo/MONDO_0003785 |
| T32 | 7852-7860 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T33 | 9169-9177 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T34 | 9590-9598 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T35 | 9954-9962 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T36 | 10063-10071 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T37 | 10426-10439 | Disease | denotes | lung diseases | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T38 | 10445-10451 | Disease | denotes | tumors | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T39 | 10546-10554 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T40 | 10565-10575 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T41 | 10706-10715 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T42 | 10740-10748 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T43 | 10749-10759 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T44 | 10793-10808 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T45 | 11006-11014 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T46 | 11025-11038 | Disease | denotes | lymphadenitis | http://purl.obolibrary.org/obo/MONDO_0002052 |
| T47 | 11229-11237 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T48 | 11371-11381 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T49 | 11496-11504 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T50 | 11709-11717 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T51 | 11720-11729 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T52 | 11795-11803 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T53 | 11988-11996 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T54 | 12306-12314 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T55 | 12361-12369 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T56 | 12591-12599 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T57 | 12600-12609 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T58 | 12815-12823 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T59 | 12907-12916 | Disease | denotes | Infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T60 | 12921-12933 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 37-38 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T2 | 99-102 | http://purl.obolibrary.org/obo/PR_000001343 | denotes | aim |
| T3 | 501-506 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T4 | 532-533 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T5 | 666-667 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T6 | 758-762 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T7 | 758-762 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T8 | 812-816 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
| T9 | 812-816 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
| T10 | 847-848 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T11 | 895-905 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph node |
| T12 | 964-965 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T13 | 999-1002 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T14 | 1352-1353 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T15 | 1584-1596 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | Organization |
| T16 | 1748-1752 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 4, 5 |
| T17 | 2057-2073 | http://www.ebi.ac.uk/efo/EFO_0000808 | denotes | anatomical sites |
| T18 | 2202-2207 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T19 | 2202-2207 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T20 | 2224-2229 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T21 | 2247-2252 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T22 | 2555-2562 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T23 | 2738-2742 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T24 | 2738-2742 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T25 | 2856-2861 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T26 | 2887-2888 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T27 | 3031-3032 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T28 | 3155-3158 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 3 4 |
| T29 | 3203-3205 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T30 | 3757-3761 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
| T31 | 3757-3761 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
| T32 | 4244-4249 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T33 | 4265-4266 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T34 | 4267-4272 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T35 | 4352-4357 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T36 | 4358-4362 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T37 | 4412-4422 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph node |
| T38 | 4606-4607 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T39 | 4718-4725 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T40 | 4735-4736 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T41 | 4743-4748 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T42 | 4749-4753 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T43 | 4797-4798 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T44 | 4901-4902 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T45 | 5033-5038 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T46 | 5054-5055 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T47 | 5056-5061 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T48 | 5102-5103 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T49 | 5104-5109 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T50 | 5187-5188 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T51 | 5200-5210 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lung |
| T52 | 5286-5287 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T53 | 5439-5443 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T54 | 5439-5443 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T55 | 5454-5455 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T56 | 5480-5484 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T57 | 5480-5484 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T58 | 5543-5554 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing was |
