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PMC:7067204 / 1699-25671 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
136 1108-1111 Gene denotes the Gene:25085
137 1049-1052 Gene denotes the Gene:25085
138 875-878 Gene denotes the Gene:25085
139 589-592 Gene denotes The Gene:25085
140 449-452 Gene denotes the Gene:25085
141 383-386 Gene denotes the Gene:25085
142 108-111 Gene denotes the Gene:25085
143 1197-1199 Gene denotes to Gene:6999
144 706-708 Gene denotes to Gene:6999
145 923-925 Gene denotes of Gene:6688
146 466-468 Gene denotes of Gene:6688
147 400-402 Gene denotes of Gene:6688
148 13-26 Species denotes Coronaviruses Tax:11118
149 28-32 Species denotes CoVs Tax:11118
150 203-207 Species denotes CoVs Tax:11118
151 242-257 Species denotes Betacoronavirus Tax:694002
152 259-263 Species denotes βCoV Tax:694002
153 491-495 Species denotes CoVs Tax:11118
154 572-577 Species denotes human Tax:9606
155 660-668 Species denotes SARS-CoV Tax:694009
156 785-821 Species denotes Middle East respiratory syndrome CoV Tax:1335626
157 823-831 Species denotes MERS-CoV Tax:1335626
158 1033-1042 Species denotes mammalian Tax:9606
159 1075-1089 Species denotes Paguma larvata Tax:9675
160 1095-1103 Species denotes SARS-CoV Tax:694009
161 1112-1121 Species denotes dromedary Tax:9838
162 1122-1127 Species denotes camel Tax:9838
163 1129-1148 Species denotes Camelus dromedarius Tax:9838
164 1154-1162 Species denotes MERS-CoV Tax:1335626
165 1207-1213 Species denotes humans Tax:9606
166 754-764 Disease denotes infections MESH:D007239
167 773-779 Disease denotes deaths MESH:D003643
222 2300-2302 Gene denotes As Gene:112935892
223 1844-1846 Gene denotes as Gene:112935892
224 2531-2534 Gene denotes The Gene:25085
225 2470-2473 Gene denotes The Gene:25085
226 2083-2086 Gene denotes the Gene:25085
227 1422-1425 Gene denotes The Gene:25085
228 2644-2646 Gene denotes to Gene:6999
229 2355-2357 Gene denotes to Gene:6999
230 2550-2552 Gene denotes of Gene:6688
231 2488-2490 Gene denotes of Gene:6688
232 2423-2425 Gene denotes of Gene:6688
233 2303-2305 Gene denotes of Gene:6688
234 2154-2156 Gene denotes of Gene:6688
235 2141-2143 Gene denotes of Gene:6688
236 2132-2134 Gene denotes of Gene:6688
237 2024-2026 Gene denotes of Gene:6688
238 1241-1245 Species denotes CoVs Tax:11118
239 1267-1272 Species denotes human Tax:9606
240 1292-1301 Species denotes HCoV-229E Tax:11137
241 1322-1326 Species denotes βCoV Tax:694002
242 1328-1337 Species denotes HCoV-OC43 Tax:31631
243 1351-1360 Species denotes HCoV-HKU1 Tax:290028
244 1374-1382 Species denotes SARS-CoV Tax:694009
245 1399-1407 Species denotes MERS-CoV Tax:1335626
246 1426-1430 Species denotes βCoV Tax:694002
247 1441-1450 Species denotes HCoV-OC43 Tax:31631
248 1455-1464 Species denotes HCoV-HKU1 Tax:290028
249 1656-1664 Species denotes SARS-CoV Tax:694009
250 1676-1680 Species denotes βCoV Tax:694002
251 1686-1694 Species denotes MERS-CoV Tax:1335626
252 1706-1710 Species denotes βCoV Tax:694002
253 2258-2267 Species denotes novel CoV Tax:2697049
254 2290-2298 Species denotes patients Tax:9606
255 2326-2334 Species denotes patients Tax:9606
256 2383-2392 Species denotes novel CoV Tax:2697049
257 2559-2567 Species denotes patients Tax:9606
258 2737-2745 Species denotes patients Tax:9606
259 1493-1521 Disease denotes upper respiratory infections MESH:D012141
260 1570-1598 Disease denotes respiratory tract infections MESH:D012141
261 1735-1762 Disease denotes respiratory tract infection MESH:D012141
262 1768-1803 Disease denotes acute respiratory distress syndrome MESH:D012128
263 1847-1855 Disease denotes diarrhea MESH:D003967
264 1857-1868 Disease denotes lymphopenia MESH:D008231
265 1915-1946 Disease denotes multiorgan dysfunction syndrome MESH:D009102
266 2008-2017 Disease denotes mortality MESH:D003643
267 2144-2153 Disease denotes pneumonia MESH:D011014
268 2363-2372 Disease denotes infection MESH:D007239
269 2431-2440 Disease denotes pneumonia MESH:D011014
270 2577-2582 Disease denotes fever MESH:D005334
271 2584-2591 Disease denotes malaise MESH:D005221
272 2593-2602 Disease denotes dry cough MESH:D003371
273 2608-2615 Disease denotes dyspnea MESH:D004417
274 2724-2728 Disease denotes died MESH:D003643
275 2750-2759 Disease denotes pneumonia MESH:D011014
286 3125-3128 Gene denotes the Gene:25085
287 3070-3073 Gene denotes the Gene:25085
288 2950-2953 Gene denotes the Gene:25085
289 2932-2934 Gene denotes to Gene:6999
290 3082-3084 Gene denotes of Gene:6688
291 2868-2870 Gene denotes of Gene:6688
292 2983-2992 Species denotes 2019-nCoV Tax:2697049
293 3016-3023 Species denotes patient Tax:9606
294 3095-3099 Species denotes CoVs Tax:11118
295 2871-2890 Disease denotes 2019-nCoV infection MESH:C000657245
369 5179-5182 Gene denotes Bat Gene:570
370 5122-5125 Gene denotes Bat Gene:570
371 5065-5068 Gene denotes Bat Gene:570
372 4828-4831 Gene denotes Bat Gene:570
373 4760-4763 Gene denotes Bat Gene:570
374 4730-4733 Gene denotes bat Gene:570
375 4674-4677 Gene denotes Bat Gene:570
376 4645-4648 Gene denotes bat Gene:570
377 4590-4593 Gene denotes Bat Gene:570
378 4512-4515 Gene denotes Bat Gene:570
379 4434-4437 Gene denotes Bat Gene:570
380 4364-4367 Gene denotes Bat Gene:570
381 4290-4293 Gene denotes Bat Gene:570
382 4230-4233 Gene denotes Bat Gene:570
383 3699-3702 Gene denotes the Gene:25085
384 4153-4157 Gene denotes SARS Gene:6301
385 3755-3763 Species denotes SARS-CoV Tax:694009
386 3774-3798 Species denotes SARS-related coronavirus Tax:694009
387 3832-3840 Species denotes SARS-CoV Tax:694009
388 3851-3872 Species denotes SARS coronavirus BJ01 Tax:228407
389 3887-3913 Species denotes SARS coronavirus HKU-39849 Tax:228404
390 3919-3945 Species denotes SARS coronavirus HKU-39849 Tax:228404
391 3965-3970 Species denotes Human Tax:9606
392 3971-3979 Species denotes SARS-CoV Tax:694009
393 3990-4011 Species denotes SARS coronavirus GZ02 Tax:256753
394 4026-4031 Species denotes Human Tax:9606
395 4032-4035 Species denotes CoV Tax:11118
396 4046-4068 Species denotes Human coronavirus OC43 Tax:31631
397 4116-4144 Species denotes SARS coronavirus HC/SZ/61/03 Tax:260069
398 4173-4185 Species denotes Bat CoV HKU9 Tax:694006
399 4193-4215 Species denotes Bat coronavirus HKU9-1 Tax:424367
400 4237-4240 Species denotes CoV Tax:11118
401 4252-4275 Species denotes Bat SARS CoV Rs672/2006 Tax:722424
402 4297-4300 Species denotes CoV Tax:11118
403 4315-4349 Species denotes Bat SARS-like coronavirus RsSHC014 Tax:1415851
404 4371-4374 Species denotes CoV Tax:11118
405 4387-4419 Species denotes Bat SARS-like coronavirus Rs3367 Tax:1415834
406 4441-4444 Species denotes CoV Tax:11118
407 4457-4482 Species denotes Bat SARS-like coronavirus Tax:1508227
408 4519-4522 Species denotes CoV Tax:11118
409 4535-4560 Species denotes Bat SARS-like coronavirus Tax:1508227
410 4597-4600 Species denotes CoV Tax:11118
411 4611-4636 Species denotes Bat SARS-like coronavirus Tax:1508227
412 4681-4684 Species denotes CoV Tax:11118
413 4696-4721 Species denotes Bat SARS-like coronavirus Tax:1508227
414 4764-4767 Species denotes CoV Tax:11118
415 4781-4813 Species denotes Coronavirus BtRs-BetaCoV/YN2018C Tax:2591236
416 4832-4835 Species denotes CoV Tax:11118
417 4849-4860 Species denotes Coronavirus Tax:11118
418 4866-4873 Species denotes BetaCoV Tax:694002
419 4909-4914 Species denotes Human Tax:9606
420 4915-4924 Species denotes 2019-nCoV Tax:2697049
421 4951-4956 Species denotes Human Tax:9606
422 4957-4960 Species denotes CoV Tax:11118
423 4971-4993 Species denotes Human coronavirus 229E Tax:11137
424 5008-5022 Species denotes Human CoV HKU1 Tax:290028
425 5028-5050 Species denotes Human coronavirus HKU1 Tax:290028
426 5069-5072 Species denotes CoV Tax:11118
427 5085-5107 Species denotes Bat coronavirus HKU4-1 Tax:424359
428 5126-5129 Species denotes CoV Tax:11118
429 5142-5164 Species denotes Bat coronavirus HKU5-1 Tax:424363
430 5183-5199 Species denotes SARS-related CoV Tax:694009
431 5213-5245 Species denotes Bat coronavirus BM48-31/BGR/2008 Tax:864596
432 5260-5265 Species denotes Human Tax:9606
433 5266-5274 Species denotes MERS-CoV Tax:1335626
434 5280-5324 Species denotes Middle East respiratory syndrome coronavirus Tax:1335626
435 3980-3984 Species denotes GZ02 Tax:256753
436 4099-4110 Species denotes HC/SZ/61/03 Tax:260069
437 4241-4251 Species denotes Rs672 2006 Tax:722424
438 4961-4965 Species denotes 229E Tax:11137
439 5073-5079 Species denotes HKU4-1 Tax:424359
440 5130-5136 Species denotes HKU5-1 Tax:424363
441 4888-4900 CellLine denotes MN975262 HKU CVCL:U508
443 3630-3643 Species denotes coronaviruses Tax:11118
447 5382-5385 Gene denotes the Gene:25085
448 5370-5372 Gene denotes to Gene:6999
449 5330-5345 Chemical denotes aOne nucleotide
461 3596-3598 Gene denotes as Gene:112935892
462 3599-3602 Gene denotes the Gene:25085
463 3325-3328 Gene denotes The Gene:25085
464 3210-3213 Gene denotes The Gene:25085
465 3361-3363 Gene denotes of Gene:6688
466 3239-3241 Gene denotes of Gene:6688
467 3242-3251 Species denotes 2019-nCoV Tax:2697049
468 3407-3412 Species denotes human Tax:9606
469 3502-3507 Species denotes human Tax:9606
470 3575-3588 Species denotes E coronavirus Tax:28293
471 3304-3312 CellLine denotes MN975262 CVCL:U508
510 5776-5779 Gene denotes The Gene:25085
511 6008-6011 Gene denotes the Gene:25085
512 6849-6852 Gene denotes the Gene:25085
513 7134-7136 Gene denotes as Gene:112935892
514 5843-5845 Gene denotes as Gene:112935892
515 7158-7161 Gene denotes the Gene:25085
516 7089-7092 Gene denotes The Gene:25085
517 6913-6916 Gene denotes the Gene:25085
518 6753-6756 Gene denotes the Gene:25085
519 6673-6676 Gene denotes the Gene:25085
520 6426-6429 Gene denotes the Gene:25085
521 6021-6024 Gene denotes the Gene:25085
522 5966-5969 Gene denotes the Gene:25085
523 5919-5922 Gene denotes The Gene:25085
524 5896-5899 Gene denotes the Gene:25085
525 5855-5858 Gene denotes the Gene:25085
526 5828-5831 Gene denotes the Gene:25085
527 5757-5760 Gene denotes the Gene:25085
528 5702-5705 Gene denotes the Gene:25085
529 5660-5663 Gene denotes the Gene:25085
530 5617-5620 Gene denotes The Gene:25085
531 5490-5493 Gene denotes the Gene:25085
532 7148-7150 Gene denotes to Gene:6999
533 5887-5889 Gene denotes to Gene:6999
534 5795-5797 Gene denotes to Gene:6999
535 5754-5756 Gene denotes to Gene:6999
536 6334-6338 Gene denotes orf8 Gene:43740577
537 7120-7123 Gene denotes UTR Gene:2837
538 6708-6710 Gene denotes of Gene:6688
539 6441-6443 Gene denotes of Gene:6688
540 6331-6333 Gene denotes of Gene:6688
541 6032-6034 Gene denotes of Gene:6688
542 6018-6020 Gene denotes of Gene:6688
543 5852-5854 Gene denotes of Gene:6688
544 5632-5634 Gene denotes of Gene:6688
545 7099-7107 Species denotes SARS-CoV Tax:694009
546 6888-6892 Gene denotes -UTR Gene:2837
547 6877-6880 Gene denotes UTR Gene:2837
575 8447-8450 Gene denotes bat Gene:570
576 8513-8516 Gene denotes The Gene:25085
577 8237-8240 Gene denotes the Gene:25085
578 8197-8200 Gene denotes the Gene:25085
579 7861-7864 Gene denotes the Gene:25085
