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PMC:7073332 / 2055-3620 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
104 0-13 Species denotes Coronaviruses Tax:11118
105 15-19 Species denotes CoVs Tax:11118
106 82-88 Species denotes humans Tax:9606
107 195-200 Species denotes human Tax:9606
108 201-205 Species denotes CoVs Tax:11118
109 225-270 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
110 272-280 Species denotes SARS-CoV Tax:694009
111 286-341 Species denotes Middle East respiratory syndrome coronavirus (MERS-CoV) Tax:1335626
112 505-513 Species denotes SARS-CoV Tax:694009
113 667-675 Species denotes MERS-CoV Tax:1335626
114 818-840 Species denotes 2019 novel coronavirus Tax:2697049
115 842-851 Species denotes 2019-nCoV Tax:2697049
116 852-862 Species denotes SARS-CoV-2 Tax:2697049
117 1049-1058 Species denotes 2019-nCoV Tax:2697049
118 1059-1069 Species denotes SARS-CoV-2 Tax:2697049
119 1103-1108 Species denotes human Tax:9606
120 1112-1117 Species denotes human Tax:9606
121 1229-1238 Species denotes 2019-nCoV Tax:2697049
122 1239-1249 Species denotes SARS-CoV-2 Tax:2697049
123 1370-1379 Species denotes 2019-nCoV Tax:2697049
124 1380-1390 Species denotes SARS-CoV-2 Tax:2697049
125 1535-1544 Species denotes 2019-nCoV Tax:2697049
126 1545-1555 Species denotes SARS-CoV-2 Tax:2697049
127 42-53 Species denotes respiratory Tax:12814
128 806-810 Species denotes HCoV Tax:694448
129 117-145 Disease denotes respiratory tract infections MESH:D012141
130 429-438 Disease denotes mortality MESH:D003643
131 476-484 Disease denotes infected MESH:D007239
132 728-734 Disease denotes deaths MESH:D003643
133 881-905 Disease denotes coronavirus disease 2019 MESH:C000657245
134 922-930 Disease denotes COVID-19 MESH:C000657245
135 1034-1040 Disease denotes deaths MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T10 42-59 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T11 117-134 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 42-59 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T2 117-134 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T11 225-258 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T12 272-280 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T13 505-513 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 852-860 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T15 881-905 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T16 922-930 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 1059-1067 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 1239-1247 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 1380-1388 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 1545-1553 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T8 82-88 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T9 195-200 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T10 357-363 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T11 626-638 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 676-679 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T13 684-685 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 1103-1108 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T15 1112-1117 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T16 1131-1134 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T13 0-147 Sentence denotes Coronaviruses (CoVs) typically affect the respiratory tract of mammals, including humans, and lead to mild to severe respiratory tract infections1.
T14 148-440 Sentence denotes In the past two decades, two highly pathogenic human CoVs (HCoVs), including severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), emerging from animal reservoirs, have led to global epidemics with high morbidity and mortality2.
T15 441-595 Sentence denotes For example, 8098 individuals were infected and 774 died in the SARS-CoV pandemic, which cost the global economy with an estimated $30 to $100 billion3,4.
T16 596-766 Sentence denotes According to the World Health Organization (WHO), as of November 2019, MERS-CoV has had a total of 2494 diagnosed cases causing 858 deaths, the majority in Saudi Arabia2.
T17 767-960 Sentence denotes In December 2019, the third pathogenic HCoV, named 2019 novel coronavirus (2019-nCoV/SARS-CoV-2), as the cause of coronavirus disease 2019 (abbreviated as COVID-19)5, was found in Wuhan, China.
T18 961-1166 Sentence denotes As of 24 February 2020, there have been over 79,000 cases with over 2600 deaths for the 2019-nCoV/SARS-CoV-2 outbreak worldwide; furthermore, human-to-human transmission has occurred among close contacts6.
T19 1167-1250 Sentence denotes However, there are currently no effective medications against 2019-nCoV/SARS-CoV-2.
T20 1251-1437 Sentence denotes Several national and international research groups are working on the development of vaccines to prevent and treat the 2019-nCoV/SARS-CoV-2, but effective vaccines are not available yet.
T21 1438-1565 Sentence denotes There is an urgent need for the development of effective prevention and treatment strategies for 2019-nCoV/SARS-CoV-2 outbreak.

2_test

Id Subject Object Predicate Lexical cue
32194980-26868298-19614142 145-146 26868298 denotes 1
32194980-27344959-19614143 591-592 27344959 denotes 3
32194980-28643204-19614144 593-594 28643204 denotes 4
32194980-32007143-19614145 931-932 32007143 denotes 5