| T59 | 5753-5757 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T60 | 5753-5757 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T61 | 5773-5777 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T62 | 5773-5777 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T63 | 5786-5787 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T64 | 5809-5810 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T65 | 5841-5845 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T66 | 5841-5845 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T67 | 5857-5860 | http://purl.obolibrary.org/obo/UBERON_0002228 | denotes | rib |
| T68 | 5898-5899 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T69 | 6138-6145 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T70 | 6351-6362 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | erythrocyte |
| T71 | 6440-6441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T72 | 6622-6627 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T73 | 6656-6658 | http://purl.obolibrary.org/obo/CLO_0001236 | denotes | 2a |
| T74 | 6660-6661 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T75 | 6706-6717 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T76 | 6843-6854 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing was |
| T77 | 7119-7124 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T78 | 7154-7165 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T79 | 7219-7220 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T80 | 7298-7299 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T81 | 7317-7324 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T82 | 7334-7335 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T83 | 7372-7377 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T84 | 7432-7436 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T85 | 7432-7436 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T86 | 7446-7449 | http://purl.obolibrary.org/obo/CLO_0001618 | denotes | a 9 |
| T87 | 7446-7449 | http://purl.obolibrary.org/obo/CLO_0001619 | denotes | a 9 |
| T88 | 7446-7449 | http://purl.obolibrary.org/obo/CLO_0001620 | denotes | a 9 |
| T89 | 7484-7488 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T90 | 7484-7488 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T91 | 7518-7519 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T92 | 7545-7546 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T93 | 7653-7663 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lung |
| T94 | 7674-7675 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T95 | 7708-7719 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T96 | 7876-7883 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T97 | 7888-7890 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T98 | 8024-8034 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lung |
| T99 | 8126-8127 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T100 | 8128-8130 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T101 | 8380-8381 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T102 | 8448-8453 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T103 | 8522-8523 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T104 | 8557-8561 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T105 | 8557-8561 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T106 | 8568-8569 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T107 | 8714-8719 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T108 | 8752-8753 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T109 | 8792-8797 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T110 | 8864-8865 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T111 | 8996-9007 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T112 | 9078-9080 | http://purl.obolibrary.org/obo/CLO_0001387 | denotes | 4c |
| T113 | 9252-9253 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T114 | 9264-9269 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T115 | 9356-9357 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T116 | 9484-9489 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T117 | 9516-9527 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T118 | 9636-9641 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T119 | 9645-9650 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T120 | 9694-9695 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T121 | 9939-9940 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T122 | 10300-10301 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T123 | 10331-10332 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T124 | 10362-10366 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T125 | 10362-10366 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T126 | 10426-10430 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T127 | 10426-10430 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T128 | 10585-10586 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T129 | 10716-10721 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T130 | 11084-11089 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T131 | 11090-11098 | http://purl.obolibrary.org/obo/NCBITaxon_9443 | denotes | primates |
| T132 | 11238-11241 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T133 | 11461-11462 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T134 | 11786-11790 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T135 | 12138-12153 | http://www.ebi.ac.uk/efo/EFO_0000808 | denotes | anatomical site |
| T136 | 12252-12259 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T137 | 12561-12565 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T138 | 12561-12565 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T139 | 12842-12846 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T140 | 12842-12846 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T141 | 13207-13212 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T142 | 13233-13240 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 8-11 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T2 | 152-155 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T3 | 298-301 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T4 | 1052-1055 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T5 | 1799-1803 | Chemical | denotes | gold | http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050 |