580 7821-7824 Gene denotes The Gene:25085
581 8267-8271 Gene denotes -UTR Gene:2837
582 7891-7895 Gene denotes -UTR Gene:2837
583 8297-8299 Gene denotes to Gene:6999
584 8027-8032 Gene denotes spike Gene:43740568
585 8524-8526 Gene denotes of Gene:6688
586 8283-8285 Gene denotes of Gene:6688
587 7858-7860 Gene denotes of Gene:6688
588 7784-7799 Species denotes Betacoronavirus Tax:694002
589 7825-7840 Species denotes betacoronavirus Tax:694002
590 8077-8084 Species denotes red box Tax:1226038
591 8201-8210 Species denotes 2019-nCoV Tax:2697049
592 8302-8319 Species denotes betacoronaviruses Tax:694002
593 8328-8345 Species denotes human coronavirus Tax:694448
594 8347-8357 Species denotes HCoV) HKU1 Tax:290028
595 8371-8380 Species denotes 2019-nCoV Tax:2697049
596 8399-8407 Species denotes SARS-CoV Tax:694009
597 8421-8429 Species denotes MERS-CoV Tax:1335626
598 8451-8454 Species denotes CoV Tax:11118
599 8487-8499 Species denotes bat CoV HKU9 Tax:694006
600 8434-8446 Species denotes Tylonycteris Tax:694007
601 8455-8459 Species denotes HKU4 Tax:694007
620 7616-7617 Gene denotes S Gene:43740568
621 7609-7614 Gene denotes Spike Gene:43740568
622 7629-7630 Gene denotes E Gene:43740570
623 7676-7679 Gene denotes the Gene:25085
624 7552-7555 Gene denotes the Gene:25085
625 7516-7519 Gene denotes The Gene:25085
626 7384-7387 Gene denotes the Gene:25085
627 7333-7336 Gene denotes The Gene:25085
628 7261-7264 Gene denotes the Gene:25085
629 7227-7230 Gene denotes The Gene:25085
630 7368-7370 Gene denotes to Gene:6999
631 7579-7583 Gene denotes orf1 Gene:55354
632 7562-7564 Gene denotes of Gene:6688
633 7258-7260 Gene denotes of Gene:6688
634 7265-7274 Species denotes 2019-nCoV Tax:2697049
635 7388-7397 Species denotes 2019-nCoV Tax:2697049
636 7520-7529 Species denotes 2019-nCoV Tax:2697049
637 7757-7761 Species denotes CoVs Tax:11118
643 10620-10623 Gene denotes the Gene:25085
644 10962-10964 Gene denotes of Gene:6688
645 10656-10658 Gene denotes of Gene:6688
646 10628-10630 Gene denotes of Gene:6688
647 10733-10741 Gene denotes helicase Gene:164045
650 9914-9916 Gene denotes as Gene:112935892
651 9874-9876 Gene denotes of Gene:6688
658 11135-11138 Gene denotes bat Gene:570
659 11348-11353 Gene denotes Spike Gene:43740568
660 11450-11454 Gene denotes Orf8 Gene:43740577
661 11109-11118 Species denotes 2019-nCoV Tax:2697049
662 11119-11128 Species denotes 2019-nCoV Tax:2697049
663 11155-11163 Species denotes SARS-CoV Tax:694009
668 11009-11012 Gene denotes the Gene:25085
669 11013-11035 Species denotes 2019 novel coronavirus Tax:2697049
670 11040-11065 Species denotes bat SARS-like coronavirus Tax:1508227
671 11075-11083 Species denotes SARS-CoV Tax:694009
704 9408-9417 Gene denotes helicase) Gene:164045
705 9583-9585 Gene denotes of Gene:6688
706 9630-9633 Gene denotes The Gene:25085
707 9565-9568 Gene denotes the Gene:25085
708 9500-9503 Gene denotes the Gene:25085
709 9463-9466 Gene denotes the Gene:25085
710 9121-9124 Gene denotes the Gene:25085
711 9100-9103 Gene denotes the Gene:25085
712 9047-9050 Gene denotes the Gene:25085
713 8988-8991 Gene denotes The Gene:25085
714 8871-8874 Gene denotes The Gene:25085
715 8803-8806 Gene denotes The Gene:25085
716 8716-8719 Gene denotes the Gene:25085
717 9784-9786 Gene denotes to Gene:6999
718 8926-8928 Gene denotes to Gene:6999
719 9738-9743 Gene denotes Spike Gene:43740568
720 9696-9701 Gene denotes Spike Gene:43740568
721 9751-9755 Gene denotes orf8 Gene:43740577
722 9706-9710 Gene denotes orf8 Gene:43740577
723 8887-8890 Gene denotes UTR Gene:2837
724 9607-9609 Gene denotes of Gene:6688
725 9497-9499 Gene denotes of Gene:6688
726 9118-9120 Gene denotes of Gene:6688
727 8977-8979 Gene denotes of Gene:6688
728 8935-8937 Gene denotes of Gene:6688
729 8901-8903 Gene denotes of Gene:6688
730 8654-8656 Gene denotes of Gene:6688
731 8904-8913 Species denotes 2019-nCoV Tax:2697049
732 9586-9595 Species denotes 2019-nCoV Tax:2697049
733 9610-9618 Species denotes SARS-CoV Tax:694009
734 9660-9669 Species denotes SARSr-CoV Tax:694009
735 9674-9682 Species denotes SARS-CoV Tax:694009
754 13712-13715 Gene denotes bat Gene:570
755 13692-13695 Gene denotes bat Gene:570
756 14008-14011 Gene denotes the Gene:25085
757 13990-13993 Gene denotes the Gene:25085
758 13965-13968 Gene denotes the Gene:25085
759 13946-13949 Gene denotes the Gene:25085
760 13920-13923 Gene denotes The Gene:25085
761 13573-13578 Gene denotes Spike Gene:43740568
762 13527-13532 Gene denotes Spike Gene:43740568
763 14005-14007 Gene denotes of Gene:6688
764 13603-13605 Gene denotes of Gene:6688
765 13570-13572 Gene denotes of Gene:6688
766 13524-13526 Gene denotes of Gene:6688
767 13503-13505 Gene denotes of Gene:6688
768 13606-13615 Species denotes 2019-nCoV Tax:2697049
769 13657-13682 Species denotes bat SARS-like coronavirus Tax:1508227
770 13797-13813 Species denotes SARS coronavirus Tax:694009
771 13646-13654 CellLine denotes MN975262 CVCL:U508
804 14742-14745 Gene denotes the Gene:25085
805 14523-14526 Gene denotes Tor Gene:6097
806 14380-14383 Gene denotes bat Gene:570
807 14356-14359 Gene denotes bat Gene:570
808 14335-14338 Gene denotes bat Gene:570
809 14318-14321 Gene denotes bat Gene:570
810 14301-14304 Gene denotes bat Gene:570
811 15218-15221 Gene denotes the Gene:25085
812 14923-14926 Gene denotes the Gene:25085
813 14857-14860 Gene denotes the Gene:25085
814 14810-14813 Gene denotes the Gene:25085
815 14710-14713 Gene denotes The Gene:25085
816 14182-14187 Gene denotes Spike Gene:43740568
817 14087-14092 Gene denotes Spike Gene:43740568
818 15132-15134 Gene denotes of Gene:6688
819 15079-15081 Gene denotes of Gene:6688
820 14868-14870 Gene denotes of Gene:6688
821 14807-14809 Gene denotes of Gene:6688
822 14212-14214 Gene denotes of Gene:6688
823 14179-14181 Gene denotes of Gene:6688
824 14081-14083 Gene denotes of Gene:6688
825 14060-14062 Gene denotes of Gene:6688
826 14215-14224 Species denotes 2019-nCoV Tax:2697049
827 14266-14291 Species denotes bat SARS-like coronavirus Tax:1508227
828 14342-14345 Species denotes CoV Tax:11118
829 14363-14366 Species denotes CoV Tax:11118
830 14387-14390 Species denotes CoV Tax:11118
831 14497-14518 Species denotes SARS coronavirus GZ02 Tax:256753
832 14594-14602 Species denotes SARS-CoV Tax:694009
833 15082-15091 Species denotes 2019-nCoV Tax:2697049
834 14391-14395 Species denotes HKU3 Tax:290028
835 14255-14263 CellLine denotes MN975262 CVCL:U508
894 11558-11561 Gene denotes The Gene:25085
895 12432-12434 Gene denotes of Gene:6688
896 13035-13038 Gene denotes bat Gene:570
897 12747-12750 Gene denotes bat Gene:570
898 12250-12253 Gene denotes bat Gene:570
899 11927-11930 Gene denotes bat Gene:570
900 12966-12968 Gene denotes as Gene:112935892
901 12909-12911 Gene denotes as Gene:112935892
902 13359-13362 Gene denotes the Gene:25085
903 13324-13327 Gene denotes The Gene:25085
904 13159-13162 Gene denotes the Gene:25085
905 13027-13030 Gene denotes the Gene:25085
906 12912-12915 Gene denotes the Gene:25085
907 12797-12800 Gene denotes the Gene:25085
908 12531-12534 Gene denotes the Gene:25085
909 12503-12506 Gene denotes the Gene:25085
910 12454-12457 Gene denotes the Gene:25085
911 12405-12408 Gene denotes the Gene:25085
912 12337-12340 Gene denotes the Gene:25085
913 12303-12306 Gene denotes the Gene:25085
914 12242-12245 Gene denotes the Gene:25085
915 12176-12179 Gene denotes the Gene:25085
916 12006-12009 Gene denotes the Gene:25085
917 11919-11922 Gene denotes the Gene:25085
918 11833-11836 Gene denotes the Gene:25085
919 11680-11683 Gene denotes the Gene:25085
920 13094-13096 Gene denotes to Gene:6999
921 13014-13016 Gene denotes to Gene:6999
922 12231-12233 Gene denotes to Gene:6999
923 13363-13368 Gene denotes Spike Gene:43740568
924 12801-12806 Gene denotes spike Gene:43740568
925 11506-11511 Gene denotes Spike Gene:43740568
926 12254-12258 Gene denotes SARS Gene:6301
927 12572-12574 Gene denotes of Gene:6688
928 12402-12404 Gene denotes of Gene:6688
929 12239-12241 Gene denotes of Gene:6688
930 12191-12193 Gene denotes of Gene:6688
931 11916-11918 Gene denotes of Gene:6688
932 11848-11850 Gene denotes of Gene:6688
933 11535-11537 Gene denotes of Gene:6688
934 11851-11860 Species denotes 2019-nCoV Tax:2697049
935 11941-11945 Species denotes CoVs Tax:11118
936 11950-11953 Species denotes CoV Tax:11118
937 11980-11988 Species denotes SARS-CoV Tax:694009
938 12194-12203 Species denotes 2019-nCoV Tax:2697049
939 12264-12268 Species denotes CoVs Tax:11118
940 12279-12287 Species denotes SARS-CoV Tax:694009
941 12706-12715 Species denotes 2019-nCoV Tax:2697049
942 12726-12734 Species denotes SARS-CoV Tax:694009
943 12757-12761 Species denotes CoVs Tax:11118
944 12870-12878 Species denotes SARS-CoV Tax:694009
945 12955-12960 Species denotes human Tax:9606
946 13039-13063 Species denotes SARS-related coronavirus Tax:694009
947 13097-13106 Species denotes 2019-nCoV Tax:2697049
948 13128-13132 Species denotes rats Tax:10116
949 11931-11935 Gene denotes SARS Gene:6301
950 13143-13155 Disease denotes inflammation MESH:D007249
951 13280-13282 CellLine denotes E6 CVCL:4582
957 16675-16677 Gene denotes of Gene:6688
958 16643-16645 Gene denotes of Gene:6688
959 16709-16718 Species denotes 2019-nCoV Tax:2697049
960 16734-16742 Species denotes SARS-CoV Tax:694009
961 16747-16763 Species denotes SARS-related CoV Tax:694009
991 15761-15763 Gene denotes as Gene:112935892
992 16404-16406 Gene denotes of Gene:6688
993 16479-16482 Gene denotes bat Gene:570
994 16003-16006 Gene denotes bat Gene:570
995 15752-15754 Gene denotes as Gene:112935892
996 16533-16536 Gene denotes The Gene:25085
997 16407-16410 Gene denotes the Gene:25085
998 16071-16074 Gene denotes the Gene:25085
999 15885-15887 Gene denotes to Gene:6999
1000 15483-15485 Gene denotes to Gene:6999
1001 15465-15467 Gene denotes to Gene:6999
1002 15318-15320 Gene denotes to Gene:6999
1003 15342-15346 Gene denotes SARS Gene:6301
1004 16548-16550 Gene denotes of Gene:6688
1005 16114-16116 Gene denotes of Gene:6688
1006 15907-15909 Gene denotes of Gene:6688
1007 15492-15494 Gene denotes of Gene:6688
1008 15330-15338 Species denotes SARS-CoV Tax:694009
1009 15349-15352 Species denotes CoV Tax:11118
1010 15415-15423 Species denotes SARS-CoV Tax:694009
1011 16007-16023 Species denotes SARS-related-CoV Tax:694009
1012 16117-16125 Species denotes SARS-CoV Tax:694009
1013 16187-16203 Species denotes SARS-related-CoV Tax:694009
1014 16483-16499 Species denotes SARS-related-CoV Tax:694009
1015 16571-16580 Species denotes 2019-nCoV Tax:2697049
1016 15743-15751 Disease denotes necrosis MESH:D009336
1017 15814-15822 Disease denotes necrosis MESH:D009336
1018 15665-15667 CellLine denotes E6 CVCL:4582
1019 15676-15680 CellLine denotes 293T CVCL:0063
1043 19199-19202 Gene denotes bat Gene:570
1044 19679-19682 Gene denotes the Gene:25085
1045 19661-19664 Gene denotes the Gene:25085
1046 19630-19633 Gene denotes the Gene:25085
1047 19611-19614 Gene denotes the Gene:25085
1048 19579-19582 Gene denotes The Gene:25085
1049 19448-19451 Gene denotes the Gene:25085
