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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 54-78 Disease denotes Coronavirus Disease 2019 MESH:C000657245
22 255-272 Species denotes novel coronavirus Tax:2697049
23 274-284 Species denotes SARS-CoV-2 Tax:2697049
24 337-342 Species denotes Human Tax:9606
25 346-351 Species denotes human Tax:9606
26 147-156 Disease denotes pneumonia MESH:D011014
27 403-411 Disease denotes COVID-19 MESH:C000657245
28 596-604 Disease denotes COVID-19 MESH:C000657245
29 704-737 Disease denotes Severe Acute Respiratory Syndrome MESH:D045169
30 749-781 Disease denotes Middle East Respiratory Syndrome MESH:D018352
31 783-787 Disease denotes MERS MESH:D018352
32 908-913 Disease denotes fever MESH:D005334
33 915-920 Disease denotes cough MESH:D003371
34 922-937 Disease denotes short of breath MESH:D004417
35 943-963 Disease denotes chest tightness/pain MESH:D002637
36 1019-1031 Disease denotes hypertension MESH:D006973
37 1033-1041 Disease denotes diabetes MESH:D003920
38 1043-1065 Disease denotes coronary heart disease MESH:D003324
39 1067-1086 Disease denotes cerebral infarction MESH:D002544
40 1100-1110 Disease denotes bronchitis MESH:D001991
41 1475-1483 Disease denotes COVID-19 MESH:C000657245
56 1902-1907 Species denotes human Tax:9606
57 1911-1916 Species denotes human Tax:9606
58 2157-2172 Species denotes new coronavirus Tax:2697049
59 2174-2183 Species denotes 2019-nCoV Tax:2697049
60 2399-2409 Species denotes SARS-CoV-2 Tax:2697049
61 1553-1562 Disease denotes pneumonia MESH:D011014
62 1955-1976 Disease denotes nosocomial infections MESH:D003428
63 2226-2235 Disease denotes pneumonia MESH:D011014
64 2285-2309 Disease denotes Coronavirus Disease 2019 MESH:C000657245
65 2311-2319 Disease denotes COVID-19 MESH:C000657245
66 2539-2566 Disease denotes novel coronavirus pneumonia MESH:C000657245
67 2568-2576 Disease denotes COVID-19 MESH:C000657245
68 2697-2703 Disease denotes deaths MESH:D003643
69 3012-3020 Disease denotes COVID-19 MESH:C000657245
71 3185-3193 Disease denotes COVID-19 MESH:C000657245
81 3620-3625 Species denotes human Tax:9606
82 3629-3634 Species denotes human Tax:9606
83 3817-3832 Species denotes new coronavirus Tax:2697049
84 3893-3898 Species denotes human Tax:9606
85 3902-3907 Species denotes human Tax:9606
86 3278-3287 Disease denotes pneumonia MESH:D011014
87 3491-3506 Disease denotes viral pneumonia
88 3754-3769 Disease denotes viral pneumonia
89 3926-3946 Disease denotes nosocomial infection MESH:D003428
94 4677-4685 Species denotes patients Tax:9606
95 4794-4800 Species denotes People Tax:9606
96 4006-4014 Disease denotes COVID-19 MESH:C000657245
97 4581-4590 Disease denotes pneumonia MESH:D011014
110 5130-5138 Species denotes patients Tax:9606
111 5235-5243 Species denotes patients Tax:9606
112 5319-5327 Species denotes patients Tax:9606
113 4831-4839 Disease denotes COVID-19 MESH:C000657245
114 4863-4872 Disease denotes mortality MESH:D003643
115 4939-4972 Disease denotes Severe Acute Respiratory Syndrome MESH:D045169
116 5019-5051 Disease denotes Middle East Respiratory Syndrome MESH:D018352
117 5053-5057 Disease denotes MERS MESH:D018352
118 5142-5150 Disease denotes COVID-19 MESH:C000657245
119 5162-5166 Disease denotes MERS MESH:D018352
120 5217-5225 Disease denotes COVID-19 MESH:C000657245
121 5230-5234 Disease denotes MERS MESH:D018352
129 5547-5555 Species denotes patients Tax:9606
130 5579-5587 Species denotes patients Tax:9606
131 5702-5708 Species denotes People Tax:9606
132 5454-5476 Disease denotes Corona Virus Pneumonia
133 5513-5522 Disease denotes infection MESH:D007239
134 5538-5546 Disease denotes COVID-19 MESH:C000657245
135 5614-5623 Disease denotes infection MESH:D007239
166 5796-5807 Species denotes Coronavirus Tax:11118
167 5895-5908 Species denotes Coronaviridae Tax:11118
168 6010-6021 Species denotes coronavirus Tax:11118
169 6105-6118 Species denotes coronaviruses Tax:11118
170 6135-6141 Species denotes humans Tax:9606
171 6243-6254 Species denotes coronavirus Tax:11118
172 6262-6265 Species denotes CoV Tax:11118
173 6272-6328 Species denotes severe acute respiratory syndrome-associated coronavirus Tax:694009
174 6330-6339 Species denotes SARSr-CoV Tax:694009
175 6365-6376 Species denotes coronavirus Tax:11118
176 6422-6430 Species denotes patients Tax:9606
177 6485-6496 Species denotes coronavirus Tax:11118
178 6498-6508 Species denotes SARS-CoV-2 Tax:2697049
179 6556-6566 Species denotes SARS-CoV-2 Tax:2697049
180 6604-6607 Species denotes CoV Tax:11118
181 6612-6621 Species denotes SARSr-CoV Tax:694009
182 6646-6657 Species denotes coronavirus Tax:11118
183 6668-6674 Species denotes humans Tax:9606
184 6713-6726 Species denotes coronaviruses Tax:11118
185 6776-6786 Species denotes SARS-CoV-2 Tax:2697049
186 6826-6841 Species denotes bat coronavirus Tax:1508220
187 6882-6891 Species denotes SARSr-CoV Tax:694009
188 6938-6941 Species denotes CoV Tax:11118
189 6998-7008 Species denotes SARS-CoV-2 Tax:2697049
190 7101-7106 Species denotes human Tax:9606
191 6153-6157 Species denotes 229E Tax:11137
192 6162-6166 Species denotes NL63 Tax:277944
193 6199-6231 Disease denotes Middle East respiratory syndrome MESH:D018352
194 6449-6458 Disease denotes pneumonia MESH:D011014
195 6589-6597 Disease denotes zoonotic MESH:D015047
207 7370-7379 Gene denotes S protein Gene:43740568
208 7466-7475 Gene denotes S-protein Gene:43740568
209 7517-7548 Gene denotes angiotensin-converting enzyme 2 Gene:59272
210 7550-7554 Gene denotes ACE2 Gene:59272
211 7663-7672 Gene denotes S-protein Gene:43740568
212 7673-7677 Gene denotes ACE2 Gene:59272
213 7231-7240 Gene denotes S protein Gene:43740568
214 7115-7126 Species denotes Coronavirus Tax:11118
215 7455-7465 Species denotes SARS-CoV-2 Tax:2697049
216 7511-7516 Species denotes human Tax:9606
217 7637-7642 Species denotes human Tax:9606
228 7762-7775 Species denotes coronaviruses Tax:11118
229 7807-7815 Species denotes SARS-CoV Tax:694009
230 7820-7828 Species denotes MERS-CoV Tax:1335626
231 7834-7847 Species denotes coronaviruses Tax:11118
232 7922-7927 Chemical denotes ether MESH:D004986
233 7933-7940 Chemical denotes ethanol MESH:D000431
234 7942-7950 Chemical denotes chlorine MESH:D002713
235 7965-7979 Chemical denotes peracetic acid MESH:D010463
236 7985-7995 Chemical denotes chloroform MESH:D002725
237 8042-8055 Chemical denotes chlorhexidine MESH:D002710
239 8094-8102 Disease denotes COVID-19 MESH:C000657245
263 8282-8288 Species denotes People Tax:9606
264 8547-8555 Species denotes patients Tax:9606
265 8766-8774 Species denotes patients Tax:9606
266 8841-8849 Species denotes patients Tax:9606
267 8928-8936 Species denotes patients Tax:9606
268 8979-8987 Species denotes patients Tax:9606
269 9050-9058 Species denotes patients Tax:9606
270 9067-9075 Species denotes patients Tax:9606
271 9118-9126 Species denotes Children Tax:9606
272 8184-8211 Disease denotes Novel Coronavirus Pneumonia MESH:C000657245
273 8390-8395 Disease denotes Fever MESH:D005334
274 8397-8404 Disease denotes fatigue MESH:D005221
275 8412-8421 Disease denotes dry cough MESH:D003371
276 8457-8468 Disease denotes obstruction MESH:D000402
277 8492-8518 Disease denotes upper respiratory symptoms MESH:D012818
278 8566-8573 Disease denotes dyspnea MESH:D004417
279 8630-8665 Disease denotes acute respiratory distress syndrome MESH:D012128
280 8667-8679 Disease denotes septic shock MESH:D012772
281 8697-8715 Disease denotes metabolic acidosis MESH:D000138
282 8721-8744 Disease denotes coagulation dysfunction MESH:D001778
283 8803-8808 Disease denotes fever MESH:D005334
284 8829-8834 Disease denotes fever MESH:D005334
285 8879-8884 Disease denotes fever MESH:D005334
301 9407-9416 Gene denotes myoglobin Gene:4151
302 9497-9515 Gene denotes C-reactive protein Gene:1401
303 9517-9520 Gene denotes CRP Gene:1401
304 9766-9769 Gene denotes IL2 Gene:3558
305 9771-9774 Gene denotes IL7 Gene:3574
306 9776-9780 Gene denotes IL10 Gene:3586
307 9788-9792 Gene denotes IP10 Gene:3627
308 9794-9798 Gene denotes MCP1 Gene:6347
309 9800-9805 Gene denotes MIP1a Gene:6348
310 9811-9816 Gene denotes TNF-α Gene:7124
311 9338-9346 Species denotes patients Tax:9606
312 9474-9482 Species denotes patients Tax:9606
313 9611-9619 Species denotes patients Tax:9606
314 9735-9743 Species denotes patients Tax:9606
315 9836-9844 Species denotes patients Tax:9606
320 9875-9883 Species denotes patients Tax:9606
321 9997-10005 Species denotes patients Tax:9606
322 9898-9907 Disease denotes pneumonia MESH:D011014
323 10259-10275 Disease denotes pleural effusion MESH:D010996
370 12108-12116 Species denotes patients Tax:9606
371 10519-10525 Disease denotes deaths MESH:D003643
372 10562-10567 Disease denotes fever MESH:D005334
373 10577-10582 Disease denotes cough MESH:D003371
374 10601-10607 Disease denotes breath MESH:D004417
375 10617-10637 Disease denotes chest tightness/pain MESH:D002637
376 10647-10654 Disease denotes fatigue MESH:D005221
377 10664-10671 Disease denotes dyspnea MESH:D004417
378 10681-10690 Disease denotes dizziness MESH:D004244
379 10691-10699 Disease denotes headache MESH:D006261
380 10716-10720 Disease denotes pain MESH:D010146
381 10886-10898 Disease denotes hypertension MESH:D006973
382 10908-10916 Disease denotes diabetes MESH:D003920
383 10926-10948 Disease denotes coronary heart disease MESH:D003324
384 10958-10977 Disease denotes cerebral infarction MESH:D002544
385 10995-11005 Disease denotes bronchitis MESH:D001991
386 11018-11037 Disease denotes Parkinson’s disease MESH:D010300
387 11136-11141 Disease denotes fever MESH:D005334
388 11149-11154 Disease denotes cough MESH:D003371
389 11172-11181 Disease denotes pneumonia MESH:D011014
390 11198-11204 Disease denotes breath MESH:D004417
391 11212-11223 Disease denotes muscle ache MESH:D063806
392 11247-11255 Disease denotes headache MESH:D006261
393 11262-11273 Disease denotes sore throat MESH:D010608
394 11280-11291 Disease denotes rhinorrhoea
395 11298-11308 Disease denotes chest pain MESH:D002637
396 11315-11324 Disease denotes diarrhoea MESH:D003967
397 11335-11341 Disease denotes nausea MESH:D009325
398 11346-11354 Disease denotes vomiting MESH:D014839
399 11460-11469 Disease denotes pneumonia MESH:D011014
400 11478-11483 Disease denotes fever MESH:D005334
401 11491-11496 Disease denotes cough MESH:D003371
402 11504-11515 Disease denotes lymphopenia MESH:D008231
403 11523-11530 Disease denotes Dyspnea MESH:D004417
404 11538-11545 Disease denotes fatigue MESH:D005221
405 11578-11586 Disease denotes headache MESH:D006261
406 11593-11603 Disease denotes hemoptysis MESH:D006469
407 11614-11622 Disease denotes diarrhea MESH:D003967
408 11666-11674 Disease denotes diabetes MESH:D003920
409 11682-11694 Disease denotes hypertension MESH:D006973
410 11706-11728 Disease denotes cardiovascular disease MESH:D002318
411 11881-11893 Disease denotes hypertension MESH:D006973
412 11895-11903 Disease denotes diabetes MESH:D003920
413 11909-11932 Disease denotes coronary heart diseases MESH:D003324
414 12090-12095 Disease denotes death MESH:D003643
415 12099-12107 Disease denotes COVID-19 MESH:C000657245
417 12135-12143 Disease denotes COVID-19 MESH:C000657245
419 12251-12257 Species denotes People Tax:9606
426 12628-12636 Species denotes patients Tax:9606
427 12702-12710 Species denotes patients Tax:9606
428 12716-12721 Disease denotes fever MESH:D005334
429 12726-12746 Disease denotes respiratory symptoms MESH:D012818
430 12852-12857 Disease denotes fever MESH:D005334
431 12901-12910 Disease denotes pneumonia MESH:D011014
434 13190-13200 Species denotes SARS-CoV-2 Tax:2697049
435 13343-13351 Species denotes patients Tax:9606
437 13433-13442 Disease denotes pneumonia MESH:D011014
441 13492-13497 Disease denotes fever MESH:D005334
442 13499-13519 Disease denotes respiratory symptoms MESH:D012818
443 13525-13534 Disease denotes pneumonia MESH:D011014
448 13690-13696 Chemical denotes oxygen MESH:D010100
449 13795-13801 Chemical denotes oxygen MESH:D010100
450 13846-13852 Chemical denotes oxygen MESH:D010100
451 13620-13627 Disease denotes dyspnea MESH:D004417
453 13917-13936 Disease denotes respiratory failure MESH:D012131
455 14274-14282 Disease denotes COVID-19 MESH:C000657245
458 14759-14764 Chemical denotes water MESH:D014867
459 14881-14887 Chemical denotes oxygen MESH:D010100
462 14953-14971 Gene denotes C-reactive protein Gene:1401
463 14973-14976 Gene denotes CRP Gene:1401
468 15176-15182 Chemical denotes oxygen MESH:D010100
469 15210-15216 Chemical denotes oxygen MESH:D010100
470 15244-15250 Chemical denotes oxygen MESH:D010100
471 15314-15320 Chemical denotes oxygen MESH:D010100
474 15474-15479 Gene denotes IFN-α Gene:3439
475 15563-15582 Chemical denotes Lopinavir/Ritonavir MESH:C558899
477 15872-15881 Disease denotes infection MESH:D007239
479 15884-15887 Gene denotes 6.3 Gene:55558
481 16053-16072 Disease denotes secondary infection MESH:D060085
486 16233-16240 Species denotes patient Tax:9606
487 16377-16384 Species denotes patient Tax:9606
488 16337-16345 Disease denotes coughing MESH:D003371
489 16601-16612 Disease denotes lung injury MESH:D055370
492 17095-17113 Chemical denotes methylprednisolone MESH:D008775
493 16929-16936 Disease denotes dyspnea MESH:D004417
500 17783-17791 Species denotes patients Tax:9606
501 18367-18375 Species denotes patients Tax:9606
502 18747-18755 Species denotes patients Tax:9606
503 17251-17259 Disease denotes COVID-19 MESH:C000657245
504 17570-17575 Disease denotes Fever MESH:D005334
505 18358-18366 Disease denotes COVID-19 MESH:C000657245
525 19203-19220 Species denotes novel coronavirus Tax:2697049
526 19227-19236 Species denotes 2019-nCoV Tax:2697049
527 19263-19273 Species denotes SARS-CoV-2 Tax:2697049
528 19348-19357 Species denotes SARSr-CoV Tax:694009
529 19364-19367 Species denotes CoV Tax:11118
530 19411-19420 Species denotes SARSr-CoV Tax:694009
531 19431-19434 Species denotes CoV Tax:11118
532 19436-19446 Species denotes SARS-CoV-2 Tax:2697049
533 19482-19490 Species denotes patients Tax:9606
534 19169-19178 Disease denotes pneumonia MESH:D011014
535 19469-19478 Disease denotes mortality MESH:D003643
536 19512-19521 Disease denotes infection MESH:D007239
537 19576-19603 Disease denotes novel coronavirus pneumonia MESH:C000657245
