PMC:7068163 / 11010-11629 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7068163","sourcedb":"PMC","sourceid":"7068163","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7068163","text":"On 7 January 2020, a novel coronavirus was identified and shortly after, the first sequence of the new strain was published [9,10]. The main task of public health authorities is to react quickly to emerging pathogens of global threat to prevent spread. These responses include containment strategies, which means that close contacts of patients have to be identified and tested immediately. Reusken et al. identified the availability of positive control material and primer/probes as well as the lack of skilled personnel and time as the most prominent challenges in the implementation of the new SARS-CoV-2 assay [11].","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"155","span":{"begin":21,"end":38},"obj":"Species"},{"id":"156","span":{"begin":336,"end":344},"obj":"Species"},{"id":"157","span":{"begin":597,"end":607},"obj":"Species"}],"attributes":[{"id":"A155","pred":"tao:has_database_id","subj":"155","obj":"Tax:2697049"},{"id":"A156","pred":"tao:has_database_id","subj":"156","obj":"Tax:9606"},{"id":"A157","pred":"tao:has_database_id","subj":"157","obj":"Tax:2697049"},{"subj":"155","pred":"source","obj":"LitCovid-PubTator"},{"subj":"156","pred":"source","obj":"LitCovid-PubTator"},{"subj":"157","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T41","span":{"begin":597,"end":605},"obj":"Disease"}],"attributes":[{"id":"A41","pred":"mondo_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T41","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T106","span":{"begin":19,"end":20},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T107","span":{"begin":371,"end":377},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T108","span":{"begin":615,"end":617},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"}],"attributes":[{"subj":"T106","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T107","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T108","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T90","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"T91","span":{"begin":132,"end":252},"obj":"Sentence"},{"id":"T92","span":{"begin":253,"end":390},"obj":"Sentence"},{"id":"T93","span":{"begin":391,"end":619},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T90","pred":"source","obj":"LitCovid-sentences"},{"subj":"T91","pred":"source","obj":"LitCovid-sentences"},{"subj":"T92","pred":"source","obj":"LitCovid-sentences"},{"subj":"T93","pred":"source","obj":"LitCovid-sentences"}]},{"project":"2_test","denotations":[{"id":"32156330-32004165-29325824","span":{"begin":125,"end":126},"obj":"32004165"},{"id":"32156330-32015508-29325825","span":{"begin":127,"end":129},"obj":"32015508"},{"id":"32156330-32046815-29325826","span":{"begin":615,"end":617},"obj":"32046815"}],"attributes":[{"subj":"32156330-32004165-29325824","pred":"source","obj":"2_test"},{"subj":"32156330-32015508-29325825","pred":"source","obj":"2_test"},{"subj":"32156330-32046815-29325826","pred":"source","obj":"2_test"}]},{"project":"MyTest","denotations":[{"id":"32156330-32004165-29325824","span":{"begin":125,"end":126},"obj":"32004165"},{"id":"32156330-32015508-29325825","span":{"begin":127,"end":129},"obj":"32015508"},{"id":"32156330-32046815-29325826","span":{"begin":615,"end":617},"obj":"32046815"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"attributes":[{"subj":"32156330-32004165-29325824","pred":"source","obj":"MyTest"},{"subj":"32156330-32015508-29325825","pred":"source","obj":"MyTest"},{"subj":"32156330-32046815-29325826","pred":"source","obj":"MyTest"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec9397","default":true},{"id":"LitCovid-PD-MONDO","color":"#93b1ec"},{"id":"LitCovid-PD-CLO","color":"#cbec93"},{"id":"LitCovid-sentences","color":"#ec93e5"},{"id":"2_test","color":"#93ecd9"},{"id":"MyTest","color":"#ecbf93"}]}]}}