1050 19399-19402 Gene denotes The Gene:25085
1051 19349-19352 Gene denotes the Gene:25085
1052 19003-19005 Gene denotes to Gene:6999
1053 19732-19736 Gene denotes Orf8 Gene:43740577
1054 19064-19068 Gene denotes orf8 Gene:43740577
1055 18998-19002 Gene denotes orf8 Gene:43740577
1056 19729-19731 Gene denotes of Gene:6688
1057 19676-19678 Gene denotes of Gene:6688
1058 19090-19092 Gene denotes of Gene:6688
1059 19061-19063 Gene denotes of Gene:6688
1060 18995-18997 Gene denotes of Gene:6688
1061 19093-19102 Species denotes 2019-nCoV Tax:2697049
1062 19144-19169 Species denotes bat SARS-like coronavirus Tax:1508227
1063 19284-19300 Species denotes SARS coronavirus Tax:694009
1064 19179-19182 Gene denotes bat Gene:570
1065 19133-19141 CellLine denotes MN975262 CVCL:U508
1159 17357-17360 Gene denotes the Gene:25085
1160 17634-17638 Gene denotes orf8 Gene:43740577
1161 18434-18437 Gene denotes bat Gene:570
1162 18429-18432 Gene denotes bat Gene:570
1163 18218-18221 Gene denotes bat Gene:570
1164 18067-18070 Gene denotes bat Gene:570
1165 18005-18008 Gene denotes bat Gene:570
1166 17940-17943 Gene denotes bat Gene:570
1167 17890-17893 Gene denotes bat Gene:570
1168 17423-17426 Gene denotes bat Gene:570
1169 17308-17311 Gene denotes Bat Gene:570
1170 17286-17289 Gene denotes bat Gene:570
1171 16987-16990 Gene denotes bat Gene:570
1172 18110-18112 Gene denotes As Gene:112935892
1173 18309-18312 Gene denotes the Gene:25085
1174 18270-18273 Gene denotes the Gene:25085
1175 18186-18189 Gene denotes the Gene:25085
1176 18162-18165 Gene denotes the Gene:25085
1177 17983-17986 Gene denotes the Gene:25085
1178 17813-17816 Gene denotes the Gene:25085
1179 17766-17769 Gene denotes the Gene:25085
1180 17665-17668 Gene denotes the Gene:25085
1181 17630-17633 Gene denotes The Gene:25085
1182 17599-17602 Gene denotes the Gene:25085
1183 17510-17513 Gene denotes the Gene:25085
1184 17472-17475 Gene denotes the Gene:25085
1185 17456-17459 Gene denotes the Gene:25085
1186 17088-17091 Gene denotes the Gene:25085
1187 16859-16862 Gene denotes the Gene:25085
1188 18868-18870 Gene denotes to Gene:6999
1189 18653-18655 Gene denotes to Gene:6999
1190 18159-18161 Gene denotes to Gene:6999
1191 18026-18028 Gene denotes to Gene:6999
1192 17584-17586 Gene denotes to Gene:6999
1193 17507-17509 Gene denotes to Gene:6999
1194 18840-18844 Gene denotes orf8 Gene:43740577
1195 18767-18771 Gene denotes orf8 Gene:43740577
1196 18323-18327 Gene denotes orf8 Gene:43740577
1197 18288-18292 Gene denotes orf8 Gene:43740577
1198 18123-18127 Gene denotes orf8 Gene:43740577
1199 17934-17938 Gene denotes orf8 Gene:43740577
1200 17738-17742 Gene denotes orf8 Gene:43740577
1201 17603-17607 Gene denotes orf8 Gene:43740577
1202 17391-17395 Gene denotes orf8 Gene:43740577
1203 17116-17120 Gene denotes orf8 Gene:43740577
1204 17029-17033 Gene denotes orf8 Gene:43740577
1205 16821-16825 Gene denotes orf8 Gene:43740577
1206 18772-18774 Gene denotes of Gene:6688
1207 18480-18482 Gene denotes of Gene:6688
1208 18215-18217 Gene denotes of Gene:6688
1209 17113-17115 Gene denotes of Gene:6688
1210 16863-16878 Species denotes Betacoronavirus Tax:694002
1211 16889-16902 Species denotes coronaviruses Tax:11118
1212 16910-16919 Species denotes SARS-CoVs Tax:694009
1213 16946-16954 Species denotes patients Tax:9606
1214 16966-16975 Species denotes SARS-CoVs Tax:694009
1215 16991-17008 Species denotes SARS-related CoVs Tax:694009
1216 17174-17182 Species denotes SARS-CoV Tax:694009
1217 17218-17223 Species denotes human Tax:9606
1218 17224-17232 Species denotes patients Tax:9606
1219 17290-17306 Species denotes SARS-related-CoV Tax:694009
1220 17312-17315 Species denotes CoV Tax:11118
1221 17370-17378 Species denotes SARS-CoV Tax:694009
1222 17427-17443 Species denotes SARS-related-CoV Tax:694009
1223 17460-17468 Species denotes SARS-CoV Tax:694009
1224 17484-17489 Species denotes human Tax:9606
1225 17514-17523 Species denotes 2019-nCoV Tax:2697049
1226 17703-17711 Species denotes SARS-CoV Tax:694009
1227 17750-17758 Species denotes SARS-CoV Tax:694009
1228 17790-17798 Species denotes SARS-CoV Tax:694009
1229 17830-17835 Species denotes human Tax:9606
1230 17836-17844 Species denotes SARS-CoV Tax:694009
1231 17858-17866 Species denotes SARS-CoV Tax:694009
1232 17875-17883 Species denotes SARS-CoV Tax:694009
1233 17894-17910 Species denotes SARS-related-CoV Tax:694009
1234 17944-17947 Species denotes CoV Tax:11118
1235 17972-17981 Species denotes 2019-nCoV Tax:2697049
1236 18009-18025 Species denotes SARS-related-CoV Tax:694009
1237 18029-18038 Species denotes 2019-nCoV Tax:2697049
1238 18042-18045 Species denotes CoV Tax:11118
1239 18071-18087 Species denotes SARS-related-CoV Tax:694009
1240 18141-18150 Species denotes 2019-nCoV Tax:2697049
1241 18222-18238 Species denotes SARS-related-CoV Tax:694009
1242 18278-18287 Species denotes 2019-nCoV Tax:2697049
1243 18356-18364 Species denotes SARS-CoV Tax:694009
1244 18415-18423 Species denotes SARS-CoV Tax:694009
1245 18438-18441 Species denotes CoV Tax:11118
1246 18483-18492 Species denotes 2019-nCoV Tax:2697049
1247 18608-18616 Species denotes SARS-CoV Tax:694009
1248 18775-18784 Species denotes 2019-nCoV Tax:2697049
1249 17759-17763 Species denotes GZ02 Tax:256753
1250 18088-18092 Species denotes HKU3 Tax:290028
1251 18475-18479 Gene denotes orf8 Gene:43740577
1253 19938-19947 Species denotes 2019-nCoV Tax:2697049
1257 21639-21644 Gene denotes Spike Gene:43740568
1258 21460-21463 Gene denotes the Gene:25085
1259 21608-21610 Gene denotes of Gene:6688
1305 21376-21379 Gene denotes the Gene:25085
1306 21050-21053 Gene denotes bat Gene:570
1307 20995-20998 Gene denotes bat Gene:570
1308 20807-20810 Gene denotes bat Gene:570
1309 20418-20421 Gene denotes bat Gene:570
1310 20029-20032 Gene denotes bat Gene:570
1311 21370-21372 Gene denotes as Gene:112935892
1312 21337-21340 Gene denotes the Gene:25085
1313 21163-21166 Gene denotes the Gene:25085
1314 20822-20825 Gene denotes the Gene:25085
1315 20631-20634 Gene denotes the Gene:25085
1316 20414-20417 Gene denotes the Gene:25085
1317 20333-20336 Gene denotes the Gene:25085
1318 20242-20245 Gene denotes the Gene:25085
1319 20202-20205 Gene denotes the Gene:25085
1320 20161-20164 Gene denotes The Gene:25085
1321 19964-19967 Gene denotes The Gene:25085
1322 20628-20630 Gene denotes to Gene:6999
1323 20411-20413 Gene denotes to Gene:6999
1324 21385-21387 Gene denotes of Gene:6688
1325 20702-20704 Gene denotes of Gene:6688
1326 20227-20229 Gene denotes of Gene:6688
1327 19975-19977 Gene denotes of Gene:6688
1328 19978-19987 Species denotes 2019-nCoV Tax:2697049
1329 20033-20049 Species denotes SARS-related-CoV Tax:694009
1330 20095-20103 Species denotes SARS-CoV Tax:694009
1331 20135-20143 Species denotes SARS-CoV Tax:694009
1332 20337-20346 Species denotes 2019-nCoV Tax:2697049
1333 20422-20439 Species denotes SARS-related CoVs Tax:694009
1334 20472-20486 Species denotes horseshoe bats Tax:49442
1335 20596-20613 Species denotes novel coronavirus Tax:2697049
1336 20641-20656 Species denotes Betacoronavirus Tax:694002
1337 20713-20724 Species denotes coronavirus Tax:11118
1338 20727-20753 Species denotes SARS-related coronaviruses Tax:694009
1339 20877-20901 Species denotes SARS-related coronavirus Tax:694009
1340 20951-20959 Species denotes SARS-CoV Tax:694009
1341 20970-20986 Species denotes SARS coronavirus Tax:694009
1342 20999-21025 Species denotes SARS-related coronaviruses Tax:694009
1343 21167-21176 Species denotes 2019-nCoV Tax:2697049
1344 21309-21318 Species denotes 2019-nCoV Tax:2697049
1345 21406-21414 Species denotes SARS-CoV Tax:694009
1346 20797-20806 Species denotes horseshoe Tax:49442
1347 20115-20123 Chemical denotes AY278488
1348 20150-20158 Chemical denotes AY274119
1349 21297-21305 Disease denotes infected MESH:D007239
1370 23242-23244 Gene denotes to Gene:6999
1371 23417-23421 Gene denotes -UTR Gene:2837
1372 23074-23077 Gene denotes UTR Gene:2837
1373 23227-23229 Gene denotes as Gene:112935892
1374 23252-23255 Gene denotes the Gene:25085
1375 23193-23196 Gene denotes The Gene:25085
1376 23084-23087 Gene denotes the Gene:25085
1377 23034-23037 Gene denotes the Gene:25085
1378 23400-23404 Gene denotes -UTR Gene:2837
1379 23343-23347 Gene denotes -UTR Gene:2837
1380 23197-23201 Gene denotes SARS Gene:6301
1381 23214-23217 Gene denotes UTR Gene:2837
1382 23279-23287 Species denotes SARS-CoV Tax:694009
1383 23300-23309 Species denotes 2019-nCoV Tax:2697049
1384 23353-23361 Species denotes SARS-CoV Tax:694009
1385 23374-23383 Species denotes 2019-nCoV Tax:2697049
1386 23364-23368 Gene denotes -UTR Gene:2837
1387 23326-23330 Gene denotes -UTR Gene:2837
1388 23290-23294 Gene denotes -UTR Gene:2837
1389 23062-23065 Gene denotes UTR Gene:2837
1455 21804-21807 Gene denotes SL1 Gene:9014
1456 22239-22242 Gene denotes the Gene:25085
1457 22642-22645 Gene denotes bat Gene:570
1458 22486-22489 Gene denotes bat Gene:570
1459 22308-22311 Gene denotes Bat Gene:570
1460 22157-22160 Gene denotes bat Gene:570
1461 22021-22024 Gene denotes bat Gene:570
1462 22266-22268 Gene denotes as Gene:112935892
1463 21748-21750 Gene denotes As Gene:112935892
1464 22890-22893 Gene denotes The Gene:25085
1465 22777-22780 Gene denotes The Gene:25085
1466 22723-22726 Gene denotes the Gene:25085
1467 22670-22673 Gene denotes The Gene:25085
1468 22638-22641 Gene denotes the Gene:25085
1469 22572-22575 Gene denotes the Gene:25085
1470 22482-22485 Gene denotes The Gene:25085
1471 22347-22350 Gene denotes the Gene:25085
1472 22221-22224 Gene denotes The Gene:25085
1473 22184-22187 Gene denotes the Gene:25085
1474 22094-22097 Gene denotes the Gene:25085
1475 22070-22073 Gene denotes the Gene:25085
1476 22047-22050 Gene denotes the Gene:25085
1477 22017-22020 Gene denotes the Gene:25085
1478 21983-21986 Gene denotes the Gene:25085
1479 21904-21907 Gene denotes The Gene:25085
1480 21865-21868 Gene denotes The Gene:25085
1481 21775-21778 Gene denotes the Gene:25085
1482 22896-22900 Gene denotes -UTR Gene:2837
1483 22805-22809 Gene denotes -UTR Gene:2837
1484 22729-22733 Gene denotes -UTR Gene:2837
1485 22578-22582 Gene denotes -UTR Gene:2837
1486 22613-22615 Gene denotes to Gene:6999
1487 22141-22143 Gene denotes to Gene:6999
1488 21918-21921 Gene denotes SL3 Gene:4320
1489 21913-21916 Gene denotes SL2 Gene:4319
1490 21908-21911 Gene denotes SL1 Gene:9014
1491 21869-21872 Gene denotes SL3 Gene:4320
1492 21814-21817 Gene denotes SL3 Gene:4320
1493 21809-21812 Gene denotes SL2 Gene:4319
1494 22490-22494 Gene denotes SARS Gene:6301
1495 22025-22029 Gene denotes SARS Gene:6301
1496 22720-22722 Gene denotes of Gene:6688
1497 22707-22709 Gene denotes of Gene:6688
1498 22621-22623 Gene denotes of Gene:6688
1499 22583-22585 Gene denotes of Gene:6688
1500 22067-22069 Gene denotes of Gene:6688
1501 21779-21787 Species denotes SARS-CoV Tax:694009
1502 21987-21996 Species denotes 2019-nCoV Tax:2697049
1503 22004-22012 Species denotes SARS-CoV Tax:694009
1504 22051-22060 Species denotes 2019-nCoV Tax:2697049
