PMC:7074424 / 3868-4438
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 103 | 364-384 | Gene | denotes | nucleocapsid protein | Gene:918763 |
| 107 | 298-301 | Species | denotes | CoV | Tax:11118 |
| 108 | 343-346 | Species | denotes | CoV | Tax:11118 |
| 114 | 484-492 | Species | denotes | SARS-CoV | Tax:694009 |
| 116 | 526-535 | Disease | denotes | infection | MESH:D007239 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32201449-25105276-47216992 | 207-208 | 25105276 | denotes | 9 |
| 32201449-27578435-47216993 | 321-323 | 27578435 | denotes | 10 |
| 32201449-17825937-47216994 | 420-422 | 17825937 | denotes | 11 |
| T91638 | 207-208 | 25105276 | denotes | 9 |
| T90677 | 321-323 | 27578435 | denotes | 10 |
| T77104 | 420-422 | 17825937 | denotes | 11 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T81 | 21-28 | GO:1990391 | denotes | complex |
| T80 | 44-50 | SO:0001026 | denotes | genome |
| T79 | 63-68 | NCBITaxon:10239 | denotes | virus |
| T78 | 139-147 | GO:0031975 | denotes | envelope |
| T77 | 149-157 | GO:0016020 | denotes | membrane |
| T76 | 264-273 | GO:0010467 | denotes | expressed |
| T75 | 333-339 | SO:0001026 | denotes | genome |
| T74 | 364-384 | PG_4 | denotes | nucleocapsid protein |
| T73 | 410-418 | GO:0031975 | denotes | envelope |
| T273 | 484-492 | SP_10 | denotes | SARS-CoV |
| T272 | 537-548 | UBERON:0001004 | denotes | respiratory |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T30 | 44-50 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T31 | 81-85 | Body_part | denotes | mRNA | http://purl.org/sig/ont/fma/fma67122 |
| T32 | 116-124 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T33 | 197-205 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T34 | 247-254 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T35 | 312-319 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T36 | 329-332 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T37 | 333-339 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T38 | 377-384 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T17 | 484-492 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T18 | 484-488 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T19 | 526-535 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 63-68 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T28 | 149-157 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T29 | 420-422 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T26 | 116-124 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T27 | 197-205 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T28 | 247-254 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T29 | 312-319 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T30 | 377-384 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 7-20 | http://purl.obolibrary.org/obo/GO_0003968 | denotes | transcriptase |
| T5 | 7-20 | http://purl.obolibrary.org/obo/GO_0003899 | denotes | transcriptase |
| T6 | 549-559 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretions |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 30-423 | Sentence | denotes | The remaining genome part of the virus encodes the mRNA which produces the structural proteins, i.e., spike, envelope, membrane, and nucleocapsid, and other accessory proteins.[9] Another important envelop-associated protein which is expressed by only some strains of CoV is the HE protein.[10] The RNA genome of CoV is packed in the nucleocapsid protein and further covered with envelope.[11] |
| T19 | 425-472 | Sentence | denotes | Molecular Basics of Transmission of Coronavirus |