PMC:7073332 / 2055-3620
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
104 | 0-13 | Species | denotes | Coronaviruses | Tax:11118 |
105 | 15-19 | Species | denotes | CoVs | Tax:11118 |
106 | 82-88 | Species | denotes | humans | Tax:9606 |
107 | 195-200 | Species | denotes | human | Tax:9606 |
108 | 201-205 | Species | denotes | CoVs | Tax:11118 |
109 | 225-270 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
110 | 272-280 | Species | denotes | SARS-CoV | Tax:694009 |
111 | 286-341 | Species | denotes | Middle East respiratory syndrome coronavirus (MERS-CoV) | Tax:1335626 |
112 | 505-513 | Species | denotes | SARS-CoV | Tax:694009 |
113 | 667-675 | Species | denotes | MERS-CoV | Tax:1335626 |
114 | 818-840 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |
115 | 842-851 | Species | denotes | 2019-nCoV | Tax:2697049 |
116 | 852-862 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
117 | 1049-1058 | Species | denotes | 2019-nCoV | Tax:2697049 |
118 | 1059-1069 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
119 | 1103-1108 | Species | denotes | human | Tax:9606 |
120 | 1112-1117 | Species | denotes | human | Tax:9606 |
121 | 1229-1238 | Species | denotes | 2019-nCoV | Tax:2697049 |
122 | 1239-1249 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
123 | 1370-1379 | Species | denotes | 2019-nCoV | Tax:2697049 |
124 | 1380-1390 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
125 | 1535-1544 | Species | denotes | 2019-nCoV | Tax:2697049 |
126 | 1545-1555 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
127 | 42-53 | Species | denotes | respiratory | Tax:12814 |
128 | 806-810 | Species | denotes | HCoV | Tax:694448 |
129 | 117-145 | Disease | denotes | respiratory tract infections | MESH:D012141 |
130 | 429-438 | Disease | denotes | mortality | MESH:D003643 |
131 | 476-484 | Disease | denotes | infected | MESH:D007239 |
132 | 728-734 | Disease | denotes | deaths | MESH:D003643 |
133 | 881-905 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
134 | 922-930 | Disease | denotes | COVID-19 | MESH:C000657245 |
135 | 1034-1040 | Disease | denotes | deaths | MESH:D003643 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T10 | 42-59 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
T11 | 117-134 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 42-59 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
T2 | 117-134 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T11 | 225-258 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T12 | 272-280 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T13 | 505-513 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T14 | 852-860 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T15 | 881-905 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T16 | 922-930 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T17 | 1059-1067 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T18 | 1239-1247 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T19 | 1380-1388 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T20 | 1545-1553 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8 | 82-88 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T9 | 195-200 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T10 | 357-363 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
T11 | 626-638 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | Organization |
T12 | 676-679 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T13 | 684-685 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T14 | 1103-1108 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T15 | 1112-1117 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T16 | 1131-1134 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13 | 0-147 | Sentence | denotes | Coronaviruses (CoVs) typically affect the respiratory tract of mammals, including humans, and lead to mild to severe respiratory tract infections1. |
T14 | 148-440 | Sentence | denotes | In the past two decades, two highly pathogenic human CoVs (HCoVs), including severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), emerging from animal reservoirs, have led to global epidemics with high morbidity and mortality2. |
T15 | 441-595 | Sentence | denotes | For example, 8098 individuals were infected and 774 died in the SARS-CoV pandemic, which cost the global economy with an estimated $30 to $100 billion3,4. |
T16 | 596-766 | Sentence | denotes | According to the World Health Organization (WHO), as of November 2019, MERS-CoV has had a total of 2494 diagnosed cases causing 858 deaths, the majority in Saudi Arabia2. |
T17 | 767-960 | Sentence | denotes | In December 2019, the third pathogenic HCoV, named 2019 novel coronavirus (2019-nCoV/SARS-CoV-2), as the cause of coronavirus disease 2019 (abbreviated as COVID-19)5, was found in Wuhan, China. |
T18 | 961-1166 | Sentence | denotes | As of 24 February 2020, there have been over 79,000 cases with over 2600 deaths for the 2019-nCoV/SARS-CoV-2 outbreak worldwide; furthermore, human-to-human transmission has occurred among close contacts6. |
T19 | 1167-1250 | Sentence | denotes | However, there are currently no effective medications against 2019-nCoV/SARS-CoV-2. |
T20 | 1251-1437 | Sentence | denotes | Several national and international research groups are working on the development of vaccines to prevent and treat the 2019-nCoV/SARS-CoV-2, but effective vaccines are not available yet. |
T21 | 1438-1565 | Sentence | denotes | There is an urgent need for the development of effective prevention and treatment strategies for 2019-nCoV/SARS-CoV-2 outbreak. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32194980-26868298-19614142 | 145-146 | 26868298 | denotes | 1 |
32194980-27344959-19614143 | 591-592 | 27344959 | denotes | 3 |
32194980-28643204-19614144 | 593-594 | 28643204 | denotes | 4 |
32194980-32007143-19614145 | 931-932 | 32007143 | denotes | 5 |