PMC:7068163 / 6313-6961 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"96","span":{"begin":153,"end":161},"obj":"Species"},{"id":"97","span":{"begin":215,"end":222},"obj":"Species"},{"id":"100","span":{"begin":433,"end":434},"obj":"Gene"},{"id":"101","span":{"begin":353,"end":361},"obj":"Species"},{"id":"106","span":{"begin":482,"end":483},"obj":"Gene"},{"id":"107","span":{"begin":553,"end":554},"obj":"Gene"},{"id":"108","span":{"begin":530,"end":547},"obj":"Species"},{"id":"109","span":{"begin":572,"end":580},"obj":"Species"}],"attributes":[{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"Tax:694009"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"Tax:9606"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"Gene:43740570"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"Tax:694009"},{"id":"A106","pred":"tao:has_database_id","subj":"106","obj":"Gene:43740570"},{"id":"A107","pred":"tao:has_database_id","subj":"107","obj":"Gene:43740570"},{"id":"A108","pred":"tao:has_database_id","subj":"108","obj":"Tax:2697049"},{"id":"A109","pred":"tao:has_database_id","subj":"109","obj":"Tax:694009"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T18","span":{"begin":164,"end":168},"obj":"Body_part"},{"id":"T19","span":{"begin":309,"end":313},"obj":"Body_part"},{"id":"T20","span":{"begin":374,"end":377},"obj":"Body_part"},{"id":"T21","span":{"begin":435,"end":439},"obj":"Body_part"},{"id":"T22","span":{"begin":484,"end":488},"obj":"Body_part"},{"id":"T23","span":{"begin":555,"end":559},"obj":"Body_part"},{"id":"T24","span":{"begin":593,"end":596},"obj":"Body_part"}],"attributes":[{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T29","span":{"begin":153,"end":161},"obj":"Disease"},{"id":"T30","span":{"begin":353,"end":361},"obj":"Disease"},{"id":"T31","span":{"begin":572,"end":580},"obj":"Disease"}],"attributes":[{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A30","pred":"mondo_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T58","span":{"begin":50,"end":53},"obj":"http://purl.obolibrary.org/obo/CLO_0051456"},{"id":"T59","span":{"begin":72,"end":73},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T60","span":{"begin":138,"end":145},"obj":"http://purl.obolibrary.org/obo/SO_0000418"},{"id":"T61","span":{"begin":164,"end":168},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T62","span":{"begin":208,"end":214},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T63","span":{"begin":309,"end":313},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T64","span":{"begin":322,"end":328},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T65","span":{"begin":435,"end":439},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T66","span":{"begin":484,"end":488},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T67","span":{"begin":490,"end":496},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T68","span":{"begin":555,"end":559},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T13","span":{"begin":30,"end":32},"obj":"Chemical"}],"attributes":[{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_73419"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"LitCovid-sentences","denotations":[{"id":"T47","span":{"begin":0,"end":49},"obj":"Sentence"},{"id":"T48","span":{"begin":50,"end":71},"obj":"Sentence"},{"id":"T49","span":{"begin":72,"end":292},"obj":"Sentence"},{"id":"T50","span":{"begin":293,"end":424},"obj":"Sentence"},{"id":"T51","span":{"begin":425,"end":466},"obj":"Sentence"},{"id":"T52","span":{"begin":467,"end":648},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"2_test","denotations":[{"id":"32156330-30059721-29325819","span":{"begin":379,"end":380},"obj":"30059721"},{"id":"32156330-30059721-29325820","span":{"begin":603,"end":604},"obj":"30059721"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}

{"project":"MyTest","denotations":[{"id":"32156330-30059721-29325819","span":{"begin":379,"end":380},"obj":"30059721"},{"id":"32156330-30059721-29325820","span":{"begin":603,"end":604},"obj":"30059721"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"NC: negative control samples; ND: not determined.\na E = 10−1/slope − 1.\nb Indicated counts and percentage values of unspecific background signals in the SARS-CoV E gene assay are based on the total number of tested patient samples as well as the negative extraction and non-template controls.\nc Only for RdRp gene assays, tested with four replicates of SARS-CoV Frankfurt 1 RNA [6]; 10-fold serial dilutions were determined. For the E gene, the assay was not linear.\nd Only for the E gene, tested with two replicates of synthetic Wuhan coronavirus 2019 E gene control and SARS-CoV Frankfurt 1 RNA each [6]; 10-fold serial dilutions were determined."}