PMC:7079563 / 20213-21435 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"644","span":{"begin":188,"end":209},"obj":"Species"},{"id":"645","span":{"begin":255,"end":264},"obj":"Species"},{"id":"646","span":{"begin":479,"end":484},"obj":"Species"},{"id":"647","span":{"begin":535,"end":540},"obj":"Species"},{"id":"648","span":{"begin":566,"end":574},"obj":"Species"},{"id":"649","span":{"begin":579,"end":587},"obj":"Species"},{"id":"650","span":{"begin":652,"end":658},"obj":"Species"},{"id":"651","span":{"begin":692,"end":698},"obj":"Species"},{"id":"652","span":{"begin":725,"end":734},"obj":"Species"},{"id":"653","span":{"begin":791,"end":797},"obj":"Species"},{"id":"654","span":{"begin":880,"end":889},"obj":"Species"},{"id":"655","span":{"begin":1048,"end":1054},"obj":"Species"},{"id":"656","span":{"begin":1121,"end":1130},"obj":"Species"},{"id":"657","span":{"begin":1144,"end":1147},"obj":"Species"},{"id":"658","span":{"begin":1210,"end":1216},"obj":"Species"},{"id":"659","span":{"begin":52,"end":71},"obj":"Disease"},{"id":"660","span":{"begin":1029,"end":1047},"obj":"Disease"},{"id":"661","span":{"begin":1201,"end":1209},"obj":"Disease"}],"attributes":[{"id":"A644","pred":"tao:has_database_id","subj":"644","obj":"Tax:33858"},{"id":"A645","pred":"tao:has_database_id","subj":"645","obj":"Tax:2697049"},{"id":"A646","pred":"tao:has_database_id","subj":"646","obj":"Tax:9606"},{"id":"A647","pred":"tao:has_database_id","subj":"647","obj":"Tax:9606"},{"id":"A648","pred":"tao:has_database_id","subj":"648","obj":"Tax:694009"},{"id":"A649","pred":"tao:has_database_id","subj":"649","obj":"Tax:1335626"},{"id":"A650","pred":"tao:has_database_id","subj":"650","obj":"Tax:9606"},{"id":"A651","pred":"tao:has_database_id","subj":"651","obj":"Tax:9837"},{"id":"A652","pred":"tao:has_database_id","subj":"652","obj":"Tax:2697049"},{"id":"A653","pred":"tao:has_database_id","subj":"653","obj":"Tax:9606"},{"id":"A654","pred":"tao:has_database_id","subj":"654","obj":"Tax:2697049"},{"id":"A655","pred":"tao:has_database_id","subj":"655","obj":"Tax:9606"},{"id":"A656","pred":"tao:has_database_id","subj":"656","obj":"Tax:2697049"},{"id":"A657","pred":"tao:has_database_id","subj":"657","obj":"Tax:11118"},{"id":"A658","pred":"tao:has_database_id","subj":"658","obj":"Tax:9606"},{"id":"A659","pred":"tao:has_database_id","subj":"659","obj":"MESH:C000657245"},{"id":"A660","pred":"tao:has_database_id","subj":"660","obj":"MESH:C000657245"},{"id":"A661","pred":"tao:has_database_id","subj":"661","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T72","span":{"begin":62,"end":71},"obj":"Disease"},{"id":"T73","span":{"begin":566,"end":574},"obj":"Disease"},{"id":"T74","span":{"begin":1029,"end":1047},"obj":"Disease"}],"attributes":[{"id":"A72","pred":"mondo_id","subj":"T72","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A73","pred":"mondo_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A74","pred":"mondo_id","subj":"T74","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T137","span":{"begin":299,"end":300},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T138","span":{"begin":317,"end":324},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T139","span":{"begin":410,"end":414},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T140","span":{"begin":430,"end":434},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T141","span":{"begin":479,"end":484},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T142","span":{"begin":517,"end":522},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T143","span":{"begin":528,"end":531},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T144","span":{"begin":535,"end":543},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T145","span":{"begin":604,"end":608},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T146","span":{"begin":652,"end":658},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T147","span":{"begin":692,"end":698},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9837"},{"id":"T148","span":{"begin":759,"end":770},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T149","span":{"begin":791,"end":797},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T150","span":{"begin":857,"end":859},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T151","span":{"begin":863,"end":865},"obj":"http://purl.obolibrary.org/obo/CLO_0001000"},{"id":"T152","span":{"begin":890,"end":893},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T153","span":{"begin":1048,"end":1054},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T154","span":{"begin":1059,"end":1062},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T155","span":{"begin":1140,"end":1143},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T156","span":{"begin":1210,"end":1216},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T157","span":{"begin":1218,"end":1220},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}

{"project":"LitCovid-sentences","denotations":[{"id":"T156","span":{"begin":0,"end":160},"obj":"Sentence"},{"id":"T157","span":{"begin":161,"end":423},"obj":"Sentence"},{"id":"T158","span":{"begin":424,"end":557},"obj":"Sentence"},{"id":"T159","span":{"begin":558,"end":713},"obj":"Sentence"},{"id":"T160","span":{"begin":714,"end":868},"obj":"Sentence"},{"id":"T161","span":{"begin":869,"end":1055},"obj":"Sentence"},{"id":"T162","span":{"begin":1056,"end":1222},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T26","span":{"begin":62,"end":71},"obj":"Phenotype"}],"attributes":[{"id":"A26","pred":"hp_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/HP_0002090"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}

{"project":"2_test","denotations":[{"id":"32087334-31978945-69695010","span":{"begin":151,"end":152},"obj":"31978945"},{"id":"32087334-30531947-69695011","span":{"begin":554,"end":555},"obj":"30531947"},{"id":"32087334-23075143-69695012","span":{"begin":839,"end":841},"obj":"23075143"},{"id":"32087334-12958366-69695013","span":{"begin":845,"end":847},"obj":"12958366"},{"id":"32087334-24172901-69695014","span":{"begin":851,"end":853},"obj":"24172901"},{"id":"32087334-24896817-69695015","span":{"begin":857,"end":859},"obj":"24896817"},{"id":"32087334-24675934-69695016","span":{"begin":863,"end":865},"obj":"24675934"}],"text":"The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20]. In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30]. Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1]. Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively. Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]]. Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans. It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36]."}