538 19626-19638 Disease denotes hypertension MESH:D006973
539 19640-19648 Disease denotes diabetes MESH:D003920
540 19650-19672 Disease denotes coronary heart disease MESH:D003324
541 19674-19693 Disease denotes cerebral infarction MESH:D002544
542 19707-19717 Disease denotes bronchitis MESH:D001991
543 19770-19775 Disease denotes death MESH:D003643
548 19842-19848 Species denotes people Tax:9606
549 19886-19892 Species denotes people Tax:9606
550 20087-20095 Disease denotes COVID-19 MESH:C000657245
551 20176-20194 Disease denotes infectious disease MESH:D003141
563 20699-20704 Species denotes human Tax:9606
564 20708-20713 Species denotes human Tax:9606
565 20835-20843 Species denotes patients Tax:9606
566 20872-20880 Species denotes patients Tax:9606
567 21042-21050 Species denotes patients Tax:9606
568 21240-21248 Species denotes patients Tax:9606
569 20497-20505 Disease denotes COVID-19 MESH:C000657245
570 21097-21106 Disease denotes infection MESH:D007239
571 21122-21131 Disease denotes infection MESH:D007239
572 21166-21186 Disease denotes nosocomial infection MESH:D003428
573 21386-21413 Disease denotes novel coronavirus pneumonia MESH:C000657245
651 22830-22854 Disease denotes Coronavirus Disease 2019 MESH:C000657245
652 22856-22864 Disease denotes COVID-19 MESH:C000657245
653 22949-22955 Disease denotes deaths MESH:D003643
672 23431-23439 Species denotes patients Tax:9606
673 23440-23444 Disease denotes died MESH:D003643
674 23448-23456 Disease denotes COVID-19 MESH:C000657245
675 23515-23520 Disease denotes fever MESH:D005334
676 23530-23535 Disease denotes cough MESH:D003371
677 23545-23564 Disease denotes shortness of breath MESH:D004417
678 23574-23594 Disease denotes chest tightness/pain MESH:D002637
679 23604-23611 Disease denotes fatigue MESH:D005221
680 23621-23628 Disease denotes dyspnea MESH:D004417
681 23638-23647 Disease denotes dizziness MESH:D004244
682 23648-23656 Disease denotes headache MESH:D006261
683 23673-23677 Disease denotes pain MESH:D010146
684 23769-23781 Disease denotes hypertension MESH:D006973
685 23791-23799 Disease denotes diabetes MESH:D003920
686 23809-23831 Disease denotes coronary heart disease MESH:D003324
687 23841-23860 Disease denotes cerebral infarction MESH:D002544
688 23878-23888 Disease denotes bronchitis MESH:D001991
689 23902-23921 Disease denotes Parkinson’s disease MESH:D010300
694 24180-24201 Disease denotes Coronavirus Infection MESH:D018352
695 24267-24273 Disease denotes Deaths MESH:D003643
696 24357-24365 Disease denotes COVID-19 MESH:C000657245
697 24534-24538 Disease denotes MERS MESH:D018352
699 24147-24168 Disease denotes coronavirus infection MESH:D018352
704 24623-24647 Disease denotes coronavirus disease 2019 MESH:C000657245
705 24655-24688 Disease denotes severe acute respiratory syndrome MESH:D045169
706 24690-24694 Disease denotes MERS MESH:D018352
707 24696-24728 Disease denotes Middle East respiratory syndrome MESH:D018352
711 25105-25113 Disease denotes COVID-19 MESH:C000657245
712 25184-25193 Disease denotes infection MESH:D007239
713 26065-26086 Disease denotes nosocomial infections MESH:D003428
715 24941-24949 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 943-948 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T2 1052-1057 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T3 5836-5839 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T4 5998-6004 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T5 6395-6418 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T6 6748-6754 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T7 7233-7240 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T8 7343-7351 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T9 7372-7379 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T10 7380-7384 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T11 7468-7475 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T12 7665-7672 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T13 8476-8480 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T14 9239-9249 Body_part denotes leukocytes http://purl.org/sig/ont/fma/fma62852
T15 9264-9269 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T16 9298-9308 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T17 9374-9379 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T18 9388-9394 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558
T19 9453-9461 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T20 9508-9515 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T21 9526-9537 Body_part denotes erythrocyte http://purl.org/sig/ont/fma/fma62845
T22 9690-9695 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T23 9696-9706 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T24 9749-9755 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T25 9766-9769 Body_part denotes IL2 http://purl.org/sig/ont/fma/fma84051
T26 9857-9862 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T27 9913-9918 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T28 9950-9954 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T29 10201-10206 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T30 10225-10229 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 10617-10622 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T32 10935-10940 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T33 11212-11218 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558
T34 11267-11273 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T35 11298-11303 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T36 11553-11559 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T37 11918-11923 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T38 12865-12882 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T39 13030-13040 Body_part denotes leukocytes http://purl.org/sig/ont/fma/fma62852
T40 13055-13065 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T41 13201-13204 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T42 13229-13233 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T43 13255-13261 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T44 13263-13269 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T45 13276-13299 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T46 13460-13465 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T47 13552-13557 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T48 13683-13689 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T49 14024-14029 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T50 14102-14107 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T51 14874-14880 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T52 14923-14928 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T53 14938-14943 Body_part denotes urine http://purl.org/sig/ont/fma/fma12274
T54 14964-14971 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T55 15002-15007 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T56 15080-15094 Body_part denotes arterial blood http://purl.org/sig/ont/fma/fma83066
T57 15134-15139 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T58 15337-15341 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T59 16091-16096 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T60 16456-16460 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T61 16601-16605 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T62 16957-16962 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T63 17664-17668 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T64 19659-19664 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T65 23574-23579 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T66 23818-23823 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 943-948 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T2 1052-1057 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T3 6395-6418 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T4 6401-6418 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T5 8476-8480 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T6 9264-9269 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T7 9374-9379 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T8 9690-9695 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T9 9857-9862 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T10 9913-9918 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 9950-9954 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 10225-10229 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 10259-10275 Body_part denotes pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175
T14 10617-10622 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T15 10935-10940 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T16 11267-11273 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T17 11298-11303 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T18 11553-11559 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T19 11918-11923 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T20 12865-12882 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T21 13255-13261 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T22 13263-13269 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T23 13276-13299 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T24 13282-13299 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T25 13460-13465 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T26 13552-13557 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T27 13683-13689 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T28 14024-14029 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T29 14102-14107 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T30 14874-14880 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T31 14923-14928 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T32 14938-14943 Body_part denotes urine http://purl.obolibrary.org/obo/UBERON_0001088
T33 15002-15007 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T34 15080-15094 Body_part denotes arterial blood http://purl.obolibrary.org/obo/UBERON_0013755
T35 15089-15094 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T36 15134-15139 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T37 15337-15341 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T38 16091-16096 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T39 16456-16460 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T40 16601-16605 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T41 16957-16962 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T42 19659-19664 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T43 23574-23579 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T44 23818-23823 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p17732s22 9298-9314 CPA denotes lymphocyte count
p17732s25 9318-9327 NegReg denotes decreased
p17734s9 9643-9650 MPA denotes D-dimer
p17770s17 13045-13054 NegReg denotes decreased

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 54-78 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T2 147-156 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T3 274-282 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T4 274-278 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T5 403-411 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 596-604 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 704-737 Disease denotes Severe Acute Respiratory Syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T8 739-743 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T9 1019-1031 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T10 1033-1041 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T11 1043-1065 Disease denotes coronary heart disease http://purl.obolibrary.org/obo/MONDO_0005010
T12 1052-1065 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T13 1067-1086 Disease denotes cerebral infarction http://purl.obolibrary.org/obo/MONDO_0002679|http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057|http://purl.obolibrary.org/obo/MONDO_0020671
T17 1092-1110 Disease denotes chronic bronchitis http://purl.obolibrary.org/obo/MONDO_0005607
T18 1100-1110 Disease denotes bronchitis http://purl.obolibrary.org/obo/MONDO_0003781
T19 1475-1483 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 1553-1562 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T21 1955-1976 Disease denotes nosocomial infections http://purl.obolibrary.org/obo/MONDO_0043544
T22 2226-2235 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T23 2285-2309 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T24 2311-2319 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T25 2399-2407 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T26 2399-2403 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 2557-2566 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T28 2568-2576 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 3012-3020 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T30 3185-3193 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T31 3278-3287 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T32 3491-3506 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T33 3497-3506 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T34 3754-3769 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T35 3760-3769 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T36 3926-3946 Disease denotes nosocomial infection http://purl.obolibrary.org/obo/MONDO_0043544