1505 22144-22152 Species denotes SARS-CoV Tax:694009
1506 22161-22177 Species denotes SARS-related CoV Tax:694009
1507 22225-22234 Species denotes 2019-nCoV Tax:2697049
1508 22269-22277 Species denotes SARS-CoV Tax:694009
1509 22312-22328 Species denotes SARS-related CoV Tax:694009
1510 22351-22359 Species denotes SARS-COV Tax:694009
1511 22500-22503 Species denotes CoV Tax:11118
1512 22586-22595 Species denotes 2019-nCoV Tax:2697049
1513 22624-22632 Species denotes SARS-CoV Tax:694009
1514 22646-22662 Species denotes SARS-related CoV Tax:694009
1515 22781-22790 Species denotes 2019-nCoV Tax:2697049
1516 22921-22930 Species denotes 2019-nCoV Tax:2697049
1517 22938-22946 Species denotes SARS-CoV Tax:694009
1518 22951-22968 Species denotes SARS-related CoVs Tax:694009
1519 21790-21794 Gene denotes -UTR Gene:2837
1535 23501-23504 Gene denotes bat Gene:570
1536 23908-23911 Gene denotes the Gene:25085
1537 23820-23823 Gene denotes the Gene:25085
1538 23771-23774 Gene denotes the Gene:25085
1539 23697-23699 Gene denotes to Gene:6999
1540 23606-23608 Gene denotes to Gene:6999
1541 23498-23500 Gene denotes to Gene:6999
1542 23435-23444 Species denotes 2019-nCoV Tax:2697049
1543 23466-23481 Species denotes Betacoronavirus Tax:694002
1544 23505-23531 Species denotes SARS-related coronaviruses Tax:694009
1545 23862-23873 Species denotes coronavirus Tax:11118
1546 23896-23901 Species denotes human Tax:9606
1547 23950-23958 Species denotes SARS-CoV Tax:694009
1548 23963-23971 Species denotes MERS-CoV Tax:1335626
1549 23922-23930 Disease denotes zoonotic MESH:D015047

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T9 81-84 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T10 387-391 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T11 453-457 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T12 1063-1067 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920
T13 1564-1587 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T14 1729-1752 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T15 1879-1884 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T16 2786-2791 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T17 3002-3008 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T18 3074-3081 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T19 3223-3229 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T20 3353-3360 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T21 3529-3533 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920
T22 3728-3734 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T23 5335-5345 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T24 5365-5369 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T25 5406-5412 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T26 6035-6045 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T27 6444-6451 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T28 6500-6505 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T29 6525-6535 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T30 6576-6593 Body_part denotes neural networking http://purl.org/sig/ont/fma/fma74616
T31 7207-7213 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T32 7247-7250 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T33 7251-7257 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T34 7285-7296 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T35 7320-7331 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T36 7398-7404 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T37 7530-7536 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T38 7599-7607 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T39 7703-7707 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T40 7800-7806 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T41 7841-7847 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T42 7965-7973 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T43 8008-8016 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T44 8115-8123 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T45 8135-8143 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T46 8225-8231 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T47 8720-8726 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T48 8839-8850 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T49 8955-8965 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T50 9125-9131 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T51 9187-9195 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T52 9243-9251 Body_part denotes cysteine http://purl.org/sig/ont/fma/fma82751
T53 9363-9366 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T54 9377-9380 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T55 9894-9902 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T56 9975-9985 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T57 10127-10129 Body_part denotes PL http://purl.org/sig/ont/fma/fma273007
T58 10473-10476 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T59 10477-10480 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T60 10672-10675 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T61 10686-10689 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T62 10774-10778 Body_part denotes ExoN http://purl.org/sig/ont/fma/fma84120
T63 10981-10991 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T64 11085-11095 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T65 11512-11524 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T66 11794-11805 Body_part denotes cytoplasmic http://purl.org/sig/ont/fma/fma66835
T67 12409-12419 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T68 13163-13168 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T69 13169-13175 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T70 13205-13209 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T71 13212-13221 Body_part denotes intestine http://purl.org/sig/ont/fma/fma7199
T72 13283-13288 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T73 13506-13513 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T74 13582-13592 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T75 14017-14027 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T76 14063-14070 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T77 14102-14106 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T78 14191-14201 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T79 14814-14824 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T80 15135-15145 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T81 15279-15286 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T82 15353-15360 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T83 15522-15526 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T84 15681-15686 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T85 16077-16093 Body_part denotes terminal nucleus http://purl.org/sig/ont/fma/fma54529
T86 16318-16326 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T87 16411-16420 Body_part denotes protein's http://purl.org/sig/ont/fma/fma67257
T88 16560-16567 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T89 16684-16691 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T90 16791-16798 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T91 16842-16849 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T92 17054-17064 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T93 17608-17618 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T94 17639-17646 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T95 18198-18204 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T96 18572-18582 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T97 18878-18885 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T98 18900-18905 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T99 19026-19033 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T100 19069-19079 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T101 19683-19693 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T102 19825-19830 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T103 19968-19974 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T104 20004-20014 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T105 20206-20216 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T106 20248-20264 Body_part denotes structural genes http://purl.org/sig/ont/fma/fma74402
T107 20902-20909 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T108 21587-21597 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T109 21645-21657 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T110 21672-21679 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T111 21694-21701 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T112 21723-21726 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 723-728 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T3 1564-1587 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T4 1570-1587 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T5 1729-1752 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T6 1735-1752 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T7 1879-1884 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T8 2786-2791 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T9 5798-5803 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T10 6500-6505 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488
T11 8558-8563 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T12 13163-13168 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T13 13169-13175 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T14 13205-13209 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 13212-13221 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T16 14102-14106 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T17 18900-18905 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488
T18 19825-19830 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 1499-1521 Phenotype denotes respiratory infections http://purl.obolibrary.org/obo/HP_0011947
T4 1564-1598 Phenotype denotes lower respiratory tract infections http://purl.obolibrary.org/obo/HP_0002783
T5 1729-1762 Phenotype denotes lower respiratory tract infection http://purl.obolibrary.org/obo/HP_0002783
T6 1774-1794 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T7 1847-1855 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T8 1857-1868 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T9 2144-2153 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T10 2431-2440 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 2577-2582 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T12 2584-2591 Phenotype denotes malaise http://purl.obolibrary.org/obo/HP_0012378
T13 2593-2602 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T14 2608-2615 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T15 2750-2759 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p12744s11 15455-15464 CPA denotes replicate
p12770s30 18656-18663 PosReg denotes trigger
