PMC:7068164 / 9729-10255
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 136 | 186-190 | Gene | denotes | RdRp | Gene:43740578 |
| 137 | 215-216 | Gene | denotes | N | Gene:43740575 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T4 | 127-131 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T5 | 156-159 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T6 | 170-173 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T7 | 192-196 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T8 | 218-222 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T9 | 359-365 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T10 | 398-404 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T3 | 359-365 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T4 | 398-404 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T73 | 107-112 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
| T74 | 127-131 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T75 | 135-136 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T76 | 147-151 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T77 | 192-196 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T78 | 218-222 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T79 | 268-274 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T80 | 293-295 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T81 | 414-415 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T82 | 450-451 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T83 | 493-494 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T104 | 0-20 | Sentence | denotes | Laboratory diagnosis |
| T105 | 21-248 | Sentence | denotes | All cases were confirmed according to specific assays targeting at least two separate genes (envelope (E) gene as a screening test and RNA-dependent RNA polymerase (RdRp) gene or nucleoprotein (N) gene for confirmation) [8,17]. |
| T106 | 249-302 | Sentence | denotes | The specimen types tested were reported for 27 cases: |
| T107 | 303-526 | Sentence | denotes | 15 had positive nasopharyngeal swabs, nine had positive throat swabs, three cases had positive sputum, two had a positive nasal swab, one case had a positive nasopharyngeal aspirate and one a positive endotracheal aspirate. |