PMC:7073332 / 19760-20855
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
461 | 26-30 | Species | denotes | HCoV | Tax:694448 |
474 | 843-860 | Gene | denotes | estrogen receptor | Gene:2099 |
475 | 368-373 | Species | denotes | human | Tax:9606 |
476 | 258-262 | Species | denotes | HCoV | Tax:694448 |
477 | 335-339 | Species | denotes | HCoV | Tax:694448 |
478 | 432-436 | Species | denotes | HCoV | Tax:694448 |
479 | 613-617 | Chemical | denotes | GSEA | |
480 | 791-801 | Chemical | denotes | toremifene | MESH:D017312 |
481 | 875-885 | Chemical | denotes | irbesartan | MESH:D000077405 |
482 | 923-937 | Chemical | denotes | mercaptopurine | MESH:D015122 |
483 | 1020-1029 | Chemical | denotes | melatonin | MESH:D008550 |
484 | 1042-1047 | Chemical | denotes | amine | MESH:D000588 |
485 | 1071-1093 | Disease | denotes | rhythm sleep disorders | MESH:D012893 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T98 | 18-25 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T99 | 109-113 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
T100 | 274-282 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T101 | 351-359 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T102 | 374-381 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T103 | 382-389 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T104 | 448-455 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T105 | 493-501 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T106 | 568-576 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T107 | 843-851 | Body_part | denotes | estrogen | http://purl.org/sig/ont/fma/fma83376 |
T108 | 1020-1029 | Body_part | denotes | melatonin | http://purl.org/sig/ont/fma/fma74644 |
T109 | 1033-1047 | Body_part | denotes | biogenic amine | http://purl.org/sig/ont/fma/fma67161 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T71 | 1061-1093 | Disease | denotes | circadian rhythm sleep disorders | http://purl.obolibrary.org/obo/MONDO_0024361 |
T72 | 1078-1093 | Disease | denotes | sleep disorders | http://purl.obolibrary.org/obo/MONDO_0003406 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T137 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T138 | 76-77 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T139 | 109-113 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T140 | 368-381 | http://purl.obolibrary.org/obo/PR_000029067 | denotes | human protein |
T141 | 722-723 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T142 | 789-790 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T143 | 843-860 | http://purl.obolibrary.org/obo/PR_000007204 | denotes | estrogen receptor |
T144 | 1031-1032 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T195 | 13-17 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T196 | 18-25 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T197 | 69-74 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T198 | 182-187 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T199 | 235-239 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T200 | 274-282 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T201 | 311-316 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T202 | 351-359 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T203 | 374-381 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T204 | 382-389 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T205 | 420-424 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T206 | 448-455 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T207 | 493-501 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T208 | 568-576 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T209 | 635-640 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T210 | 661-663 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
T211 | 715-720 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T212 | 782-787 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T213 | 791-801 | Chemical | denotes | toremifene | http://purl.obolibrary.org/obo/CHEBI_9635 |
T214 | 843-870 | Chemical | denotes | estrogen receptor modulator | http://purl.obolibrary.org/obo/CHEBI_50739 |
T215 | 843-851 | Chemical | denotes | estrogen | http://purl.obolibrary.org/obo/CHEBI_50114 |
T216 | 852-870 | Chemical | denotes | receptor modulator | http://purl.obolibrary.org/obo/CHEBI_90710 |
T217 | 875-885 | Chemical | denotes | irbesartan | http://purl.obolibrary.org/obo/CHEBI_5959 |
T218 | 890-901 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
T219 | 923-937 | Chemical | denotes | mercaptopurine | http://purl.obolibrary.org/obo/CHEBI_50667 |
T220 | 942-956 | Chemical | denotes | antimetabolite | http://purl.obolibrary.org/obo/CHEBI_35221 |
T221 | 957-977 | Chemical | denotes | antineoplastic agent | http://purl.obolibrary.org/obo/CHEBI_35610 |
T222 | 983-1000 | Chemical | denotes | immunosuppressant | http://purl.obolibrary.org/obo/CHEBI_35705 |
T223 | 1020-1029 | Chemical | denotes | melatonin | http://purl.obolibrary.org/obo/CHEBI_16796 |
T224 | 1042-1047 | Chemical | denotes | amine | http://purl.obolibrary.org/obo/CHEBI_32952 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T24 | 1061-1077 | http://purl.obolibrary.org/obo/GO_0007623 | denotes | circadian rhythm |
T25 | 1071-1077 | http://purl.obolibrary.org/obo/GO_0048511 | denotes | rhythm |
T26 | 1078-1083 | http://purl.obolibrary.org/obo/GO_0030431 | denotes | sleep |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T120 | 76-198 | Sentence | denotes | a Network-predicted evidence and gene set enrichment analysis (GSEA) scores for 16 potential repurposable drugs for HCoVs. |
T121 | 199-296 | Sentence | denotes | The overall connectivity of the top drug candidates to the HCoV-associated proteins was examined. |
T122 | 297-411 | Sentence | denotes | Most of these drugs indirectly target HCoV-associated proteins via the human protein–protein interaction networks. |
T123 | 412-543 | Sentence | denotes | All the drug–target-HCoV-associated protein connections were examined, and those proteins with at least five connections are shown. |
T124 | 544-612 | Sentence | denotes | The box heights for the proteins indicate the number of connections. |
T125 | 613-1095 | Sentence | denotes | GSEA scores for eight drugs were not available (NA) due to the lack of transcriptome profiles for the drugs. b–e Inferred mechanism-of-action networks for four selected drugs: b toremifene (first-generation nonsteroidal-selective estrogen receptor modulator), c irbesartan (an angiotensin receptor blocker), d mercaptopurine (an antimetabolite antineoplastic agent with immunosuppressant properties), and e melatonin (a biogenic amine for treating circadian rhythm sleep disorders). |