PMC:7078825 / 1383-4029
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T53 | 2516-2527 | NCBITaxon:11118 | denotes | coronavirus |
| T52 | 2602-2610 | SP_7 | denotes | COVID-19 |
| T20 | 159-167 | SP_7 | denotes | COVID-19 |
| T19 | 312-320 | SP_7 | denotes | COVID-19 |
| T18 | 377-387 | SP_7 | denotes | SARS-CoV-2 |
| T17 | 497-505 | SP_7 | denotes | COVID-19 |
| T16 | 594-605 | UBERON:0001004 | denotes | respiratory |
| T15 | 674-679 | CL:0000738 | denotes | white |
| T14 | 680-685 | CL:0000738;UBERON:0000178 | denotes | blood |
| T13 | 686-691 | CL:0000738 | denotes | cells |
| T12 | 1342-1353 | NCBITaxon:11118 | denotes | coronavirus |
| T11 | 1645-1656 | NCBITaxon:11118 | denotes | coronavirus |
| T10 | 1771-1782 | NCBITaxon:11118 | denotes | coronavirus |
| T9 | 2100-2111 | NCBITaxon:11118 | denotes | coronavirus |
| T8 | 2267-2275 | SP_7 | denotes | COVID-19 |
| T7 | 2340-2348 | SP_7 | denotes | COVID-19 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 674-691 | Body_part | denotes | white blood cells | http://purl.org/sig/ont/fma/fma62852 |
| T2 | 686-691 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 680-685 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T7 | 51-59 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 159-167 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T9 | 312-320 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T10 | 377-385 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T11 | 497-505 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T12 | 615-624 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T13 | 1315-1325 | Disease | denotes | COVID-2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T14 | 1360-1369 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T15 | 1675-1684 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T16 | 1804-1813 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T17 | 2130-2139 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T18 | 2267-2275 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T19 | 2340-2348 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T20 | 2534-2543 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T21 | 2602-2610 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 281-282 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T7 | 333-334 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T8 | 395-396 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T9 | 427-428 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T10 | 680-691 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood cells |
| T11 | 770-772 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T12 | 1248-1249 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T13 | 1539-1540 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 251-254 | Chemical | denotes | NHC | http://purl.obolibrary.org/obo/CHEBI_51369 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 0-83 | Sentence | denotes | Trends in daily laboratory-confirmed and suspected COVID-19 cases and Internet data |
| T12 | 84-280 | Sentence | denotes | The daily numbers of new laboratory-confirmed cases and suspected cases of COVID-19 were collected from the data published by the National Health Commission of China (NHC, http://www.nhc.gov.cn/). |
| T13 | 281-721 | Sentence | denotes | A laboratory-confirmed case of COVID-19 was defined a patient with positive real-time RT-PCR to SARS-CoV-2, while a suspected case was defined as a patient with history of travelling to Wuhan City or in contact with COVID-19 cases in the 14 days before onset of symptoms and with clinical manifestation of fever, respiratory illness, pneumonia on computed tomography (CT) scan, and/or reduced white blood cells count, but no RT-PCR results. |
| T14 | 722-847 | Sentence | denotes | The study period was set between 16 January and 11 February 2020, because the diagnosis criteria were set on 16 January 2020. |
| T15 | 848-1016 | Sentence | denotes | The results showed that the peak of daily new laboratory-confirmed cases was 3,887 on 4 February and the peak of daily new suspected cases was 5,328 on 5 February 2020. |
| T16 | 1017-1238 | Sentence | denotes | Daily trend data related to specific search terms were acquired from Google Trends, Baidu Index, and Sina Weibo Index by setting the time parameter to ‘2 January to 12 February 2020’ and the location parameter to ‘China’. |
