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PMC:7073332 / 42986-43918 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T209 867-871 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T303 68-73 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T304 804-808 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T305 867-871 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T262 0-932 Sentence denotes The network proximity was converted to Z-score based on permutation tests:2 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$Z_{d_{CT}} = \frac{{d_{CT} - \overline {d_r} }}{{\sigma _r}},$$\end{document}ZdCT=dCT−dr¯σr,where \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\overline {d_r}$$\end{document}dr¯ and σr were the mean and standard deviation of the permutation test repeated 1000 times, each time with two randomly selected gene lists with similar degree distributions to those of C and T.