| T7 | 2608-2611 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T8 | 2652-2655 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T9 | 3092-3095 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T10 | 3163-3166 | Chemical | denotes | Man | http://purl.obolibrary.org/obo/CHEBI_37684 |
| T11 | 3167-3170 | Chemical | denotes | Man | http://purl.obolibrary.org/obo/CHEBI_37684 |
| T12 | 3653-3656 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T13 | 3702-3705 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
| T14 | 3734-3737 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
| T15 | 3752-3755 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
| T16 | 3878-3880 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
| T18 | 4036-4038 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
| T20 | 4399-4406 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T21 | 4408-4410 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
| T23 | 4516-4519 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
| T24 | 4847-4854 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T25 | 5330-5333 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T26 | 5530-5542 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T27 | 5538-5542 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T28 | 6516-6519 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T29 | 6830-6842 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T30 | 6838-6842 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T31 | 6893-6896 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T32 | 7572-7575 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T33 | 7863-7875 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T34 | 7871-7875 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T35 | 7910-7919 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T36 | 7924-7947 | Chemical | denotes | anti-inflammatory drugs | http://purl.obolibrary.org/obo/CHEBI_35472 |
| T37 | 7942-7947 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
| T38 | 8589-8592 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T39 | 9180-9192 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T40 | 9188-9192 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T41 | 9308-9317 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T42 | 10025-10028 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T43 | 10307-10313 | Chemical | denotes | tracer | http://purl.obolibrary.org/obo/CHEBI_35204 |
| T44 | 10513-10519 | Chemical | denotes | tracer | http://purl.obolibrary.org/obo/CHEBI_35204 |
| T45 | 10826-10829 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T46 | 11278-11281 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
| T47 | 11806-11818 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T48 | 11814-11818 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T49 | 11999-12011 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T50 | 12007-12011 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T51 | 12729-12732 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 396-401 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T2 | 1691-1696 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T3 | 1698-1703 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T4 | 1705-1724 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T5 | 1726-1733 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T6 | 1739-1746 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T7 | 2513-2518 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T8 | 2752-2757 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T9 | 3224-3229 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T10 | 3231-3242 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T11 | 3243-3248 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T12 | 3250-3257 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T13 | 3259-3268 | Phenotype | denotes | dizziness | http://purl.obolibrary.org/obo/HP_0002321 |
| T14 | 3269-3278 | Phenotype | denotes | Back pain | http://purl.obolibrary.org/obo/HP_0003418 |
| T15 | 3280-3289 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T16 | 3290-3295 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T17 | 3304-3313 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T18 | 3315-3322 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T19 | 3328-3335 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T20 | 4176-4186 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
| T21 | 4198-4208 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
| T22 | 4655-4666 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T23 | 4671-4676 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T24 | 4965-4975 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
| T25 | 4987-4997 | Phenotype | denotes | pneumoniae | http://purl.obolibrary.org/obo/HP_0002090 |
| T26 | 5288-5293 | Phenotype | denotes | tumor | http://purl.obolibrary.org/obo/HP_0002664 |
| T27 | 5963-5981 | Phenotype | denotes | intermittent fever | http://purl.obolibrary.org/obo/HP_0001954 |
| T28 | 6063-6070 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T29 | 6075-6084 | Phenotype | denotes | dizziness | http://purl.obolibrary.org/obo/HP_0002321 |
| T30 | 6086-6091 | Phenotype | denotes | Cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T31 | 6160-6170 | Phenotype | denotes | leukopenia | http://purl.obolibrary.org/obo/HP_0001882 |
| T32 | 7269-7278 | Phenotype | denotes | back pain | http://purl.obolibrary.org/obo/HP_0003418 |
| T33 | 7283-7292 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T34 | 8217-8222 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T35 | 8249-8255 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T36 | 8257-8266 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T37 | 8268-8275 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T38 | 8281-8288 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T39 | 10426-10439 | Phenotype | denotes | lung diseases | http://purl.obolibrary.org/obo/HP_0002088 |