p12770s31 18664-18677 CPA denotes intracellular
p12770s35 18698-18707 PosReg denotes activates
p12770s37 18714-18727 MPA denotes inflammasomes

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T12 621-654 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T13 660-668 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 754-764 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T15 1095-1103 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 1374-1382 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 1493-1521 Disease denotes upper respiratory infections http://purl.obolibrary.org/obo/MONDO_0024355
T18 1570-1601 Disease denotes respiratory tract infections in http://purl.obolibrary.org/obo/MONDO_0024355
T19 1656-1664 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 1735-1762 Disease denotes respiratory tract infection http://purl.obolibrary.org/obo/MONDO_0024355
T21 1753-1762 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 1768-1803 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T23 1774-1803 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T24 1847-1855 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T25 1857-1868 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T26 2144-2153 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T27 2363-2372 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T28 2431-2440 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T29 2750-2759 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T30 2871-2890 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T31 2881-2890 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T32 3755-3763 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 3774-3778 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T34 3832-3840 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 3851-3855 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T36 3887-3891 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 3919-3923 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T38 3971-3979 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 3990-3994 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T40 4090-4094 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T41 4116-4120 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T42 4153-4157 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 4256-4260 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T44 4319-4323 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T45 4391-4395 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 4461-4465 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 4539-4543 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T48 4615-4619 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T49 4700-4704 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 5183-5187 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T51 7099-7107 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T52 8399-8407 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T53 9610-9618 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T54 9674-9682 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T55 11044-11048 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T56 11075-11083 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 11114-11123 Disease denotes nCoV 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T58 11155-11163 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T59 11634-11637 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T61 11931-11935 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T62 11980-11988 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T63 12254-12258 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T64 12279-12287 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 12726-12734 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T66 12870-12878 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T67 13039-13043 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T68 13143-13168 Disease denotes inflammation in the brain http://purl.obolibrary.org/obo/MONDO_0015144
T69 13143-13155 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T70 13661-13665 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T71 13797-13801 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T72 14270-14274 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T73 14497-14501 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T74 14594-14602 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T75 15330-15338 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T76 15342-15346 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T77 15415-15423 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T78 16007-16011 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T79 16117-16125 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T80 16187-16191 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T81 16483-16487 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T82 16734-16742 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T83 16747-16751 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T84 16910-16914 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T85 16966-16970 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T86 16991-16995 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T87 17174-17182 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T88 17290-17294 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T89 17370-17378 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T90 17427-17431 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T91 17460-17468 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T92 17703-17711 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T93 17750-17758 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T94 17790-17798 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T95 17836-17844 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T96 17858-17866 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T97 17875-17883 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T98 17894-17898 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T99 18009-18013 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T100 18071-18075 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T101 18222-18226 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T102 18356-18364 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T103 18415-18423 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T104 18608-18616 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T105 19148-19152 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T106 19284-19288 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T107 20033-20037 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T108 20095-20103 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T109 20135-20143 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T110 20422-20426 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T111 20727-20731 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T112 20877-20881 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T113 20951-20959 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T114 20970-20974 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T115 20999-21003 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T116 21406-21414 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 21779-21787 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T118 22004-22012 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T119 22025-22029 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T120 22144-22152 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 22161-22165 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T122 22269-22277 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T123 22312-22316 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T124 22351-22355 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T125 22490-22494 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T126 22624-22632 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T127 22646-22650 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T128 22869-22872 Disease denotes HVR http://purl.obolibrary.org/obo/MONDO_0008641
T129 22938-22946 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T130 22951-22955 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T131 23197-23201 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T132 23279-23287 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T133 23353-23361 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T134 23505-23509 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T135 23950-23958 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T25 85-92 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T26 362-366 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T27 387-391 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T28 453-457 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T29 572-577 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T30 715-716 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 839-842 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T32 850-851 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T33 949-956 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T34 985-989 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T35 1122-1127 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T36 1207-1213 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T37 1267-1272 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T38 1347-1348 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T39 1370-1371 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T40 1392-1393 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T41 1439-1440 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T42 1564-1587 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T43 1674-1675 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T44 1729-1752 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T45 1879-1884 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T46 1879-1884 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T47 1904-1909 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T48 2037-2039 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T49 2100-2112 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T50 2236-2243 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T51 2256-2257 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 2623-2625 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T53 2647-2648 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 2734-2736 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T55 2786-2791 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T56 2849-2850 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 2894-2895 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 2942-2944 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T59 2981-2982 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T60 3014-3015 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 3407-3415 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human or