T37 3937-3946 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 4006-4014 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 4581-4590 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T40 4831-4839 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T41 4939-4972 Disease denotes Severe Acute Respiratory Syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T42 4974-4978 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 5142-5150 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T44 5152-5156 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T45 5217-5225 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 5314-5318 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 5461-5476 Disease denotes Virus Pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T48 5467-5476 Disease denotes Pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T49 5513-5522 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T50 5538-5546 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 5614-5623 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T52 6272-6305 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T53 6449-6458 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T54 6498-6506 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T55 6498-6502 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T56 6556-6564 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 6556-6560 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T58 6776-6784 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T59 6776-6780 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T60 6998-7006 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T61 6998-7002 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T62 7455-7463 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T63 7455-7459 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T64 7807-7815 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 7807-7811 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T66 8094-8102 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T67 8202-8211 Disease denotes Pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T68 8470-8480 Disease denotes runny nose http://purl.obolibrary.org/obo/MONDO_0003014
T69 8630-8665 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T70 8636-8665 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T71 8697-8715 Disease denotes metabolic acidosis http://purl.obolibrary.org/obo/MONDO_0000440
T72 8707-8715 Disease denotes acidosis http://purl.obolibrary.org/obo/MONDO_0006022
T73 9898-9907 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T74 10886-10898 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T75 10908-10916 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T76 10926-10948 Disease denotes coronary heart disease http://purl.obolibrary.org/obo/MONDO_0005010
T77 10935-10948 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T78 10958-10977 Disease denotes cerebral infarction http://purl.obolibrary.org/obo/MONDO_0002679|http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057|http://purl.obolibrary.org/obo/MONDO_0020671
T82 10987-11005 Disease denotes chronic bronchitis http://purl.obolibrary.org/obo/MONDO_0005607
T83 10995-11005 Disease denotes bronchitis http://purl.obolibrary.org/obo/MONDO_0003781
T84 11018-11037 Disease denotes Parkinson’s disease http://purl.obolibrary.org/obo/MONDO_0005180
T85 11172-11181 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T86 11262-11273 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T87 11315-11324 Disease denotes diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T88 11460-11469 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T89 11504-11515 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T90 11614-11622 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T91 11666-11674 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T92 11682-11694 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T93 11706-11728 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T94 11881-11893 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T95 11895-11903 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T96 11909-11932 Disease denotes coronary heart diseases http://purl.obolibrary.org/obo/MONDO_0005010
T97 12099-12107 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T98 12135-12143 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T99 12901-12910 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T100 13190-13198 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T101 13190-13194 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T102 13433-13442 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T103 13525-13534 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T104 13917-13936 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T105 14274-14282 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T106 15862-15881 Disease denotes bacterial infection http://purl.obolibrary.org/obo/MONDO_0005113
T107 15872-15881 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T108 16063-16072 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T109 16606-16612 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T110 17251-17259 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T111 18358-18366 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T112 19169-19178 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T113 19263-19271 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T114 19263-19267 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T115 19436-19444 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T116 19436-19440 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T117 19512-19521 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T118 19594-19603 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T119 19626-19638 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T120 19640-19648 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T121 19650-19672 Disease denotes coronary heart disease http://purl.obolibrary.org/obo/MONDO_0005010
T122 19659-19672 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T123 19674-19693 Disease denotes cerebral infarction http://purl.obolibrary.org/obo/MONDO_0002679|http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057|http://purl.obolibrary.org/obo/MONDO_0020671
T127 19699-19717 Disease denotes chronic bronchitis http://purl.obolibrary.org/obo/MONDO_0005607
T128 19707-19717 Disease denotes bronchitis http://purl.obolibrary.org/obo/MONDO_0003781
T129 19811-19815 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T130 19915-19919 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T131 20070-20074 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T132 20087-20095 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T133 20176-20194 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T134 20497-20505 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T135 21097-21106 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T136 21122-21131 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T137 21166-21186 Disease denotes nosocomial infection http://purl.obolibrary.org/obo/MONDO_0043544
T138 21177-21186 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T139 21404-21413 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T140 21425-21429 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T141 22830-22854 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T142 22856-22864 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T143 23448-23456 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T144 23769-23781 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T145 23791-23799 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T146 23809-23831 Disease denotes coronary heart disease http://purl.obolibrary.org/obo/MONDO_0005010
T147 23818-23831 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T148 23841-23860 Disease denotes cerebral infarction http://purl.obolibrary.org/obo/MONDO_0002679|http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057|http://purl.obolibrary.org/obo/MONDO_0020671
T152 23870-23888 Disease denotes chronic bronchitis http://purl.obolibrary.org/obo/MONDO_0005607
T153 23878-23888 Disease denotes bronchitis http://purl.obolibrary.org/obo/MONDO_0003781
T154 23902-23921 Disease denotes Parkinson’s disease http://purl.obolibrary.org/obo/MONDO_0005180
T155 24159-24168 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T156 24192-24201 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T157 24357-24365 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T158 24456-24460 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T159 24613-24621 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T160 24623-24647 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T161 24649-24653 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T162 24655-24688 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T163 24941-24949 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T164 25105-25113 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T165 25184-25193 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T166 26065-26086 Disease denotes nosocomial infections http://purl.obolibrary.org/obo/MONDO_0043544

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 162-163 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 253-254 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T3 337-342 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T4 346-351 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T5 428-440 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T6 503-505 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T7 617-618 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 827-829 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T9 943-948 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T10 1052-1057 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T11 1052-1057 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T12 1052-1057 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T13 1052-1057 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T14 1130-1135 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 1225-1228 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T16 1264-1267 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T17 1278-1279 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 1540-1541 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 1646-1648 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T20 1723-1728 http://purl.obolibrary.org/obo/PR_000001318 denotes sells
T21 1772-1779 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T22 1902-1907 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T23 1911-1916 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T24 2083-2086 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T25 2155-2156 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 2337-2349 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T27 2375-2380 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T28 2456-2463 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T29 2484-2485 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 2517-2519 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T31 2603-2605 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T32 2818-2819 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T33 2894-2895 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 2932-2935 http://purl.obolibrary.org/obo/PR_000001343 denotes aim
T35 2966-2967 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 3258-3259 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 3338-3340 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T38 3620-3625 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T39 3629-3634 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T40 3661-3663 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T41 3705-3706 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 3815-3816 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 3893-3898 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T44 3902-3907 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T45 4166-4168 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T46 4246-4248 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T47 4663-4664 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 5279-5286 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T49 5297-5302 http://purl.obolibrary.org/obo/UBERON_0003101 denotes males
T50 5297-5302 http://www.ebi.ac.uk/efo/EFO_0000970 denotes males
T51 5363-5368 http://purl.obolibrary.org/obo/UBERON_0003101 denotes males
T52 5363-5368 http://www.ebi.ac.uk/efo/EFO_0000970 denotes males
T53 5381-5388 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T54 5461-5466 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T55 5743-5748 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T56 5811-5812 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 5849-5854 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T58 6135-6141 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T59 6395-6418 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T60 6471-6472 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 6668-6674 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T62 6787-6790 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T63 6826-6829 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T64 6858-6860 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T65 6897-6898 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T66 6943-6945 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T67 6959-6960 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 6961-6967 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat is
T69 7093-7097 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T70 7101-7113 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T71 7127-7130 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T72 7201-7202 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 7226-7228 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T74 7274-7279 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T75 7290-7291 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T76 7359-7364 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T77 7380-7384 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T78 7485-7486 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 7511-7516 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T80 7588-7593 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T81 7600-7601 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T82 7637-7642 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T83 7695-7697 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T84 8027-8032 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T85 8374-8378 http://purl.obolibrary.org/obo/CLO_0053001 denotes 1–14