| T40 | 10555-10575 | Phenotype | denotes | pulmonary infections | http://purl.obolibrary.org/obo/HP_0006532 |
| T41 | 10793-10808 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T42 | 11025-11038 | Phenotype | denotes | lymphadenitis | http://purl.obolibrary.org/obo/HP_0002840 |
| T43 | 12600-12609 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 862-868 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T2 | 862-868 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T3 | 1013-1020 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
| T4 | 4585-4591 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T5 | 4585-4591 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T6 | 5390-5396 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T7 | 5390-5396 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T8 | 5727-5733 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T9 | 5727-5733 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T10 | 10314-10320 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T11 | 10314-10320 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T12 | 10520-10526 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T13 | 10520-10526 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T14 | 10874-10880 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T15 | 10874-10880 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T16 | 11252-11259 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
| T17 | 12055-12062 | http://purl.obolibrary.org/obo/GO_0051235 | denotes | storage |
| T18 | 12644-12650 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
| T19 | 12644-12650 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
| T20 | 12847-12854 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
| T21 | 12921-12933 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-76 | Sentence | denotes | 18F-FDG PET/CT findings of COVID-19: a series of four highly suspected cases |
| T2 | 78-86 | Sentence | denotes | Abstract |
| T3 | 87-94 | Sentence | denotes | Purpose |
| T4 | 95-264 | Sentence | denotes | The aim of this case series is to illustrate the 18F-FDG PET/CT findings of patients with acute respiratory disease caused by COVID-19 in Wuhan, Hubei province of China. |
| T5 | 266-273 | Sentence | denotes | Methods |
| T6 | 274-531 | Sentence | denotes | We describe the 18F-FDG PET/CT results from four patients who were admitted to the hospital with respiratory symptoms and fever between January 13 and January 20, 2020, when the COVID-19 outbreak was still unrecognized and the virus infectivity was unknown. |
| T7 | 532-690 | Sentence | denotes | A retrospective review of the patients’ medical history, clinical and laboratory data, as well as imaging findings strongly suggested a diagnosis of COVID-19. |
| T8 | 692-699 | Sentence | denotes | Results |
| T9 | 700-811 | Sentence | denotes | All patients had peripheral ground-glass opacities and/or lung consolidations in more than two pulmonary lobes. |
| T10 | 812-918 | Sentence | denotes | Lung lesions were characterized by a high 18F-FDG uptake and there was evidence of lymph node involvement. |
| T11 | 919-1021 | Sentence | denotes | Conversely, disseminated disease was absent, a finding suggesting that COVID-19 has pulmonary tropism. |
| T12 | 1023-1034 | Sentence | denotes | Conclusions |
| T13 | 1035-1299 | Sentence | denotes | Although 18F-FDG PET/CT cannot be routinely used in an emergency setting and is generally not recommended for infectious diseases, our pilot data shed light on the potential clinical utility of this imaging technique in the differential diagnosis of complex cases. |
| T14 | 1301-1468 | Sentence | denotes | An outbreak of acute respiratory disease caused by a novel coronavirus of zoonotic origin (SARS-CoV-2) occurred during December 2019 in Wuhan, Hubei province of China. |
| T15 | 1469-1570 | Sentence | denotes | Additional cases have been subsequently identified both in other parts of China and worldwide [1, 2]. |
| T16 | 1571-1639 | Sentence | denotes | World Health Organization officially names the disease COVID-19 [3]. |
| T17 | 1640-1754 | Sentence | denotes | Common clinical manifestations of COVID-19 include fever, cough, shortness of breath, myalgia, and fatigue [4, 5]. |
| T18 | 1755-1868 | Sentence | denotes | Although detection of viral RNA remains the gold standard for diagnosis, false-negative results are not uncommon. |
| T19 | 1869-2098 | Sentence | denotes | The possible reasons may include the lack of standard operation procedures (SOPs) and validation across different laboratories for viral identification, different viral loads at different anatomical sites and high mutation rates. |
| T20 | 2099-2424 | Sentence | denotes | Consequently, clinical diagnosis is generally based on exposure history, clinical symptoms, results of blood and biochemical tests, and findings on chest computed tomography (CT)—which typically consist of ground-glass opacities (GGOs) or bilateral pulmonary consolidations in multiple lobular and sub-segmental areas [4, 6]. |
| T21 | 2425-2623 | Sentence | denotes | In general, the identification of pulmonary GGOs or patients presenting with persistent fever should prompt additional diagnostic testing for differential diagnosis—including 18F-FDG PET/CT imaging. |
| T22 | 2624-2886 | Sentence | denotes | Here, we report the 18F-FDG PET/CT findings from four patients who were admitted to the Wuhan Union Hospital with lung GGOs and fever between January 13 and January 20, 2020—when the COVID-19 outbreak was still unrecognized and the virus infectivity was unknown. |
| T23 | 2887-3055 | Sentence | denotes | A retrospective review of the patients’ medical history, clinical and laboratory data, as well as imaging findings (Table 1) strongly suggested a diagnosis of COVID-19. |
| T24 | 3056-3135 | Sentence | denotes | Table 1 General characteristics and PET/CT findings of four cases with COVID-19 |
| T25 | 3136-3158 | Sentence | denotes | Patient number 1 2 3 4 |