T62 3502-3507 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T63 3509-3513 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T64 3557-3561 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T65 3749-3754 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T66 3826-3831 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T67 3965-3970 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T68 4026-4031 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T69 4046-4051 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T70 4159-4163 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T71 4606-4610 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T72 4645-4648 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T73 4660-4664 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T74 4691-4695 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T75 4730-4733 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T76 4746-4750 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T77 4776-4780 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T78 4814-4818 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T79 4844-4848 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T80 4883-4887 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T81 4909-4914 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T82 4951-4956 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T83 4971-4976 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T84 5008-5013 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T85 5028-5033 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T86 5237-5240 http://purl.obolibrary.org/obo/PR_000001807 denotes BGR
T87 5260-5265 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T88 5365-5369 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T89 5716-5720 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T90 6208-6213 http://purl.obolibrary.org/obo/CLO_0009640 denotes X [15
T91 7093-7098 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T92 7214-7226 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T93 7459-7460 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 7501-7502 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 7632-7640 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T96 7703-7707 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T97 7753-7754 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T98 7807-7819 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T99 7926-7927 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T100 8067-8075 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T101 8171-8175 http://purl.obolibrary.org/obo/CLO_0001313 denotes 3, 6
T102 8295-8296 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T103 8328-8333 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T104 8367-8368 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T105 8417-8418 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T106 8447-8450 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T107 8487-8490 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T108 8641-8642 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T109 8685-8686 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T110 9091-9092 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T111 9504-9509 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T112 9744-9746 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T113 9912-9913 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T114 10054-10056 http://purl.obolibrary.org/obo/CLO_0007448 denotes M1
T115 10054-10056 http://purl.obolibrary.org/obo/CLO_0050175 denotes M1
T116 10489-10497 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T117 10609-10616 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T118 10780-10784 http://purl.obolibrary.org/obo/CLO_0001000 denotes 3′–5
T119 10909-10914 http://purl.obolibrary.org/obo/CLO_0007888 denotes MT: 2
T120 11040-11043 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T121 11069-11074 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T122 11135-11138 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T123 11400-11408 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T124 11420-11422 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T125 11461-11463 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T126 11481-11483 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T127 11484-11486 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T128 11538-11540 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T129 11545-11547 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T130 11545-11547 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T131 11562-11564 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T132 11582-11583 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T133 11584-11590 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T134 11591-11598 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T135 11684-11686 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T136 11684-11686 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T137 11721-11728 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T138 11814-11816 http://purl.obolibrary.org/obo/PR_000005794 denotes CP
T139 11837-11839 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T140 11837-11839 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T141 11927-11930 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T142 11974-11979 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T143 12035-12043 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T144 12052-12054 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T145 12052-12054 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T146 12115-12122 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T147 12126-12132 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T148 12164-12166 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T149 12180-12182 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T150 12250-12253 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T151 12273-12278 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T152 12298-12299 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T153 12392-12393 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T154 12720-12725 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T155 12747-12750 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T156 12864-12869 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T157 12955-12960 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T158 12969-12970 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T159 13035-13038 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T160 13163-13168 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T161 13163-13168 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T162 13205-13209 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T163 13205-13209 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T164 13212-13221 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestine
T165 13212-13221 http://www.ebi.ac.uk/efo/EFO_0000834 denotes intestine
T166 13242-13249 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T167 13275-13288 http://purl.obolibrary.org/obo/CLO_0051719 denotes Vero E6 cells
T168 13369-13374 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T169 13539-13541 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T170 13539-13541 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T171 13579-13581 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T172 13579-13581 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T173 13657-13660 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T174 13692-13695 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T175 13712-13715 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T176 13791-13796 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T177 14084-14085 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T178 14102-14106 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T179 14102-14106 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T180 14107-14109 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T181 14115-14116 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T182 14118-14120 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T183 14188-14190 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T184 14266-14269 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T185 14301-14304 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T186 14318-14321 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T187 14335-14338 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T188 14356-14359 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T189 14380-14383 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T190 14491-14496 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T191 14871-14877 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T192 14878-14885 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T193 15015-15016 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T194 15256-15257 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T195 15505-15510 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T196 15522-15532 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T197 15627-15628 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T198 15660-15664 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero
T199 15660-15664 http://purl.obolibrary.org/obo/CLO_0050515 denotes Vero
T200 15676-15680 http://purl.obolibrary.org/obo/CLO_0050894 denotes 293T
T201 15676-15680 http://purl.obolibrary.org/obo/CLO_0051650 denotes 293T
T202 15676-15680 http://purl.obolibrary.org/obo/CLO_0052052 denotes 293T
T203 15681-15686 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T204 15704-15705 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T205 15933-15943 http://purl.obolibrary.org/obo/SO_0000418 denotes signalling