T86 8410-8411 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 8476-8480 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T88 8942-8943 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 9000-9001 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T90 9264-9269 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T91 9264-9269 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T92 9374-9379 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T93 9374-9379 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T94 9388-9394 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T95 9388-9394 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T96 9388-9394 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T97 9388-9394 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T98 9407-9416 http://purl.obolibrary.org/obo/PR_000010213 denotes myoglobin
T99 9526-9537 http://purl.obolibrary.org/obo/CL_0000232 denotes erythrocyte
T100 9690-9695 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T101 9690-9695 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T102 9749-9755 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T103 9766-9769 http://purl.obolibrary.org/obo/PR_000001379 denotes IL2
T104 9857-9862 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T105 9913-9918 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T106 9950-9954 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T107 9950-9954 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T108 10201-10206 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T109 10225-10229 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T110 10225-10229 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T111 10259-10275 http://purl.obolibrary.org/obo/UBERON_0000175 denotes pleural effusion
T112 10453-10454 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T113 10464-10466 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T114 10617-10622 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T115 10758-10759 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T116 10935-10940 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T117 10935-10940 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T118 10935-10940 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T119 10935-10940 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T120 11212-11218 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T121 11212-11218 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T122 11212-11218 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T123 11212-11218 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T124 11225-11227 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T125 11298-11303 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T126 11401-11403 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T127 11918-11923 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T128 11918-11923 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T129 11918-11923 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T130 11918-11923 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T131 12171-12172 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 12404-12405 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T133 12427-12428 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T134 12449-12450 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T135 12464-12465 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T136 12539-12540 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T137 12816-12817 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T138 13229-13233 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T139 13276-13299 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T140 13460-13465 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T141 13552-13557 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T142 13617-13618 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T143 13662-13663 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T144 13766-13774 http://purl.obolibrary.org/obo/UBERON_0001637 denotes arterial
T145 13766-13774 http://www.ebi.ac.uk/efo/EFO_0000814 denotes arterial
T146 13909-13910 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T147 13978-13979 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T148 14024-14029 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T149 14102-14107 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T150 14162-14167 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T151 14175-14177 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T152 14515-14516 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T153 14923-14928 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T154 14923-14928 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T155 15002-15007 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T156 15002-15007 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T157 15080-15088 http://purl.obolibrary.org/obo/UBERON_0001637 denotes arterial
T158 15080-15088 http://www.ebi.ac.uk/efo/EFO_0000814 denotes arterial
T159 15089-15094 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T160 15089-15094 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T161 15134-15139 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T162 15337-15341 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T163 15981-15989 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively
T164 16091-16096 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T165 16311-16317 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T166 16456-16460 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T167 16456-16460 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T168 16601-16605 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T169 16601-16605 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T170 16703-16711 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T171 16957-16962 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T172 17010-17011 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T173 17024-17027 http://purl.obolibrary.org/obo/CLO_0001000 denotes 3–5
T174 17207-17208 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T175 17261-17263 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T176 17266-17267 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T177 17321-17322 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T178 17403-17411 http://purl.obolibrary.org/obo/OBI_0000245 denotes organize
T179 17403-17411 http://purl.obolibrary.org/obo/OBI_0100026 denotes organize
T180 17403-17411 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organize
T181 17565-17567 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T182 18658-18671 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizations
T183 18840-18853 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizations
T184 19071-19072 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T185 19201-19202 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T186 19320-19327 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T187 19334-19339 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T188 19374-19375 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T189 19495-19498 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T190 19499-19500 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T191 19659-19664 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T192 19659-19664 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T193 19659-19664 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T194 19659-19664 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T195 19824-19825 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T196 20140-20141 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T197 20371-20372 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T198 20433-20434 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T199 20599-20602 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T200 20669-20674 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T201 20699-20707 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human to
T202 20708-20713 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T203 20746-20749 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T204 20885-20890 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T205 21483-21488 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T206 21746-21748 http://purl.obolibrary.org/obo/CLO_0050050 denotes s1
T207 22891-22893 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T208 23172-23174 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T209 23250-23252 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T210 23459-23460 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T211 23468-23470 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T212 23574-23579 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T213 23706-23707 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T214 23818-23823 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T215 23818-23823 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T216 23818-23823 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T217 23818-23823 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T218 24336-24342 http://purl.obolibrary.org/obo/UBERON_0003100 denotes Female
T219 24348-24352 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T220 24348-24352 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T221 24380-24382 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T222 24519-24521 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T223 24589-24591 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T224 24748-24760 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T225 24837-24850 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizations
T226 24951-24963 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T227 25063-25073 http://purl.obolibrary.org/obo/BFO_0000030 denotes Objectives
T228 25337-25347 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T229 25348-25349 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T230 25591-25603 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T231 25794-25801 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1220-1224 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T2 1423-1428 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T3 7233-7240 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T4 7343-7351 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T5 7372-7379 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T6 7468-7475 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T7 7517-7528 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T8 7556-7565 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T9 7665-7672 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T10 7922-7927 Chemical denotes ether http://purl.obolibrary.org/obo/CHEBI_25698
T11 7933-7940 Chemical denotes ethanol http://purl.obolibrary.org/obo/CHEBI_16236
T12 7942-7950 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T14 7951-7963 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T15 7975-7979 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T16 7985-7995 Chemical denotes chloroform http://purl.obolibrary.org/obo/CHEBI_35255
T17 8042-8055 Chemical denotes chlorhexidine http://purl.obolibrary.org/obo/CHEBI_3614
T18 9407-9416 Chemical denotes myoglobin http://purl.obolibrary.org/obo/CHEBI_7044
T19 9508-9515 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T20 12651-12663 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T21 12659-12663 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T22 13690-13696 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T23 13795-13801 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T24 13846-13852 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T25 14759-14764 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T26 14881-14887 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T27 14964-14971 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T28 15176-15182 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T29 15210-15216 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T30 15244-15250 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T31 15314-15320 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T32 15436-15450 Chemical denotes antiviral drug http://purl.obolibrary.org/obo/CHEBI_36044
T33 15436-15445 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T34 15446-15450 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T35 15563-15572 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T36 15700-15711 Chemical denotes antibiotics http://purl.obolibrary.org/obo/CHEBI_33281
T37 15762-15773 Chemical denotes antibiotics http://purl.obolibrary.org/obo/CHEBI_33281
T38 16840-16845 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T39 16976-16991 Chemical denotes glucocorticoids http://purl.obolibrary.org/obo/CHEBI_24261
T40 17095-17113 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T41 18031-18044 Chemical denotes disinfectants http://purl.obolibrary.org/obo/CHEBI_48219
T42 20741-20745 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T43 20891-20899 Chemical denotes carriers http://purl.obolibrary.org/obo/CHEBI_78059
T44 21535-21540 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T45 22008-22014 Chemical denotes formal http://purl.obolibrary.org/obo/CHEBI_48341
T46 25367-25372 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1144-1156 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T2 4397-4403 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T3 8721-8732 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T4 13300-13309 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T5 15058-15069 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T6 16318-16328 http://purl.obolibrary.org/obo/GO_0046903 denotes secretions
T7 21463-21475 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-96 Sentence denotes Characteristics of and Public Health Responses to the Coronavirus Disease 2019 Outbreak in China
T2 98-106 Sentence denotes Abstract
T3 107-252 Sentence denotes In December 2019, cases of unidentified pneumonia with a history of exposure in the Huanan Seafood Market were reported in Wuhan, Hubei Province.
