PMC:7068984 / 2212-3240
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
96 | 77-90 | Species | denotes | β-coronavirus | Tax:694002 |
97 | 123-134 | Species | denotes | coronavirus | Tax:11118 |
98 | 163-185 | Species | denotes | 2019-novel coronavirus | Tax:2697049 |
99 | 187-196 | Species | denotes | 2019-nCoV | Tax:2697049 |
100 | 329-340 | Species | denotes | Coronavirus | Tax:11118 |
101 | 411-426 | Species | denotes | new coronavirus | Tax:2697049 |
102 | 430-440 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
103 | 517-527 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
104 | 535-542 | Species | denotes | patient | Tax:9606 |
105 | 622-632 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
106 | 815-825 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
107 | 1000-1005 | Species | denotes | human | Tax:9606 |
108 | 1009-1014 | Species | denotes | human | Tax:9606 |
109 | 31-40 | Disease | denotes | pneumonia | MESH:D011014 |
110 | 289-313 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
111 | 315-323 | Disease | denotes | COVID-19 | MESH:C000657245 |
112 | 685-693 | Disease | denotes | COVID-19 | MESH:C000657245 |
113 | 747-753 | Disease | denotes | deaths | MESH:D003643 |
114 | 915-924 | Disease | denotes | pneumonia | MESH:D011014 |
115 | 971-979 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T4 | 597-603 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T21 | 31-40 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T22 | 289-313 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T23 | 315-323 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T24 | 430-438 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T25 | 517-525 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T26 | 622-630 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T27 | 685-693 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T28 | 815-823 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T29 | 915-924 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T30 | 971-979 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13 | 18-19 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T14 | 58-59 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T15 | 233-245 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | Organization |
T16 | 457-459 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T17 | 515-516 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T18 | 533-534 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T19 | 550-551 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T20 | 658-659 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T21 | 997-1005 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | by human |
T22 | 1009-1014 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 787-799 | http://purl.obolibrary.org/obo/GO_0000003 | denotes | reproduction |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15 | 0-117 | Sentence | denotes | In December 2019, a cluster of pneumonia cases, caused by a newly identified β-coronavirus, occurred in Wuhan, China. |
T16 | 118-252 | Sentence | denotes | This coronavirus, was initially named as the 2019-novel coronavirus (2019-nCoV) on 12 January 2020 by World Health Organization (WHO). |
T17 | 253-474 | Sentence | denotes | WHO officially named the disease as coronavirus disease 2019 (COVID-19) and Coronavirus Study Group (CSG) of the International Committee proposed to name the new coronavirus as SARS-CoV-2, both issued on 11 February 2020. |
T18 | 475-637 | Sentence | denotes | The Chinese scientists rapidly isolated a SARS-CoV-2 from a patient within a short time on 7 January 2020 and came out to genome sequencing of the SARS-CoV-2 [1]. |
T19 | 638-758 | Sentence | denotes | As of 1 March 2020, a total of 79,968 cases of COVID-19 have been confirmed in mainland China including 2873 deaths [2]. |
T20 | 759-1028 | Sentence | denotes | Studies estimated the basic reproduction number (R0) of SARS-CoV-2 to be around 2.2 [3], or even more (range from 1.4 to 6.5) [4], and familial clusters of pneumonia [5] outbreaks add to evidence of the epidemic COVID-19 steadily growing by human-to-human transmission. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T8 | 31-40 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T9 | 915-924 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32169119-32007145-70132186 | 634-635 | 32007145 | denotes | 1 |
32169119-31986261-70132187 | 926-927 | 31986261 | denotes | 5 |