T206 16003-16006 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T207 16107-16113 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T208 16127-16129 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T209 16147-16155 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T210 16261-16271 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T211 16360-16370 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T212 16454-16455 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T213 16479-16482 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T214 16653-16654 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T215 16765-16766 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T216 16768-16769 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T217 16887-16888 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T218 16904-16909 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T219 16987-16990 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T220 17049-17050 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 17152-17155 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T222 17218-17223 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T223 17286-17289 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T224 17423-17426 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T225 17484-17489 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T226 17501-17506 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T227 17744-17749 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T228 17830-17835 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T229 17890-17893 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T230 17940-17943 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T231 18005-18008 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T232 18067-18070 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T233 18105-18106 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T234 18218-18221 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T235 18350-18355 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T236 18380-18387 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T237 18429-18432 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T238 18434-18437 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T239 18590-18593 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T240 18633-18634 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T241 18698-18707 http://purl.obolibrary.org/obo/CLO_0001658 denotes activates
T242 18795-18796 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T243 18845-18848 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T244 18849-18850 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T245 18876-18877 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T246 18922-18923 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T247 19036-19037 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T248 19144-19147 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T249 19179-19182 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T250 19199-19202 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T251 19278-19283 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T252 19478-19479 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T253 19988-19991 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T254 20029-20032 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T255 20089-20094 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T256 20129-20134 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T257 20236-20237 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T258 20259-20264 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T259 20303-20306 http://purl.obolibrary.org/obo/CLO_0051456 denotes A–E
T260 20326-20336 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes, the
T261 20374-20375 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T262 20418-20421 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T263 20482-20486 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T264 20807-20810 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T265 20858-20862 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T266 20945-20950 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T267 20961-20963 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T268 20995-20998 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T269 21050-21053 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T270 21085-21086 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T271 21125-21126 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T272 21209-21213 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T273 21285-21291 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T274 21612-21613 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T275 21636-21637 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T276 21685-21693 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T277 21769-21770 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T278 21814-21817 http://purl.obolibrary.org/obo/CLO_0053106 denotes SL3
T279 21824-21826 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T280 21869-21872 http://purl.obolibrary.org/obo/CLO_0053106 denotes SL3
T281 21899-21901 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T282 21918-21921 http://purl.obolibrary.org/obo/CLO_0053106 denotes SL3
T283 21928-21930 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T284 21998-22003 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T285 22021-22024 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T286 22074-22076 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T287 22104-22105 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T288 22157-22160 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T289 22188-22190 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T290 22218-22219 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T291 22486-22489 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T292 22642-22645 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T293 22666-22668 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T294 22837-22839 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T295 22841-22843 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T296 22841-22843 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T297 22857-22859 http://purl.obolibrary.org/obo/CLO_0007170 denotes L2
T298 22883-22886 http://purl.obolibrary.org/obo/CLO_0002755 denotes D–F
T299 22932-22937 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T300 22970-22972 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T301 23230-23231 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T302 23276-23277 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T303 23297-23298 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T304 23448-23449 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T305 23464-23465 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T306 23501-23504 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T307 23541-23544 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T308 23681-23687 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T309 23722-23728 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T310 23756-23762 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T311 23880-23883 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T312 23896-23901 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T12 4234-4236 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T13 4294-4296 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T14 4368-4370 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T15 4438-4440 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T16 4516-4518 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T17 4594-4596 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T18 4649-4651 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T19 4678-4680 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T20 4734-4736 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T21 5335-5345 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T22 5539-5543 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T23 6035-6045 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T24 6035-6040 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T25 6041-6045 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T26 6203-6207 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T27 6444-6451 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T28 6482-6486 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T29 6494-6499 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T30 6525-6535 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T31 6525-6530 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T32 6531-6535 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T33 7285-7296 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T34 7320-7331 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T35 7320-7325 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T36 7326-7331 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T37 7599-7607 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T38 7965-7973 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T39 8008-8016 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T40 8115-8123 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T41 8135-8143 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T42 8839-8850 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T43 8955-8965 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T44 9187-9195 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T45 9243-9251 Chemical denotes cysteine http://purl.obolibrary.org/obo/CHEBI_15356
T46 9894-9902 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T47 9975-9985 Chemical denotes Amino acid http://purl.obolibrary.org/obo/CHEBI_33704
T48 9981-9985 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T49 10030-10039 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T50 10054-10056 Chemical denotes M1 http://purl.obolibrary.org/obo/CHEBI_51079|http://purl.obolibrary.org/obo/CHEBI_139019|http://purl.obolibrary.org/obo/CHEBI_140152|http://purl.obolibrary.org/obo/CHEBI_34826
T54 10127-10129 Chemical denotes PL http://purl.obolibrary.org/obo/CHEBI_74791|http://purl.obolibrary.org/obo/CHEBI_81588
T56 10477-10480 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T57 10609-10616 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T58 10838-10845 Chemical denotes poly(U) http://purl.obolibrary.org/obo/CHEBI_73279
T59 10909-10911 Chemical denotes MT http://purl.obolibrary.org/obo/CHEBI_73614
T60 10918-10924 Chemical denotes ribose http://purl.obolibrary.org/obo/CHEBI_33942|http://purl.obolibrary.org/obo/CHEBI_47013
T62 10981-10991 Chemical denotes Amino acid http://purl.obolibrary.org/obo/CHEBI_33704
T63 10987-10991 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T64 11085-11095 Chemical denotes Amino acid http://purl.obolibrary.org/obo/CHEBI_33704
T65 11091-11095 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T66 11139-11141 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T67 11512-11524 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T68 11545-11547 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T69 11591-11598 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T70 11684-11686 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T71 11721-11728 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T72 11730-11732 Chemical denotes FP http://purl.obolibrary.org/obo/CHEBI_74750
T73 11785-11787 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T75 11814-11816 Chemical denotes CP http://purl.obolibrary.org/obo/CHEBI_3380|http://purl.obolibrary.org/obo/CHEBI_73461