T4 253-336 Sentence denotes A novel coronavirus, SARS-CoV-2, was identified to be accountable for this disease.
T5 337-496 Sentence denotes Human-to-human transmission is confirmed, and this disease (named COVID-19 by World Health Organization (WHO)) spread rapidly around the country and the world.
T6 497-591 Sentence denotes As of 18 February 2020, the number of confirmed cases had reached 75,199 with 2009 fatalities.
T7 592-789 Sentence denotes The COVID-19 resulted in a much lower case-fatality rate (about 2.67%) among the confirmed cases, compared with Severe Acute Respiratory Syndrome (SARS) and Middle East Respiratory Syndrome (MERS).
T8 790-964 Sentence denotes Among the symptom composition of the 45 fatality cases collected from the released official reports, the top four are fever, cough, short of breath, and chest tightness/pain.
T9 965-1111 Sentence denotes The major comorbidities of the fatality cases include hypertension, diabetes, coronary heart disease, cerebral infarction, and chronic bronchitis.
T10 1112-1195 Sentence denotes The source of the virus and the pathogenesis of this disease are still unconfirmed.
T11 1196-1240 Sentence denotes No specific therapeutic drug has been found.
T12 1241-1348 Sentence denotes The Chinese Government has initiated a level-1 public health response to prevent the spread of the disease.
T13 1349-1504 Sentence denotes Meanwhile, it is also crucial to speed up the development of vaccines and drugs for treatment, which will enable us to defeat COVID-19 as soon as possible.
T14 1506-1508 Sentence denotes 1.
T15 1509-1521 Sentence denotes Introduction
T16 1522-1635 Sentence denotes In December 2019, a cluster of pneumonia of unknown etiology was detected in Wuhan City, Hubei Province of China.
T17 1636-1784 Sentence denotes The first 27 reported cases were all related to Huanan Seafood Wholesale Market, which sells aquatic products, live poultries, and wild animals [1].
T18 1785-2027 Sentence denotes The first batch of cases identified later showed no exposure or even no relation to Huanan Wholesale Market, and the human-to-human transmission was confirmed; moreover, nosocomial infections were reported in some health care workers [2,3,4].
T19 2028-2249 Sentence denotes The Chinese Center for Disease Control and Prevention (CDC) and Chinese health authorities later identified and announced that a new coronavirus (2019-nCoV) was accountable for the outbreak of this pneumonia in Wuhan [5].
T20 2250-2468 Sentence denotes Thereafter, this disease was named Coronavirus Disease 2019 (COVID-19) by World Health Organization (WHO), and the causative virus was designated as SARS-CoV-2 by the International Committee on Taxonomy of Viruses [6].
T21 2469-2718 Sentence denotes Within one and a half months, as of midnight of 18 February 2020, the novel coronavirus pneumonia (COVID-19) had spread from Hubei to 34 provinces in China and another 25 countries, resulting in 75,199 confirmed cases with 2009 deaths (Table 1) [7].
T22 2719-2848 Sentence denotes At present, the number of cases is increasing rapidly in China and even around the world, which is a big threat to public health.
T23 2849-2927 Sentence denotes Thirty-one provinces of China have initiated a level-1 public health response.
T24 2928-3160 Sentence denotes The aim of this article is to provide a timely review of the characteristics of the COVID-19 outbreak including the epidemiology, pathogenicity, clinical features, and measures of treatment, prevention, and control for this disease.
T25 3162-3164 Sentence denotes 2.
T26 3165-3193 Sentence denotes The Epidemiology of COVID-19
T27 3194-3411 Sentence denotes On 31 December 2019, Wuhan Municipal Health Commission reported a number of unknown pneumonia cases related to Huanan Seafood Wholesale Market, 27 cases were hospitalized, seven of which were in serious condition [1].
T28 3412-3653 Sentence denotes On 5 February 2020, Wuhan Municipal Health Committee reported that 59 cases of viral pneumonia with unknown etiology were detected in Wuhan, including seven severe cases, but no clear evidence was found for “human-to-human” transmission [8].
T29 3654-3837 Sentence denotes On Jan 11, Wuhan Municipal Health Committee issued a new report confirming that the pathogen of the viral pneumonia of unknown cause was initially determined as a new coronavirus [9].
T30 3838-3966 Sentence denotes On 20 February 2020, it was officially confirmed that “human-to-human” transmission and nosocomial infection had occurred [2,3].
T31 3967-4183 Sentence denotes Since 16 February 2020, the cumulative COVID-19 case number increased quickly; meanwhile, the daily emerging case number increased steadily to 3886 on 4 February 2020, and then fluctuated to 2015 on 11 February 2020.
T32 4184-4263 Sentence denotes The fatality cases number increased steadily to 2004 cases on 18 February 2020.
T33 4264-4384 Sentence denotes The cumulative and daily emerged cases number jumped to 59,804 and 15,152, respectively, on 12 February 2020 (Figure 1).
T34 4385-4659 Sentence denotes This fierce growth of cumulative and daily emerged cases number in one day is due to the improvement of diagnosis standard for confirmed cases in Hubei province, in which the suspected cases with pneumonia imaging characteristics are categorized as clinical diagnosis cases.
T35 4660-4737 Sentence denotes As a result, the patients can receive standard treatment as soon as possible.
T36 4738-4826 Sentence denotes All data are from the National Health Commission of the People’s Republic of China [10].
T37 4827-5105 Sentence denotes The COVID-19 resulted in much lower mortality (about 2.67% up-to-date) among the confirmed cases, compared with Severe Acute Respiratory Syndrome (SARS) at 9.60% (November 2002–July 2003) and Middle East Respiratory Syndrome (MERS) at 34.4% (April 2012–November 2019) (Table 1).
T38 5106-5216 Sentence denotes The median ages for the patients of COVID-19, SARS, and MERS are 55.5, 41.3, and 52.8 years old, respectively.
T39 5217-5397 Sentence denotes COVID-19 and MERS patients share similargender composition of females (32%) and males (67%), but SARS patients show almost the same proportion of males (46.9%) and females (53.1%).
T40 5398-5624 Sentence denotes According to the “Diagnosis &Treatment Scheme for Novel Corona Virus Pneumonia (Trial) 6th Edition”, the source of infection is majorly the COVID-19 patients, even the asymptomatic patients can also be the source of infection.
T41 5625-5701 Sentence denotes The transmission way is majorly through respiratory droplets and contacting.
T42 5702-5749 Sentence denotes People are generally susceptible to this virus.
T43 5751-5753 Sentence denotes 3.
T44 5754-5795 Sentence denotes Pathogenic Characteristics of Coronavirus
T45 5796-5948 Sentence denotes Coronavirus is a single strand positive RNA (+ssRNA) virus, belonging to order Nidovirales, family Coronaviridae, and subfamily Orthocoronavirinae [13].
T46 5949-6081 Sentence denotes According to the characteristics of serotype and genome, the coronavirus subfamily is divided into four genera: α, β, γ, and δ [14].
T47 6082-6360 Sentence denotes There are six kinds of coronaviruses known to infect humans, including 229E and NL63 of α genus [15,16], OC43, HKU1, Middle East respiratory syndrome-associated coronavirus (MERSr-CoV), and severe acute respiratory syndrome-associated coronavirus (SARSr-CoV) of β genus [16,17].
T48 6361-6555 Sentence denotes The coronavirus isolated from the lower respiratory tract of patients with unidentified pneumonia in Wuhan is a new type of coronavirus (SARS-CoV-2) belonging to genus β, and subgenus sarbe [5].
T49 6556-6679 Sentence denotes SARS-CoV-2 is different from the zoonotic MERSr-CoV and SARSr-CoV and becomes the seventh coronavirus to infect humans [5].