| T26 | 3159-3182 | Sentence | denotes | Sex Man Man Woman Woman |
| T27 | 3183-3205 | Sentence | denotes | Age, years 57 56 61 48 |
| T28 | 3206-3335 | Sentence | denotes | Clinical symptoms Fever, sore throat Fever, fatigue, dizziness Back pain, dry cough Fever, chill, dry cough, myalgia, and fatigue |
| T29 | 3336-3379 | Sentence | denotes | History of staying in Wuhan Yes Yes Yes Yes |
| T30 | 3380-3451 | Sentence | denotes | WBC (× 109/L) (reference range 3.5–9.5 × 109/L) Normal 3.33 3.47 Normal |
| T31 | 3452-3519 | Sentence | denotes | Lymphocytes (%) (reference range 20–40%) Normal 17.5% Normal Normal |
| T32 | 3520-3588 | Sentence | denotes | HsCRP (mg/L) (reference range 0–5 mg/L) 6.65 23.6 Not available 12.2 |
| T33 | 3589-3652 | Sentence | denotes | Respiratory pathogens* Negative Negative Not available Negative |
| T34 | 3653-3756 | Sentence | denotes | PET/CT findings Number of affected lobes 2 (RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3 (RML, RLL, LLL) |
| T35 | 3757-3853 | Sentence | denotes | Lung CT features GGO GGO and consolidative opacities GGO GGO with interlobular septal thickening |
| T36 | 3854-3877 | Sentence | denotes | SUVmax 4.6 7.9 12.2 9.3 |
| T37 | 3878-4035 | Sentence | denotes | LN involvement Absent Right subclavian region, mediastinum Right supraclavicular region, mediastinum Right subclavian region, mediastinum, right hilar region |
| T38 | 4036-4057 | Sentence | denotes | LN SUVmax – 7 5.4 5.5 |
| T39 | 4058-4108 | Sentence | denotes | Concomitant diseases** Absent Absent Absent Absent |
| T40 | 4109-4164 | Sentence | denotes | *The following respiratory pathogens were investigated: |
| T41 | 4165-4285 | Sentence | denotes | Mycoplasma pneumoniae, Chlamydia pneumoniae, adenovirus, respiratory syncytial virus, and Coxsackie B-virus specific IgM |
| T42 | 4286-4340 | Sentence | denotes | **Including malignancies and other infectious diseases |
| T43 | 4341-4597 | Sentence | denotes | WBC, white blood cell; hsCRP, high-sensitivity C-reactive protein; LN, lymph node; RUL, right upper lobe; RML, right middle lobe; RLL, right lower lobe; LUL, left upper lobe; LLL, left lower lobe; GGO, ground-glass opacities; SUV, standardized uptake value |
| T44 | 4599-4605 | Sentence | denotes | Case 1 |
| T45 | 4606-4706 | Sentence | denotes | A 57-year-old man living in Wuhan presented with sore throat and fever (39.0 °C) lasting for 3 days. |
| T46 | 4707-4900 | Sentence | denotes | Laboratory testing revealed a white blood cell (WBC) count within the reference range and a slight elevation of high-sensitivity C-reactive protein (hsCRP; 6.65 mg/L, reference range 0–5 mg/L). |
| T47 | 4901-5101 | Sentence | denotes | A search for common respiratory pathogens, including Mycoplasma pneumoniae, Chlamydia pneumoniae, adenovirus, respiratory syncytial virus, and Coxsackie B-virus specific IgM, yielded negative results. |
| T48 | 5102-5321 | Sentence | denotes | A chest CT scan conducted in another hospital 2 days before revealed the presence of a GGO in the right lung, which required further diagnostic workout (differential diagnosis between a tumor and an infectious disease). |
| T49 | 5322-5503 | Sentence | denotes | 18F-FDG PET/CT identified peripheral GGOs with an increased 18F-FDG uptake (SUVmax range 2.2–4.6) in the right upper lung (Fig. 1a, b, arrows) and left lower lung (Fig. 1c; arrows). |
| T50 | 5504-5569 | Sentence | denotes | Unfortunately, SARS-CoV-2 nucleic acid testing was not performed. |
| T51 | 5570-5677 | Sentence | denotes | Antiviral, anti-inflammatory, and symptomatic treatment for 2 weeks led to complete resolution of symptoms. |
| T52 | 5678-5777 | Sentence | denotes | Fig. 1 Peripheral GGOs with an increased 18F-FDG uptake in the right upper lung and left lower lung |
| T53 | 5779-5785 | Sentence | denotes | Case 2 |
| T54 | 5786-6085 | Sentence | denotes | A 56-year-old man with a recent history of surgery for lung repair and rib fracture internal fixation following a traumatic event presented to hospital with an 8-day history of intermittent fever (up to 39.1 °C, more frequent in early morning and the afternoon) accompanied by fatigue and dizziness. |
| T55 | 6086-6126 | Sentence | denotes | Cough and sputum production were absent. |
| T56 | 6127-6296 | Sentence | denotes | Laboratory testing revealed mild leukopenia (WBC count 3.33 × 109/L; reference range 3.5–9.5 × 109/L) with 75.5% neutrophils and 17.5% lymphocytes (normal range 20–40%). |
| T57 | 6297-6507 | Sentence | denotes | Inflammatory indices, including hsCRP (23.6 mg/L) and erythrocyte sedimentation rate (73 mm/h; reference range < 15 mm/h), were increased, but a search for known respiratory pathogens yielded negative findings. |
| T58 | 6508-6671 | Sentence | denotes | 18F-FDG PET/CT imaging (January 13, 2020) revealed multiple FDG-positive GGOs and consolidative opacities in both lungs (SUVmax range 1.8–7.9; Fig. 2a, b, arrows). |
| T59 | 6672-6803 | Sentence | denotes | There were also multiple FDG-avid lymph nodes in the mediastinum and the subclavian region (SUVmax range 4.1–7.0; Fig. 2c, arrows). |
| T60 | 6804-6869 | Sentence | denotes | Unfortunately, SARS-CoV-2 nucleic acid testing was not performed. |
| T61 | 6870-7048 | Sentence | denotes | The lesions on 18F-FDG PET/CT were smaller than those detected on previous CT imaging (January 7, 2020) and regressed further after treatment (January 21, 2020; Fig. 2d, arrows). |
| T62 | 7049-7210 | Sentence | denotes | Fig. 2 Multiple FDG-positive GGOs and consolidative opacities in both lungs as well as multiple FDG-avid lymph nodes in the mediastinum and the subclavian region |
| T63 | 7212-7218 | Sentence | denotes | Case 3 |
| T64 | 7219-7305 | Sentence | denotes | A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. |
| T65 | 7306-7371 | Sentence | denotes | Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). |
| T66 | 7372-7544 | Sentence | denotes | Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. |
| T67 | 7545-7685 | Sentence | denotes | A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). |
| T68 | 7686-7832 | Sentence | denotes | Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). |
