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PMC:7075884 / 17416-18874 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
675 834-861 Gene denotes Semliki forest virus) E1/E2
676 773-776 Gene denotes Env Gene:100616444
677 1038-1041 Gene denotes Env Gene:100616444
678 506-510 Species denotes EBOV Tax:1570291
679 754-758 Species denotes ZIKV Tax:64320
680 778-782 Species denotes EBOV Tax:1570291
681 784-789 Species denotes Ebola Tax:1570291
682 863-867 Species denotes VEEV Tax:11036
683 869-905 Species denotes Venezuelan Equine Encephalitis Virus Tax:11036
684 930-956 Species denotes Vesicular Stomatitis Virus Tax:11276
685 966-984 Species denotes Epstein Barr Virus Tax:10376
686 800-809 Species denotes Influenza Tax:11320
687 795-798 Species denotes IAV Tax:11320
688 829-832 Species denotes SFV Tax:11033
689 925-928 Species denotes VSV Tax:11276
690 961-964 Species denotes EBV Tax:10376
691 9-11 Chemical denotes GA MESH:C112485
692 210-212 Chemical denotes GA MESH:C112485
693 284-291 Chemical denotes calcein MESH:C007740
694 324-328 Chemical denotes CMAC
695 427-429 Chemical denotes GA MESH:C112485
696 1221-1223 Chemical denotes GA MESH:C112485
697 1264-1266 Chemical denotes GA MESH:C112485
698 1310-1312 Chemical denotes GA MESH:C112485
699 1408-1410 Chemical denotes GA MESH:C112485

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T132 21-25 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T133 72-80 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T134 238-243 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T135 304-309 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T136 339-344 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T137 383-388 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T138 528-535 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T139 580-584 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T140 585-589 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T141 635-639 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T142 640-644 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T143 670-678 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T144 714-722 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T145 728-736 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T146 769-772 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T147 999-1004 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T148 1034-1037 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T149 1074-1078 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T150 1110-1118 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T151 1167-1172 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T152 1285-1292 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T153 1353-1360 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T154 1441-1445 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T155 1446-1450 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T53 760-764 Disease denotes Zika http://purl.obolibrary.org/obo/MONDO_0018661
T54 784-789 Disease denotes Ebola http://purl.obolibrary.org/obo/MONDO_0005737
T55 800-809 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T56 869-899 Disease denotes Venezuelan Equine Encephalitis http://purl.obolibrary.org/obo/MONDO_0006005
T57 930-950 Disease denotes Vesicular Stomatitis http://purl.obolibrary.org/obo/MONDO_0025028
T58 940-950 Disease denotes Stomatitis http://purl.obolibrary.org/obo/MONDO_0004842

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T293 21-25 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T294 83-84 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T295 238-243 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T296 304-309 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T297 339-344 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T298 383-388 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T299 580-584 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T300 585-589 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T301 622-623 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T302 635-639 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T303 640-644 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T304 849-854 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T305 856-858 http://purl.obolibrary.org/obo/CLO_0002857 denotes E1
T306 859-861 http://purl.obolibrary.org/obo/CLO_0002860 denotes E2
T307 880-886 http://purl.obolibrary.org/obo/NCBITaxon_9796 denotes Equine
T308 900-905 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T309 951-956 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T310 979-984 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T311 999-1004 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T312 1072-1073 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T313 1074-1083 http://purl.obolibrary.org/obo/CLO_0000031 denotes cell line