T50 6680-6947 Sentence denotes The phylogenetic analysis of the coronaviruses based on full-length genome sequences shows that SARS-CoV-2 has the smallest genetic distance from bat coronavirus, but only about 45%–90% similarity with SARSr-CoV, and a lower similarity of 20%–60% with MERSr-CoV [18].
T51 6948-7114 Sentence denotes Therefore, a bat is probably the original host of SARS-CoV-2, although the intermediate host may still exist in the process of transmission from bats to human beings.
T52 7115-7230 Sentence denotes Coronavirus has an envelope, the particles are round or oval, often pleomorphic, with a diameter of 50–200 nm [18].
T53 7231-7313 Sentence denotes S protein is located on the surface of the virus and forms a rod-shaped structure.
T54 7314-7425 Sentence denotes As one of the main antigenic proteins of the virus, the S protein gene is the main target used for typing [19].
T55 7426-7699 Sentence denotes Xu et al. also reported that SARS-CoV-2 S-protein supports a strong interaction with human angiotensin-converting enzyme 2 (ACE2) molecules, which means that the virus poses a significant public health risk for human transmission by the S-protein–ACE2 binding pathway [18].
T56 7700-7829 Sentence denotes The knowledge of the physical and chemical characteristics of coronaviruses mostly comes from the study of SARS-CoV and MERS-CoV.
T57 7830-7908 Sentence denotes The coronaviruses are sensitive to heat and can be killed at 56 °C for 30 min.
T58 7909-8061 Sentence denotes In addition, ether, 75% ethanol, chlorine disinfectant, peracetic acid, and chloroform can effectively inactivate the virus, but not chlorhexidine [20].
T59 8063-8065 Sentence denotes 4.
T60 8066-8102 Sentence denotes Clinical Characteristics of COVID-19
T61 8104-8108 Sentence denotes 4.1.
T62 8109-8132 Sentence denotes Clinical Manifestations
T63 8133-8389 Sentence denotes According to the “Diagnosis & Treatment Scheme for Novel Coronavirus Pneumonia (Trial) 6th Edition” enacted by the National Health Commission of the People’s Republic of China on 19 February 2020, the incubation time after exposure is about 1–14 days [20].
T64 8390-8450 Sentence denotes Fever, fatigue, and a dry cough are the main manifestations.
T65 8451-8528 Sentence denotes Nasal obstruction, runny nose, and other upper respiratory symptoms are rare.
T66 8529-8745 Sentence denotes About half of the patients developed dyspnea one week later, and severe cases developed rapidly into acute respiratory distress syndrome, septic shock, hard-to-correct metabolic acidosis, and coagulation dysfunction.
T67 8746-8835 Sentence denotes Severe and critical patients may present moderate to low fever, or even no obvious fever.
T68 8836-8922 Sentence denotes Some patients have mild onset symptoms, no fever, and mostly recovered after one week.
T69 8923-9040 Sentence denotes Most patients have a favorable prognosis, although some patients are left in a critical condition, or do not survive.
T70 9041-9117 Sentence denotes The aged patients and the patients with basic diseases have worse prognosis.
T71 9118-9153 Sentence denotes Children cases are relatively mild.
T72 9155-9159 Sentence denotes 4.2.
T73 9160-9182 Sentence denotes Laboratory Examination
T74 9183-9468 Sentence denotes In the early stages of the disease, the total number of leukocytes in peripheral blood is normal or decreased, the lymphocyte count is decreased, and some patients present elevated levels of liver enzyme, muscle enzyme, and myoglobin; some severe cases present elevated troponin level.
T75 9469-9589 Sentence denotes Most patients show elevated C-reactive protein (CRP) and erythrocyte sedimentation rate (ESR), and normal procalcitonin.
T76 9590-9712 Sentence denotes In severe cases, the patients present with increased D-dimer and progressively decreased peripheral blood lymphocyte [20].
T77 9713-9850 Sentence denotes Compared with non-ICU patients, the plasma levels of IL2, IL7, IL10, GSCF, IP10, MCP1, MIP1a, and TNF-α were higher in ICU patients [21].
T78 9852-9856 Sentence denotes 4.3.
T79 9857-9870 Sentence denotes Chest Imaging
T80 9871-9960 Sentence denotes All patients suffered from pneumonia, and chest CT scans showed shadows in the lung [20].
T81 9961-10112 Sentence denotes In the early stages of the disease, patients present with multiple small patch shadows and interstitial changes, especially in the extrapulmonary zone.
T82 10113-10207 Sentence denotes It further progresses to multiple ground glass shadows and infiltrative shadows in both lungs.
T83 10208-10289 Sentence denotes In severe cases, lung consolidation may occur, but pleural effusion is rare [20].
T84 10290-10452 Sentence denotes To provide more information about the disease for the treatment in clinics, we collected detailed information about the fatal cases released by official channels.
T85 10453-10757 Sentence denotes A total of 41 fatal cases were used to reveal the symptoms of the deaths, showing the symptom composition of fever (80.5%), cough (56.1%), short of breath (31.7%), chest tightness/pain (24.4%), fatigue (22.0%), dyspnea (12.2%), dizziness/headache (4.9%), general pain (7.3%) and chills (4.9%) (Figure 2).
T86 10758-11056 Sentence denotes A total of 26 cases with fatalities were used to disclose the dangerous comorbidities, showing that the major comorbidities are hypertension (53.8%), diabetes (42.3%), coronary heart disease (19.2%), cerebral infarction (15.4%), chronic bronchitis (19.2%) and Parkinson’s disease (7.7%) (Figure 2).
T87 11057-11364 Sentence denotes Chen N et al. reported that, among 99 confirmed cases, the common symptoms are fever (83%), cough (82%), bilateral pneumonia (75%), short of breath (31%), muscle ache (11%), confusion (9%), headache (8%), sore throat (5%), rhinorrhoea (4%), chest pain (2%), diarrhoea (2%), and nausea and vomiting (1%) [4].
T88 11365-11740 Sentence denotes Huang C et al. reported that, among 41 confirmed cases, the symptom composition is as follows: pneumonia (100%), fever (98%), cough (76%), lymphopenia (63%), Dyspnea (55%), fatigue (44%), sputum production (28%), headache (8%), hemoptysis (5%), and diarrhea (3%); and the underlying diseases included diabetes (20%), hypertension (15%), and cardiovascular disease (15%) [21].
T89 11741-12005 Sentence denotes Though the symptom compositions reported for the confirmed cases are similar to that of the fatality cases we collected, the percentages of hypertension, diabetes, and coronary heart diseases are much higher among the fatality cases than among the confirmed cases.
T90 12006-12117 Sentence denotes This may indicate that the comorbidities probably are important factors resulted in death of COVID-19 patients.
T91 12119-12121 Sentence denotes 5.
T92 12122-12143 Sentence denotes Diagnosis of COVID-19
T93 12144-12347 Sentence denotes The diagnosis was based on a set of clinical criteria recommended by the National Health Commission of the People’s Republic of China and the National Administration of Traditional Chinese Medicine [20].
T94 12349-12353 Sentence denotes 5.1.
T95 12354-12369 Sentence denotes Suspected Cases
T96 12370-12843 Sentence denotes The cases comply with any item of A and any two items of B, or with 3 items of B as follows. (A) Epidemiological history: within two weeks before disease onset, 1. have a history of travel or residence in the district with case report; 2. have contacted the patients positive with nucleic acid detection; 3. have contacted with the patients with fever and respiratory symptoms from the district with case report; 4. disease onset in clustering. (B) Clinical manifestations:
T97 12844-12846 Sentence denotes 1.
T98 12847-12895 Sentence denotes Have fever and/or respiratory tract symptoms; 2.
T99 12896-12957 Sentence denotes Have pneumonia with image characteristics mentioned above; 3.
T100 12958-13072 Sentence denotes In early stage of the disease, have normal or decreased total number of leukocytes, or decreased lymphocyte count.
T101 13074-13078 Sentence denotes 5.2.
T102 13079-13094 Sentence denotes Confirmed Cases
T103 13095-13352 Sentence denotes The unconfirmed cases met the criteria of the suspected cases and are identified positive with SARS-CoV-2 RNA, by real-time RT-PCR or gene sequencing, from the sputum, throat swab, lower respiratory tract secretion, or other samples collected from patients.
T104 13354-13358 Sentence denotes 5.3.
T105 13359-13397 Sentence denotes Clinical Typing of the Confirmed Cases
T106 13398-13472 Sentence denotes Mild cases: have mild symptoms, no pneumonia manifestation in chest image;
T107 13473-13564 Sentence denotes Common cases: have fever, respiratory symptoms, and pneumonia manifestation in chest image;
T108 13565-13854 Sentence denotes Severe cases: comply with any item of the follows. (A) dyspnea, respiratory rate ≥30 times/min; (B) at resting state, finger oxygen saturation ≤ 93%; (C) PaO2/FiO2 ≤ 300 mmHg (1mmHg = 0.133 kPa, PaO2: arterial partial pressure of oxygen, FiO2: fractional concentration of inspired oxygen);
T109 13855-14256 Sentence denotes Critical cases: comply with any item of the follows. (A) show respiratory failure and mechanical ventilation is required; (B) present with shock; (C) combine with other organ failure needing Intensive Care Unit (ICU) monitoring and treatment; (D) chest imaging shows multilobe lesions or progress of lesion focus within 48 h ≥ 50%; (E) combine with other clinical conditions requiring hospitalization.
T110 14258-14260 Sentence denotes 6.
T111 14261-14282 Sentence denotes Treatment of COVID-19
T112 14284-14288 Sentence denotes 6.1.
T113 14289-14346 Sentence denotes Treatment Area Decision According to the Disease Severity
T114 14347-14472 Sentence denotes Suspected and confirmed cases should be treated in isolation in hospitals with effective isolation and protective conditions.