| T17 | 1239-1326 | Sentence | denotes | We chose a period 2 weeks earlier than for the molecular diagnosis data for COVID-2019. |
| T18 | 1327-1399 | Sentence | denotes | Two keywords, ‘coronavirus’ and ‘pneumonia’, were used in Google Trends. |
| T19 | 1400-1584 | Sentence | denotes | The respective Chinese terms, ‘冠状病毒‘ and ‘肺炎’ were used in Baidu Index, the most popular web search engine in China, and Sina Weibo Index, a social media platform widely used in China. |
| T20 | 1585-1711 | Sentence | denotes | The peak number of search queries in Baidu was 682,888 for ‘coronavirus’ and 760,460 for ‘pneumonia’, both on 25 January 2020. |
| T21 | 1712-1840 | Sentence | denotes | The peak number of posts on Sina Weibo was 26,297,746 for ‘coronavirus’ and 30,704,753 for ‘pneumonia’, both on 21 January 2020. |
| T22 | 1841-1950 | Sentence | denotes | Google Trends does not provide the raw number of search queries but the number normalised to the peak number. |
| T23 | 1951-2028 | Sentence | denotes | The peaks for both keywords on Google Trends were reached on 25 January 2020. |
| T24 | 2029-2282 | Sentence | denotes | Figure 1 shows the overall trends of data from the keyword search for ‘coronavirus’ (or ‘冠状病毒’) and ‘pneumonia’ (or ‘肺炎’) via Google Trends, Baidu Index and Sina Weibo Index, and the number of daily new laboratory-confirmed and suspected COVID-19 cases. |
| T25 | 2283-2482 | Sentence | denotes | The data from Baidu Index, Sina Weibo Index and national COVID-19 daily incidence data were also normalised to the peak number, so that the values fall into the same range (0–100) during that period. |
| T26 | 2483-2646 | Sentence | denotes | Figure 1 Searches for keywords ‘coronavirus’ and ‘pneumonia’, obtained via different indices, and number of daily new COVID-19 cases, China, January–February 2020 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 587-592 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T2 | 594-613 | Phenotype | denotes | respiratory illness | http://purl.obolibrary.org/obo/HP_0002086 |
| T3 | 615-624 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T4 | 1360-1369 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T5 | 1675-1684 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T6 | 1804-1813 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T7 | 2130-2139 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T8 | 2534-2543 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 13 | 51-59 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 23 | 335-342 | Species | denotes | patient | Tax:9606 |
| 24 | 377-387 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 25 | 429-436 | Species | denotes | patient | Tax:9606 |
| 26 | 159-167 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 27 | 312-320 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 28 | 497-505 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 29 | 587-592 | Disease | denotes | fever | MESH:D005334 |
| 30 | 594-613 | Disease | denotes | respiratory illness | MESH:D012140 |
| 31 | 615-624 | Disease | denotes | pneumonia | MESH:D011014 |
| 42 | 1118-1122 | Species | denotes | Sina | Tax:647292 |
| 43 | 1342-1353 | Species | denotes | coronavirus | Tax:11118 |
| 44 | 1521-1525 | Species | denotes | Sina | Tax:647292 |
| 45 | 1645-1656 | Species | denotes | coronavirus | Tax:11118 |
| 46 | 1740-1744 | Species | denotes | Sina | Tax:647292 |
| 47 | 1771-1782 | Species | denotes | coronavirus | Tax:11118 |
| 48 | 1315-1325 | Disease | denotes | COVID-2019 | MESH:C000657245 |
| 49 | 1360-1369 | Disease | denotes | pneumonia | MESH:D011014 |
| 50 | 1675-1684 | Disease | denotes | pneumonia | MESH:D011014 |
| 51 | 1804-1813 | Disease | denotes | pneumonia | MESH:D011014 |
| 58 | 2100-2111 | Species | denotes | coronavirus | Tax:11118 |
| 59 | 2186-2190 | Species | denotes | Sina | Tax:647292 |
| 60 | 2310-2314 | Species | denotes | Sina | Tax:647292 |
| 61 | 2130-2139 | Disease | denotes | pneumonia | MESH:D011014 |
| 62 | 2267-2275 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 63 | 2340-2348 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 67 | 2516-2527 | Species | denotes | coronavirus | Tax:11118 |
| 68 | 2534-2543 | Disease | denotes | pneumonia | MESH:D011014 |
| 69 | 2602-2610 | Disease | denotes | COVID-19 | MESH:C000657245 |