T314 1167-1172 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T315 1250-1257 http://purl.obolibrary.org/obo/CLO_0007225 denotes labeled
T316 1441-1445 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T317 1446-1450 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T420 9-11 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T423 72-80 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T424 210-212 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T427 284-291 Chemical denotes calcein http://purl.obolibrary.org/obo/CHEBI_51903
T428 295-303 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224
T429 427-429 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T432 511-513 Chemical denotes GP http://purl.obolibrary.org/obo/CHEBI_70744
T433 528-535 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T434 670-678 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T435 714-722 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T436 728-736 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T437 790-792 Chemical denotes GP http://purl.obolibrary.org/obo/CHEBI_70744
T438 810-812 Chemical denotes HA http://purl.obolibrary.org/obo/CHEBI_73924
T439 825-827 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T440 1110-1118 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T441 1221-1223 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T444 1264-1266 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T447 1285-1292 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T448 1310-1312 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354
T451 1353-1360 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T452 1408-1410 Chemical denotes GA http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T62 21-32 http://purl.obolibrary.org/obo/GO_0140253 denotes cell fusion
T63 21-32 http://purl.obolibrary.org/obo/GO_0045026 denotes cell fusion
T64 21-32 http://purl.obolibrary.org/obo/GO_0000768 denotes cell fusion
T65 21-32 http://purl.obolibrary.org/obo/GO_0000747 denotes cell fusion
T66 580-596 http://purl.obolibrary.org/obo/GO_0140253 denotes cell-cell fusion
T67 580-596 http://purl.obolibrary.org/obo/GO_0045026 denotes cell-cell fusion
T68 585-596 http://purl.obolibrary.org/obo/GO_0000768 denotes cell fusion
T69 585-596 http://purl.obolibrary.org/obo/GO_0000747 denotes cell fusion
T70 635-651 http://purl.obolibrary.org/obo/GO_0140253 denotes cell-cell fusion
T71 635-651 http://purl.obolibrary.org/obo/GO_0045026 denotes cell-cell fusion
T72 640-651 http://purl.obolibrary.org/obo/GO_0000768 denotes cell fusion
T73 640-651 http://purl.obolibrary.org/obo/GO_0000747 denotes cell fusion
T74 1441-1457 http://purl.obolibrary.org/obo/GO_0140253 denotes cell-cell fusion
T75 1441-1457 http://purl.obolibrary.org/obo/GO_0045026 denotes cell-cell fusion
T76 1446-1457 http://purl.obolibrary.org/obo/GO_0000768 denotes cell fusion
T77 1446-1457 http://purl.obolibrary.org/obo/GO_0000747 denotes cell fusion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T119 0-231 Sentence denotes Figure 5 GA inhibits cell fusion induced by all three classes of fusion proteins. (A) In the two top panels, typical images used to visualize the extent of fusion in the absence (control, left) and presence of GA (right) are shown.
T120 232-382 Sentence denotes Fused cells (light blue, due to mixing of the green calcein in effector cells and dark blue CMAC in target cells) are marked by arrows in the control.
T121 383-430 Sentence denotes Cells did not fuse in the presence of 10 µM GA.
T122 431-484 Sentence denotes The extent of fusion is quantitated in the bar graph.
T123 485-545 Sentence denotes The experiments used EBOV GP as the fusion protein. (n = 3).
T124 546-723 Sentence denotes For all bars of experiments using cell-cell fusion, means ± SEM are shown. (B) Extent of cell-cell fusion induced by fusion proteins from three classes of viral fusion proteins.
T125 724-989 Sentence denotes The proteins for class I are: ZIKV (Zika E), HIV Env, EBOV (Ebola GP), IAV (Influenza HA); for class II: SFV (Semliki forest virus) E1/E2, VEEV (Venezuelan Equine Encephalitis Virus) E; for class III: VSV (Vesicular Stomatitis Virus) G, EBV (Epstein Barr Virus) gB.
T126 990-1119 Sentence denotes Effector cells were transfected (except for HIV Env which was stably expressed in a cell line) with the indicated viral proteins.
T127 1120-1173 Sentence denotes Each was bound and allowed to fuse with target cells.
T128 1174-1267 Sentence denotes The reduction in fusion caused by adding 10 µM GA is shown as low grey bars labeled 10 µM GA.
T129 1268-1458 Sentence denotes For every fusion protein, the presence of GA abolished fusion. n = 3 for each fusion protein. (C) Effect of two different concentrations of GA with different side chains on cell-cell fusion.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 887-899 Phenotype denotes Encephalitis http://purl.obolibrary.org/obo/HP_0002383
T4 940-950 Phenotype denotes Stomatitis http://purl.obolibrary.org/obo/HP_0010280