T115 14473-14587 Sentence denotes The suspected cases should be isolated in a single room, and the confirmed cases can be accepted in the same room.
T116 14588-14648 Sentence denotes Critical cases should be treated in ICU as soon as possible.
T117 14650-14654 Sentence denotes 6.2.
T118 14655-14672 Sentence denotes General Treatment
T119 14673-14910 Sentence denotes Bed rest, strengthen supportive treatment, ensure sufficient energy; pay attention to water-electrolytes balance and maintain the stability of the internal environment; closely monitor vital signs and finger oxygen saturation, and so on.
T120 14911-15148 Sentence denotes Monitor the blood routine, urine routine, C-reactive protein (CRP) and health indications (liver enzyme, myocardial enzyme, renal function, etc.), coagulation function, arterial blood gas analysis if necessary, and recheck chest imaging.
T121 15149-15283 Sentence denotes According to the change of oxygen saturation, give effective oxygen therapy in time, including oxygen given by nasal catheter or mask.
T122 15284-15401 Sentence denotes If necessary, apply high flow oxygen therapy via the nose, noninvasive or invasive mechanical ventilation, and so on.
T123 15402-15462 Sentence denotes Antiviral treatment: no effective antiviral drug at present.
T124 15463-15645 Sentence denotes Treat with IFN-α aerosol inhalation (five million U per time for adults, two times per day), and/or Lopinavir/Ritonavir oral administration (two tablets per time, two times per day).
T125 15646-15774 Sentence denotes Antibiotic treatment: avoid blind and improper use of antibiotics, especially the combination use of broad-spectrum antibiotics.
T126 15775-15813 Sentence denotes Strengthen bacteriological monitoring.
T127 15814-15882 Sentence denotes Antibiotics should be used in time in secondary bacterial infection.
T128 15884-15888 Sentence denotes 6.3.
T129 15889-15927 Sentence denotes Treatment of Severe and Critical Cases
T130 15928-16114 Sentence denotes Treatment principle: based on symptomatic treatment, actively prevent and treat complications, treat basic diseases, prevent secondary infection, and timely apply organ function support.
T131 16115-16450 Sentence denotes Respiratory support: apply noninvasive mechanical ventilation for two hours, if the condition is not improved, or the patient is intolerable to noninvasive ventilation, accompanied with increased airway secretions, severe coughing, or unstable hemodynamics, the patient should be transferred to invasive mechanical ventilation in time.
T132 16451-16613 Sentence denotes The “lung-protective ventilation strategy” with low tidal volume should be adopted in invasive mechanical ventilation to reduce ventilator-associated lung injury.
T133 16614-16743 Sentence denotes If necessary, ventilation in the prone position, recruitment maneuver, or extracorporeal membrane oxygenation (ECMO) can be used.
T134 16744-16893 Sentence denotes Circulation support: improve microcirculation based on full fluid resuscitation, use vasoactive drugs, and apply hemodynamic monitoring if necessary.
T135 16894-17128 Sentence denotes Others: according to the degree of dyspnea and the progress of chest imaging, use glucocorticoids appropriately for a short time (3–5 days) with the recommended dose no more than what is equivalent to methylprednisolone 1–2 mg/kg·day.
T136 17130-17132 Sentence denotes 7.
T137 17133-17155 Sentence denotes Prevention and Control
T138 17156-17265 Sentence denotes As of 26 January 2020, 30 provinces have initiated a level-1 public health response to control COVID-19 [22].
T139 17266-17569 Sentence denotes A level-1 response means that during the occurrence of a particularly serious public health emergency, the provincial headquarters shall organize and coordinate the emergency response work within its administrative area according to the decision deployment and unified command of the State Council [22].
T140 17570-17792 Sentence denotes Fever observation rooms shall be set up at stations, airports, ports, and so on to detect the body temperature of passengers entering and leaving the area and implement observation/registration for the suspicious patients.
T141 17793-17976 Sentence denotes The government under its jurisdiction shall, in accordance with the law, take compulsory measures to restrict all kinds of the congregation, and ensure the supply of living resources.
T142 17977-18124 Sentence denotes They will also ensure the sufficient supply of masks, disinfectants, and other protective articles on the market, and standardize the market order.
T143 18125-18262 Sentence denotes The strengthening of public health surveillance, hygiene knowledge publicity, and monitoring of public places and key groups is required.
T144 18263-18483 Sentence denotes Comprehensive medical institutions and some specialized hospitals should be prepared to accept COVID-19 patients to ensure that severe and critical cases can be differentiated, diagnosed, and effectively treated in time.
T145 18484-18811 Sentence denotes The health administration departments, public health departments, and medical institutions at all (province, city, county, district, township, and street) levels, and social organizations shall function in epidemic prevention and control and provide guidance for patients and close contact families for disease prevention [23].
T146 18812-18875 Sentence denotes The responsibilities of the organizations are shown in Table 2.
T147 18876-19111 Sentence denotes In accordance with the working principle of “prevention first, prevention and control combined, scientific guidance and timely treatment”, the prevention and control work shall be carried out in a coordinated and standardized way [23].
T148 19113-19115 Sentence denotes 8.
T149 19116-19126 Sentence denotes Discussion
T150 19127-19328 Sentence denotes The recent outbreak of the unknown severe pneumonia in China is caused by a novel coronavirus named 2019-nCoV [2], later was designated SARS-CoV-2 by the International Committee on Taxonomy of Viruses.
T151 19329-19396 Sentence denotes This virus and the SARSr-CoV/MERSr-CoV share a common ancestor [2].
T152 19397-19530 Sentence denotes Compared with SARSr-CoV and MERSr-CoV, SARS-CoV-2 results in much lower mortality in patients but has a comparable infection ability.
T153 19531-19776 Sentence denotes From the analysis of the fatal cases of this novel coronavirus pneumonia, the comorbidities of hypertension, diabetes, coronary heart disease, cerebral infarction, and chronic bronchitis were found to be dangerous factors that resulted in death.
T154 19777-19901 Sentence denotes In 2002 and 2003, the outbreak of SARS brought a disaster to the people of the world, especially the Chinese people [24,25].
T155 19902-20075 Sentence denotes Fortunately, SARS was finally defeated, and Chinese health departments upgraded their disease prevention and control system by summing up their experiences of fighting SARS.
T156 20076-20195 Sentence denotes Thus, when COVID-19 appeared, the whole country quickly entered a state of fighting against the new infectious disease.
T157 20196-20379 Sentence denotes Policies led by the National Health Commission have been formulated and implemented efficiently, and Chinese scientists identified the etiology of the disease in no more than a month.
T158 20380-20496 Sentence denotes However, new cases are increasing every day, showing a trend of spreading to the whole country and across the world.
T159 20497-20663 Sentence denotes COVID-19 appeared just one month before the Spring Festival of China, and the massive population flow has brought great challenges for disease prevention and control.
T160 20664-20761 Sentence denotes This virus can be transmitted from human to human and no effective treatment drug has been found.
T161 20762-20985 Sentence denotes The most effective prevention and control measures are to find suspected patients and close contacts, confirm patients and virus carriers, and block the transmission through isolation, disinfection, and personal protection.
T162 20986-21137 Sentence denotes Therefore, early detection, isolation, and treatment of patients are the key measures to control the source of infection and reduce the infection rate.
T163 21138-21249 Sentence denotes It is also crucial to avoid nosocomial infection by strengthening the management of medical staff and patients.
T164 21250-21333 Sentence denotes Health education on knowledge for disease prevention and control is also important.
T165 21334-21561 Sentence denotes Finally, if we want to eliminate the threat of this novel coronavirus pneumonia similar to SARS, we need to learn more about the pathogenesis of the virus and develop specific vaccines and therapeutic drugs as soon as possible.
T166 21563-21578 Sentence denotes Acknowledgments
T167 21579-21643 Sentence denotes The authors thank Zhi-Yi Zhong for her support in data analysis.
T168 21645-21668 Sentence denotes Supplementary Materials
T169 21669-21843 Sentence denotes The following are available online at https://www.mdpi.com/2077-0383/9/2/575/s1, Supplementary Data 1, The case information is from the reports released by official channels.
T170 21844-21880 Sentence denotes Click here for additional data file.
T171 21882-21902 Sentence denotes Author Contributions
T172 21903-22237 Sentence denotes Conceptualization, H.-J.P. and S.-Q.D.; methodology, H.-J.P. and S.-Q.D.; software, H.-J.P. and S.-Q.D.; formal analysis, H.-J.P. and S.-Q.D.; investigation, H.-J.P. and S.-Q.D.; data check, H.-J.P. and S.-Q.D.; writing—original draft preparation, H.-J.P. and S.-Q.D.; writing—review and editing, H.-J.P.; funding acquisition, H.-J.P.
T173 22238-22314 Sentence denotes All authors have read and agreed to the published version of the manuscript.
T174 22316-22323 Sentence denotes Funding
T175 22324-22679 Sentence denotes This research was funded by National Natural Science Foundation of China (81572012, 81772217, 20180907, 81971954), Guangdong Provincial Natural Science Foundation Project (2016A030311025, 2017A030313694), Science and Technology Planning Project of Guangdong Province (2018A050506038), and Key project of Guangzhou science research (201904020011) to H.J.P.
T176 22681-22702 Sentence denotes Conflicts of Interest
T177 22703-22748 Sentence denotes The authors declare no conflicts of interest.
T178 22750-22884 Sentence denotes Figure 1 Daily cumulative/emerged number of confirmed cases and fatal cases of Coronavirus Disease 2019 (COVID-19) in Mainland China.
T179 22885-22994 Sentence denotes As of 18 February 2020, the total number of confirmed cases and deaths reached 74,185 and 2004, respectively.
