PMC:7078824 / 7293-7950
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T31 | 144-167 | Body_part | denotes | upper respiratory tract | http://purl.org/sig/ont/fma/fma45661 |
| T32 | 273-296 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
| T33 | 325-335 | Body_part | denotes | intestines | http://purl.org/sig/ont/fma/fma7199 |
| T34 | 340-345 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T35 | 390-396 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T36 | 571-576 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T31 | 144-167 | Body_part | denotes | upper respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001557 |
| T32 | 150-167 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T33 | 273-296 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T34 | 279-296 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T35 | 325-335 | Body_part | denotes | intestines | http://purl.obolibrary.org/obo/UBERON_0000160 |
| T36 | 340-345 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T37 | 390-396 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T38 | 571-576 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T28 | 190-199 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T29 | 507-515 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T30 | 596-599 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T75 | 35-36 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T76 | 108-113 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T77 | 234-239 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T78 | 273-296 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
| T79 | 325-335 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestines |
| T80 | 325-335 | http://www.ebi.ac.uk/efo/EFO_0000834 | denotes | intestines |
| T81 | 340-345 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T82 | 340-345 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T83 | 361-366 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T84 | 571-576 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 0-83 | Sentence | denotes | Currently, it is difficult to find a reasonable explanation for these observations. |
| T65 | 84-200 | Sentence | denotes | It was assumed that the virus can easily be detected in the upper respiratory tract at the stage of early infection. |
| T66 | 201-350 | Sentence | denotes | When the disease progressed, the virus was more likely to appear in the lower respiratory tract and other locations such as intestines and blood [9]. |
| T67 | 351-447 | Sentence | denotes | Thus, the virus may not be detected in throat swabs, especially for cases without expectoration. |
| T68 | 448-657 | Sentence | denotes | This may explain why some patients had negative RT-PCR for SARS-CoV-2 at initial presentation despite positive findings in chest CT, or positive RT-PCT and negative CT findings at initial presentation [10,11]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32183934-32065057-29323225 | 347-348 | 32065057 | denotes | 9 |
| 32183934-32073353-29323226 | 650-652 | 32073353 | denotes | 10 |
| 32183934-32049601-29323227 | 653-655 | 32049601 | denotes | 11 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 89 | 474-482 | Species | denotes | patients | Tax:9606 |
| 90 | 507-517 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 91 | 190-199 | Disease | denotes | infection | MESH:D007239 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32183934-32065057-29323225 | 347-348 | 32065057 | denotes | 9 |
| 32183934-32073353-29323226 | 650-652 | 32073353 | denotes | 10 |
| 32183934-32049601-29323227 | 653-655 | 32049601 | denotes | 11 |