| T69 | 7833-7884 | Sentence | denotes | We did not perform SARS-CoV-2 nucleic acid testing. |
| T70 | 7885-7975 | Sentence | denotes | An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement. |
| T71 | 7976-8117 | Sentence | denotes | Fig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region |
| T72 | 8119-8125 | Sentence | denotes | Case 4 |
| T73 | 8126-8289 | Sentence | denotes | A 48-year-old woman working in the Wuhan Union Hospital presented with an 8-day history of fever (37–38 °C) accompanied by chills, dry cough, myalgia, and fatigue. |
| T74 | 8290-8379 | Sentence | denotes | WBC count was within the reference range, but she had increased hsCRP levels (12.2 mg/L). |
| T75 | 8380-8447 | Sentence | denotes | A search for known respiratory pathogens yielded negative findings. |
| T76 | 8448-8567 | Sentence | denotes | Chest CT imaging (January 15, 2020, Fig. 4d) led to the identification of a blurry shadow in the right lower lung lobe. |
| T77 | 8568-8763 | Sentence | denotes | A subsequent 18F-FDG PET/CT scan (January 20, 2020) revealed the presence of peripheral FDG-avid GGOs with interlobular septal thickening in both lungs (SUVmax range 3.7–9.3; Fig. 4a, b, arrows). |
| T78 | 8764-8957 | Sentence | denotes | When compared with previous chest CT results, there was evidence of disease progression as shown by a higher number of lesions, which were also characterized by an increased extent and density. |
| T79 | 8958-9090 | Sentence | denotes | There were also multiple FDG-positive lymph nodes in the mediastinum and right hilar region (SUVmax range 3.8–5.5; Fig. 4c, arrows). |
| T80 | 9091-9251 | Sentence | denotes | Real-time fluorescent polymerase chain reaction (RT-PCR) for the detection of SARS-CoV-2 nucleic acid yielded negative findings in two independent measurements. |
| T81 | 9252-9407 | Sentence | denotes | A follow-up chest CT (February 1, 2020) performed after antiviral and anti-infective treatment revealed a significant improvement in the picture (Fig. 4d). |
| T82 | 9408-9569 | Sentence | denotes | Fig. 4 Peripheral FDG-avid GGOs with interlobular septal thickening in both lungs and multiple FDG-positive lymph nodes in the mediastinum and right hilar region |
| T83 | 9571-9581 | Sentence | denotes | Discussion |
| T84 | 9582-9811 | Sentence | denotes | Because COVID-19 is believed to have an interpersonal human-to-human transmission [2], either home residence or a travel history to Wuhan—coupled with exposure to known or suspected cases—is paramount to raise clinical suspicion. |
| T85 | 9812-9963 | Sentence | denotes | The clinical, laboratory, and imaging characteristics of the four patients described in the current report are consistent with a diagnosis of COVID-19. |
| T86 | 9964-10072 | Sentence | denotes | Herein, we therefore describe for the first time the 18F-FDG PET/CT findings of four patients with COVID-19. |
| T87 | 10073-10262 | Sentence | denotes | In accordance with previously published observations [5, 6], our cases were characterized by the presence of peripheral GGOs and/or consolidative opacities in more than two pulmonary lobes. |
| T88 | 10263-10321 | Sentence | denotes | Notably, all of these lesions showed a high tracer uptake. |
| T89 | 10322-10503 | Sentence | denotes | Although a bilateral involvement of the lung parenchyma can be observed in several benign and malignant lung diseases [7], tumors presenting as GGOs are unlikely to be FDG-avid [8]. |
| T90 | 10504-10730 | Sentence | denotes | The high tracer uptake that characterized COVID-19 pulmonary infections reflects a significant inflammatory burden, similar to that elicited by the Middle East respiratory syndrome or the H1N1 pandemic influenza virus [9, 10]. |
| T91 | 10731-10904 | Sentence | denotes | Although COVID-19 infections do not seem to be accompanied by lymphadenopathy [6], our 18F-FDG PET/CT findings revealed an increased nodal FDG uptake in three of four cases. |
| T92 | 10905-11123 | Sentence | denotes | Although no obvious nodal enlargement was evident, our imaging data indicate for the first time that COVID-19 may cause lymphadenitis—in line with previous data obtained from non-human primates exposed to MERS-CoV [9]. |
| T93 | 11124-11260 | Sentence | denotes | Another interesting finding is that no disseminated lesions were evident in our patients—suggesting that COVID-19 has pulmonary tropism. |
| T94 | 11261-11614 | Sentence | denotes | Although 18F-FDG PET/CT cannot be routinely used in an emergency setting and is generally not recommended for infectious diseases, our current findings demonstrate that this imaging modality may play a complementary diagnostic role in COVID-19—especially at early stages when clinical symptoms are not specific and differential diagnosis is challenging. |
| T95 | 11615-11730 | Sentence | denotes | Our case series is limited by the small sample size and the lack of molecular confirmation of SARS-CoV-2 infection. |
| T96 | 11731-11877 | Sentence | denotes | However, only 30–50% of infected patients had positive test for SARS-CoV-2 nucleic acid on RT-PCR (Chinese Academy of Sciences; unpublished data). |
| T97 | 11878-12315 | Sentence | denotes | High rates of false-negative findings may be explained by several reasons, including (1) the lack of SOPs for SARS-CoV-2 nucleic acid detection, differences in sample handling, storage, and processing, (2) disease stages and different viral loads according to anatomical site (e.g., alveoli versus upper respiratory tract), (3) the lack of independent validation of current testing, and (4) the potential high mutation rates of COVID-19. |
| T98 | 12316-12493 | Sentence | denotes | In light of these limitations, some cases of COVID-19 in China are currently diagnosed on clinical, laboratory, and imaging grounds, without resorting to molecular confirmation. |
| T99 | 12494-12855 | Sentence | denotes | These caveats notwithstanding, we show for the first time that (1) lung lesions of patients with COVID-19 pneumonia are characterized by high 18F-FDG uptake, (2) this condition is accompanied by nodal involvement detectable on 18F-FDG PET/CT imaging, and (3) there is no evidence of disseminated disease, indicating that COVID-19 may have specific lung tropism. |