T180 22995-23267 Sentence denotes Since 16 February 2020, the total number of confirmed cases increased quickly; the daily emerging cases increased steadily to 3886 on February 4, and then fluctuated to 2015 on 11 February 2020; the fatality cases number increased slowly to 2004 cases on 18 February 2020.
T181 23268-23377 Sentence denotes The cumulative and daily emerged cases number jumped to 59,804 and 15,152, respectively, on 12 February 2020.
T182 23378-23929 Sentence denotes Figure 2 Clinical symptoms and comorbidities of the patients died of COVID-19. (A) Among 41 cases with fatalities, the symptoms include fever (80.5%), cough (56.1%), shortness of breath (31.7%), chest tightness/pain (24.4%), fatigue (22.0%), dyspnea (12.2%), dizziness/headache (4.9%), general pain (7.3%), and chills (4.9%). (B) Among 26 cases with fatalities, the major comorbidities are hypertension (53.8%), diabetes (42.3%), coronary heart disease (19.2%), cerebral infarction (15.4%), chronic bronchitis (19.2%), and Parkinson’s disease (7.7%).
T183 23930-24107 Sentence denotes The case information is from reports released by different provincial Health Commissions, including the National Health Commission (the links are shown in Supplementary Data 1).
T184 24108-24179 Sentence denotes Table 1 The key information about the coronavirus infection outbreaks.
T185 24180-24335 Sentence denotes Coronavirus Infection Outbreak Total Confirm Cases Median Age (Years Old) Number of Deaths Case-Fatality Rate (%) Countries Reported Cases References
T186 24336-24356 Sentence denotes Female (%) Male (%)
T187 24357-24444 Sentence denotes COVID-19(November 2019–18 February 2020) 75,199 55.5 * 2009 2.6711.0 * 26 [10][4]
T188 24445-24455 Sentence denotes 32 * 67 *
T189 24456-24522 Sentence denotes SARS(November 2002–July 2003) 8098 41.3 774 9.60 26 WHO [11]
T190 24523-24533 Sentence denotes 53.1 46.9
T191 24534-24601 Sentence denotes MERS(April 2012–November 2019) 2494 52.8 858 34.4 27 WHO [12]
T192 24602-24612 Sentence denotes 26.3 73.7
T193 24613-24695 Sentence denotes COVID-19: coronavirus disease 2019; SARS: severe acute respiratory syndrome; MERS:
T194 24696-24792 Sentence denotes Middle East respiratory syndrome; WHO, World Health Organization. * Data are from reference [4].
T195 24793-24950 Sentence denotes Table 2 Responsibilities for the different organizations at all (province, city, county, district, township, and street) levels in the outbreak of COVID-19.
T196 24951-25062 Sentence denotes Organization at all Levels Health Administration Department Center for Diseases Control Medical Institutions
T197 25063-25280 Sentence denotes Objectives To timely find and report the COVID-19 cases, understand the disease characteristics and possible sources of infection, standardize the management of close contacts, and prevent the spread of the epidemic.
T198 25281-25589 Sentence denotes Responsibilities Overall guidance of epidemic control, organizing a technical expert group for prevention and control; formulation and improvement of relevant work and technical schemes, and implementation of funds and materials for disease prevention and control; tracking and management of close contacts.
T199 25591-25949 Sentence denotes Organization, coordination, supervision, and evaluation of the monitoring work; collection, analysis, report, and feedback of the monitoring data; epidemiological investigation; strengthening laboratory testing ability, bio-safety protection awareness, and technical training; carrying out health education and publicity and risk communication to the public.
T200 25951-26170 Sentence denotes Case detection and report, isolation, diagnosis, and treatment; clinical management and prevention and control of nosocomial infections; sample collection and detection, and training of medical staff in the institution.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 147-156 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 908-913 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 915-920 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T4 922-937 Phenotype denotes short of breath http://purl.obolibrary.org/obo/HP_0002098
T5 943-958 Phenotype denotes chest tightness http://purl.obolibrary.org/obo/HP_0031352
T6 959-963 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T7 1019-1031 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T8 1092-1110 Phenotype denotes chronic bronchitis http://purl.obolibrary.org/obo/HP_0004469
T9 1553-1562 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T10 2226-2235 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 2557-2566 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T12 3278-3287 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T13 3497-3506 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T14 3760-3769 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T15 4581-4590 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T16 5467-5476 Phenotype denotes Pneumonia http://purl.obolibrary.org/obo/HP_0002090
T17 6449-6458 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T18 8202-8211 Phenotype denotes Pneumonia http://purl.obolibrary.org/obo/HP_0002090
T19 8390-8395 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T20 8397-8404 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T21 8412-8421 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T22 8451-8468 Phenotype denotes Nasal obstruction http://purl.obolibrary.org/obo/HP_0001742
T23 8470-8480 Phenotype denotes runny nose http://purl.obolibrary.org/obo/HP_0031417
T24 8566-8573 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T25 8636-8656 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T26 8674-8679 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273
T27 8697-8715 Phenotype denotes metabolic acidosis http://purl.obolibrary.org/obo/HP_0001942
T28 8803-8808 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T29 8829-8834 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T30 8879-8884 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T31 9898-9907 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T32 10259-10275 Phenotype denotes pleural effusion http://purl.obolibrary.org/obo/HP_0002202
T33 10562-10567 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T34 10577-10582 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T35 10592-10607 Phenotype denotes short of breath http://purl.obolibrary.org/obo/HP_0002098
T36 10617-10632 Phenotype denotes chest tightness http://purl.obolibrary.org/obo/HP_0031352
T37 10633-10637 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T38 10647-10654 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T39 10664-10671 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T40 10681-10690 Phenotype denotes dizziness http://purl.obolibrary.org/obo/HP_0002321
T41 10691-10699 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T42 10716-10720 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T43 10732-10738 Phenotype denotes chills http://purl.obolibrary.org/obo/HP_0025143
T44 10886-10898 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T45 10987-11005 Phenotype denotes chronic bronchitis http://purl.obolibrary.org/obo/HP_0004469
T46 11136-11141 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T47 11149-11154 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T48 11172-11181 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T49 11189-11204 Phenotype denotes short of breath http://purl.obolibrary.org/obo/HP_0002098
T50 11212-11223 Phenotype denotes muscle ache http://purl.obolibrary.org/obo/HP_0003326
T51 11247-11255 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T52 11262-11273 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T53 11298-11308 Phenotype denotes chest pain http://purl.obolibrary.org/obo/HP_0100749
T54 11315-11324 Phenotype denotes diarrhoea http://purl.obolibrary.org/obo/HP_0002014
T55 11335-11354 Phenotype denotes nausea and vomiting http://purl.obolibrary.org/obo/HP_0002017
T56 11460-11469 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T57 11478-11483 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T58 11491-11496 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T59 11504-11515 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T60 11523-11530 Phenotype denotes Dyspnea http://purl.obolibrary.org/obo/HP_0002094
T61 11538-11545 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T62 11578-11586 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T63 11593-11603 Phenotype denotes hemoptysis http://purl.obolibrary.org/obo/HP_0002105
T64 11614-11622 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T65 11682-11694 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T66 11706-11728 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T67 11881-11893 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T68 12716-12721 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T69 12852-12857 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T70 12901-12910 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T71 13433-13442 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T72 13492-13497 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T73 13525-13534 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T74 13620-13627 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T75 13917-13936 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T76 13994-13999 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273
T77 16337-16345 Phenotype denotes coughing http://purl.obolibrary.org/obo/HP_0012735
T78 16929-16936 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T79 17570-17575 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T80 19169-19178 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T81 19594-19603 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T82 19626-19638 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T83 19699-19717 Phenotype denotes chronic bronchitis http://purl.obolibrary.org/obo/HP_0004469
T84 21404-21413 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T85 23515-23520 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T86 23530-23535 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T87 23545-23564 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T88 23574-23589 Phenotype denotes chest tightness http://purl.obolibrary.org/obo/HP_0031352
T89 23590-23594 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T90 23604-23611 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T91 23621-23628 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T92 23638-23647 Phenotype denotes dizziness http://purl.obolibrary.org/obo/HP_0002321
T93 23648-23656 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T94 23673-23677 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T95 23690-23696 Phenotype denotes chills http://purl.obolibrary.org/obo/HP_0025143
T96 23769-23781 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T97 23870-23888 Phenotype denotes chronic bronchitis http://purl.obolibrary.org/obo/HP_0004469

2_test

Id Subject Object Predicate Lexical cue
32093211-31986261-57901183 2022-2023 31986261 denotes 3
32093211-32007143-57901184 2024-2025 32007143 denotes 4
32093211-31986261-57901185 3963-3964 31986261 denotes 3
32093211-30531947-57901186 5944-5946 30531947 denotes 13
32093211-30791586-57901187 6077-6079 30791586 denotes 14
32093211-9367365-57901188 6179-6181 9367365 denotes 15
32093211-17631932-57901189 6182-6184 17631932 denotes 16
32093211-17631932-57901190 6353-6355 17631932 denotes 16
32093211-30679277-57901191 6356-6358 30679277 denotes 17
32093211-32009228-57901192 6943-6945 32009228 denotes 18
32093211-32009228-57901193 7226-7228 32009228 denotes 18
32093211-18798692-57901194 7421-7423 18798692 denotes 19
32093211-32009228-57901195 7695-7697 32009228 denotes 18
32093211-31986264-57901196 9846-9848 31986264 denotes 21
32093211-32007143-57901197 11361-11362 32007143 denotes 4
32093211-31986264-57901198 11736-11738 31986264 denotes 21
32093211-14585636-57901199 19894-19896 14585636 denotes 24
32093211-12690091-57901200 19897-19899 12690091 denotes 25