| T100 | 12857-12933 | Sentence | denotes | This article is part of the Topical Collection on Infection and inflammation |
| T101 | 12934-12950 | Sentence | denotes | Publisher’s note |
| T102 | 12951-13069 | Sentence | denotes | Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. |
| T103 | 13071-13104 | Sentence | denotes | Compliance with ethical standards |
| T104 | 13106-13126 | Sentence | denotes | Conflict of interest |
| T105 | 13127-13186 | Sentence | denotes | The authors declare that they have no conflict of interest. |
| T106 | 13188-13240 | Sentence | denotes | Research involving human participants and/or animals |
| T107 | 13241-13438 | Sentence | denotes | This retrospective study of existing patient data and images was approved by the institutional review board of Union Hospital, Tongji Medical College, Huazhong University of Science and Technology. |
| T108 | 13439-13487 | Sentence | denotes | The requirement for informed consent was waived. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32088847-31524673-29170378 | 10441-10442 | 31524673 | denotes | 7 |
| 32088847-29473946-29170379 | 10500-10501 | 29473946 | denotes | 8 |
| 32088847-26573211-29170380 | 10723-10724 | 26573211 | denotes | 9 |
| 32088847-22911695-29170381 | 10726-10728 | 22911695 | denotes | 10 |
| 32088847-26573211-29170382 | 11120-11121 | 26573211 | denotes | 9 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2 | 0-7 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 3 | 27-35 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 8 | 171-179 | Species | denotes | patients | Tax:9606 |
| 9 | 144-151 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 10 | 185-210 | Disease | denotes | acute respiratory disease | MESH:D012120 |
| 11 | 221-229 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 19 | 323-331 | Species | denotes | patients | Tax:9606 |
| 20 | 562-570 | Species | denotes | patients | Tax:9606 |
| 21 | 290-297 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 22 | 371-391 | Disease | denotes | respiratory symptoms | MESH:D012818 |
| 23 | 396-401 | Disease | denotes | fever | MESH:D005334 |
| 24 | 452-460 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 25 | 681-689 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 30 | 704-712 | Species | denotes | patients | Tax:9606 |
| 31 | 854-861 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 32 | 931-951 | Disease | denotes | disseminated disease | MESH:D009103 |
| 33 | 990-998 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 36 | 1044-1051 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 37 | 1145-1164 | Disease | denotes | infectious diseases | MESH:D003141 |
| 49 | 1354-1371 | Species | denotes | novel coronavirus | Tax:2697049 |
| 50 | 1392-1402 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 51 | 1316-1341 | Disease | denotes | acute respiratory disease | MESH:D012120 |
| 52 | 1375-1383 | Disease | denotes | zoonotic | MESH:D015047 |
| 53 | 1626-1634 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 54 | 1674-1682 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 55 | 1691-1696 | Disease | denotes | fever | MESH:D005334 |
| 56 | 1698-1703 | Disease | denotes | cough | MESH:D003371 |
| 57 | 1705-1724 | Disease | denotes | shortness of breath | MESH:D004417 |
| 58 | 1726-1733 | Disease | denotes | myalgia | MESH:D063806 |
| 59 | 1739-1746 | Disease | denotes | fatigue | MESH:D005221 |
| 73 | 3697-3740 | Gene | denotes | RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3 | |
| 74 | 3136-3143 | Species | denotes | Patient | Tax:9606 |
| 75 | 3171-3176 | Species | denotes | Woman | Tax:9606 |
| 76 | 3177-3182 | Species | denotes | Woman | Tax:9606 |
| 77 | 3589-3600 | Species | denotes | Respiratory | Tax:12814 |
| 78 | 3224-3229 | Disease | denotes | Fever | MESH:D005334 |
| 79 | 3231-3248 | Disease | denotes | sore throat Fever | MESH:D010608 |
| 80 | 3250-3257 | Disease | denotes | fatigue | MESH:D005221 |
| 81 | 3259-3278 | Disease | denotes | dizziness Back pain | MESH:D004244 |
| 82 | 3280-3295 | Disease | denotes | dry cough Fever | MESH:D003371 |
| 83 | 3304-3313 | Disease | denotes | dry cough | MESH:D003371 |
| 84 | 3315-3322 | Disease | denotes | myalgia | MESH:D063806 |
| 85 | 3328-3335 | Disease | denotes | fatigue | MESH:D005221 |
| 87 | 3127-3135 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 93 | 4165-4186 | Species | denotes | Mycoplasma pneumoniae | Tax:2104 |
| 94 | 4188-4208 | Species | denotes | Chlamydia pneumoniae | Tax:83558 |
| 95 | 4210-4220 | Species | denotes | adenovirus | Tax:10508 |
| 96 | 4222-4249 | Species | denotes | respiratory syncytial virus | Tax:12814 |
| 97 | 4124-4135 | Species | denotes | respiratory | Tax:12814 |
| 100 | 4298-4310 | Disease | denotes | malignancies | MESH:D009369 |
| 101 | 4321-4340 | Disease | denotes | infectious diseases | MESH:D003141 |
| 103 | 4388-4406 | Gene | denotes | C-reactive protein | Gene:1401 |
| 114 | 2477-2485 | Species | denotes | patients | Tax:9606 |
| 115 | 2678-2686 | Species | denotes | patients | Tax:9606 |
| 116 | 2917-2925 | Species | denotes | patients | Tax:9606 |
| 117 | 2600-2607 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 118 | 2644-2651 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 119 | 2459-2473 | Disease | denotes | pulmonary GGOs | MESH:D008171 |
| 120 | 2513-2518 | Disease | denotes | fever | MESH:D005334 |
| 121 | 2752-2757 | Disease | denotes | fever | MESH:D005334 |
| 122 | 2807-2815 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 123 | 3046-3054 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 126 | 5696-5700 | Chemical | denotes | GGOs | |
| 127 | 5719-5726 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 141 | 4836-4854 | Gene | denotes | C-reactive protein | Gene:1401 |
| 142 | 4954-4975 | Species | denotes | Mycoplasma pneumoniae | Tax:2104 |
| 143 | 4977-4997 | Species | denotes | Chlamydia pneumoniae | Tax:83558 |
| 144 | 4999-5009 | Species | denotes | adenovirus | Tax:10508 |
| 145 | 5011-5038 | Species | denotes | respiratory syncytial virus | Tax:12814 |
| 146 | 5519-5529 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 147 | 4921-4932 | Species | denotes | respiratory | Tax:12814 |
| 148 | 5322-5329 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 149 | 5382-5389 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 150 | 4655-4666 | Disease | denotes | sore throat | MESH:D010608 |
| 151 | 4671-4676 | Disease | denotes | fever | MESH:D005334 |
| 152 | 5288-5293 | Disease | denotes | tumor | MESH:D009369 |
| 153 | 5301-5319 | Disease | denotes | infectious disease | MESH:D003141 |
| 164 | 6819-6829 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 165 | 6459-6470 | Species | denotes | respiratory | Tax:12814 |
| 166 | 6508-6515 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 167 | 6885-6892 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 168 | 5857-5887 | Disease | denotes | rib fracture internal fixation | MESH:D012253 |
| 169 | 5976-5981 | Disease | denotes | fever | MESH:D005334 |
| 170 | 6063-6070 | Disease | denotes | fatigue | MESH:D005221 |
| 171 | 6075-6084 | Disease | denotes | dizziness | MESH:D004244 |
| 172 | 6086-6091 | Disease | denotes | Cough | MESH:D003371 |
| 173 | 6160-6170 | Disease | denotes | leukopenia | MESH:D007970 |
| 181 | 7233-7238 | Species | denotes | woman | Tax:9606 |
| 182 | 7852-7862 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 183 | 7564-7571 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 184 | 7269-7278 | Disease | denotes | back pain | MESH:D001416 |
| 185 | 7283-7292 | Disease | denotes | dry cough | MESH:D003371 |
| 186 | 7341-7351 | Disease | denotes | leucopenia | MESH:C536227 |
| 187 | 7533-7543 | Disease | denotes | malignancy | MESH:D009369 |
| 196 | 8140-8145 | Species | denotes | woman | Tax:9606 |
| 197 | 9169-9179 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 198 | 8399-8410 | Species | denotes | respiratory | Tax:12814 |
| 199 | 8581-8588 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 200 | 8217-8222 | Disease | denotes | fever | MESH:D005334 |
| 201 | 8257-8266 | Disease | denotes | dry cough | MESH:D003371 |
| 202 | 8268-8275 | Disease | denotes | myalgia | MESH:D063806 |
| 203 | 8281-8288 | Disease | denotes | fatigue | MESH:D005221 |
| 212 | 9636-9641 | Species | denotes | human | Tax:9606 |
| 213 | 9645-9650 | Species | denotes | human | Tax:9606 |
| 214 | 9878-9886 | Species | denotes | patients | Tax:9606 |
| 215 | 10049-10057 | Species | denotes | patients | Tax:9606 |
| 216 | 10017-10024 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 217 | 9590-9598 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 218 | 9954-9962 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 219 | 10063-10071 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 240 | 10925-10930 | Gene | denotes | nodal | Gene:4838 |
| 241 | 10864-10869 | Gene | denotes | nodal | Gene:4838 |
| 242 | 10692-10696 | Species | denotes | H1N1 | Tax:114727 |
| 243 | 10706-10721 | Species | denotes | influenza virus | Tax:11308 |
| 244 | 11084-11089 | Species | denotes | human | Tax:9606 |
| 245 | 11110-11118 | Species | denotes | MERS-CoV | Tax:1335626 |
| 246 | 11204-11212 | Species | denotes | patients | Tax:9606 |
| 247 | 10818-10825 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 248 | 10870-10873 | Chemical | denotes | FDG | MESH:D019788 |
| 249 | 10416-10439 | Disease | denotes | malignant lung diseases | MESH:D008171 |
| 250 | 10445-10451 | Disease | denotes | tumors | MESH:D009369 |
| 251 | 10546-10554 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 252 | 10555-10575 | Disease | denotes | pulmonary infections | MESH:D012141 |
| 253 | 10652-10684 | Disease | denotes | Middle East respiratory syndrome | MESH:D018352 |
| 254 | 10740-10748 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 255 | 10749-10759 | Disease | denotes | infections | MESH:D007239 |
| 256 | 10793-10808 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 257 | 11006-11014 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 258 | 11025-11038 | Disease | denotes | lymphadenitis | MESH:D008199 |
| 259 | 11229-11237 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 263 | 11270-11277 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 264 | 11371-11390 | Disease | denotes | infectious diseases | MESH:D003141 |
| 265 | 11496-11504 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 274 | 11764-11772 | Species | denotes | patients | Tax:9606 |
| 275 | 11795-11805 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 276 | 11988-11998 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 277 | 12182-12193 | Species | denotes | respiratory | Tax:12814 |
| 278 | 11709-11729 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 279 | 11755-11763 | Disease | denotes | infected | MESH:D007239 |
| 280 | 12306-12314 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 281 | 12361-12369 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 289 | 12689-12694 | Gene | denotes | nodal | Gene:4838 |
| 290 | 12577-12585 | Species | denotes | patients | Tax:9606 |
| 291 | 12636-12643 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 292 | 12721-12728 | Chemical | denotes | 18F-FDG | MESH:D019788 |
| 293 | 12591-12609 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
| 294 | 12777-12797 | Disease | denotes | disseminated disease | MESH:D009103 |
| 295 | 12815-12823 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 298 | 12907-12916 | Disease | denotes | Infection | MESH:D007239 |
| 299 | 12921-12933 | Disease | denotes | inflammation | MESH:D007249 |
| 302 | 13207-13212 | Species | denotes | human | Tax:9606 |
| 303 | 13213-13225 | Species | denotes | participants | Tax:9606 |
| 305 | 13278-13285 | Species | denotes | patient | Tax:9606 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32088847-31524673-29170378 | 10441-10442 | 31524673 | denotes | 7 |
| 32088847-29473946-29170379 | 10500-10501 | 29473946 | denotes | 8 |
| 32088847-26573211-29170380 | 10723-10724 | 26573211 | denotes | 9 |
| 32088847-22911695-29170381 | 10726-10728 | 22911695 | denotes | 10 |
| 32088847-26573211-29170382 | 11120-11121 | 26573211 | denotes | 9 |