T77 11837-11839 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T78 11947-11949 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T79 12025-12034 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T80 12035-12043 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T81 12052-12054 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T82 12409-12419 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T83 12409-12414 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T84 12415-12419 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T85 13506-13513 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T86 13539-13541 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T87 13579-13581 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T88 13582-13592 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T89 13582-13587 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T90 13588-13592 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T91 13696-13698 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T92 13716-13718 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T93 14017-14027 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T94 14017-14022 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T95 14023-14027 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T96 14063-14070 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T97 14191-14201 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T98 14191-14196 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T99 14197-14201 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T100 14305-14307 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T101 14322-14324 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T102 14339-14341 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T103 14360-14362 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T104 14384-14386 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T105 14814-14824 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T106 14814-14819 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T107 14820-14824 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T108 14878-14885 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T109 15135-15145 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T110 15135-15140 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T111 15141-15145 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T112 15279-15286 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T113 15353-15360 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T114 16086-16093 Chemical denotes nucleus http://purl.obolibrary.org/obo/CHEBI_33252
T115 16136-16146 Chemical denotes antagonist http://purl.obolibrary.org/obo/CHEBI_48706
T116 16230-16240 Chemical denotes antagonist http://purl.obolibrary.org/obo/CHEBI_48706
T117 16318-16326 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T118 16349-16359 Chemical denotes antagonist http://purl.obolibrary.org/obo/CHEBI_48706
T119 16560-16567 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T120 16684-16691 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T121 16791-16798 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T122 16842-16849 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T123 17054-17064 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T124 17608-17618 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T125 17608-17613 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T126 17614-17618 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T127 17639-17646 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T128 18039-18041 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T129 18166-18171 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T130 18572-18582 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T131 18572-18577 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T132 18578-18582 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T133 18878-18885 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T134 18894-18899 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T135 18924-18928 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T136 19026-19033 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T137 19069-19079 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T138 19069-19074 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T139 19075-19079 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T140 19183-19185 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T141 19203-19205 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T142 19683-19693 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T143 19683-19688 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T144 19689-19693 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T145 20004-20014 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T146 20050-20052 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T147 20206-20216 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T148 20206-20211 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T149 20212-20216 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T150 21509-21513 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T151 21587-21597 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T152 21587-21592 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T153 21593-21597 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T154 21622-21633 Chemical denotes polypeptide http://purl.obolibrary.org/obo/CHEBI_15841
T155 21645-21657 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T156 21672-21679 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T157 21694-21701 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T158 21824-21826 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T159 21928-21930 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T160 22074-22076 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T161 22188-22190 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T162 22841-22843 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T163 22845-22847 Chemical denotes S3 http://purl.obolibrary.org/obo/CHEBI_29388
T164 22849-22851 Chemical denotes S4 http://purl.obolibrary.org/obo/CHEBI_29401

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 8730-8743 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4 9467-9480 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5 10200-10209 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T6 10316-10325 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T7 12514-12539 http://purl.obolibrary.org/obo/GO_0051701 denotes interaction with the host
T8 12685-12697 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T9 13143-13155 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T10 15580-15597 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T11 15580-15597 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T12 15743-15751 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T13 15743-15751 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T14 15743-15751 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T15 15743-15751 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T16 15814-15822 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T17 15814-15822 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T18 15814-15822 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T19 15814-15822 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T20 15827-15836 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T21 15827-15836 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T22 15919-15928 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T23 15933-15943 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T24 16086-16106 http://purl.obolibrary.org/obo/GO_0051647 denotes nucleus localization
T25 16094-16106 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T26 16429-16441 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T27 16519-16531 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T28 22710-22719 http://purl.obolibrary.org/obo/GO_0016032 denotes virulence
T29 22710-22719 http://purl.obolibrary.org/obo/GO_0009405 denotes virulence
T30 23634-23651 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T31 23634-23651 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T32 23662-23674 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T18 0-12 Sentence denotes Introduction
T19 13-177 Sentence denotes Coronaviruses (CoVs) are enveloped, positive-sense, single-stranded RNA viruses that belong to the subfamily Coronavirinae, family Coronavirdiae, order Nidovirales.
T20 178-323 Sentence denotes There are four genera of CoVs, namely, Alphacoronavirus (αCoV), Betacoronavirus (βCoV), Deltacoronavirus (δCoV), and Gammacoronavirus (γCoV) [1].
T21 324-490 Sentence denotes Evolutionary analyses have shown that bats and rodents are the gene sources of most αCoVs and βCoVs, while avian species are the gene sources of most δCoVs and γCoVs.
T22 491-588 Sentence denotes CoVs have repeatedly crossed species barriers and some have emerged as important human pathogens.
T23 589-914 Sentence denotes The best-known examples include severe acute respiratory syndrome CoV (SARS-CoV) which emerged in China in 2002–2003 to cause a large-scale epidemic with about 8000 infections and 800 deaths, and Middle East respiratory syndrome CoV (MERS-CoV) which has caused a persistent epidemic in the Arabian Peninsula since 2012 [2,3].
T24 915-1214 Sentence denotes In both of these epidemics, these viruses have likely originated from bats and then jumped into another amplification mammalian host [the Himalayan palm civet (Paguma larvata) for SARS-CoV and the dromedary camel (Camelus dromedarius) for MERS-CoV] before crossing species barriers to infect humans.
T25 1215-1421 Sentence denotes Prior to December 2019, 6 CoVs were known to infect human, including 2 αCoV (HCoV-229E and HKU-NL63) and 4 βCoV (HCoV-OC43 [lineage A], HCoV-HKU1 [lineage A], SARS-CoV [lineage B] and MERS-CoV [lineage C]).
T26 1422-1642 Sentence denotes The βCoV lineage A HCoV-OC43 and HCoV-HKU1 usually cause self-limiting upper respiratory infections in immunocompetent hosts and occasionally lower respiratory tract infections in immunocompromised hosts and elderly [4].
T27 1643-2061 Sentence denotes In contrast, SARS-CoV (lineage B βCoV) and MERS-CoV (lineage C βCoV) may cause severe lower respiratory tract infection with acute respiratory distress syndrome and extrapulmonary manifestations, such as diarrhea, lymphopenia, deranged liver and renal function tests, and multiorgan dysfunction syndrome, among both immunocompetent and immunocompromised hosts with mortality rates of ∼10% and ∼35%, respectively [5,6].
T28 2062-2212 Sentence denotes On 31 December 2019, the World Health Organization (WHO) was informed of cases of pneumonia of unknown cause in Wuhan City, Hubei Province, China [7].
T29 2213-2299 Sentence denotes Subsequent virological testing showed that a novel CoV was detected in these patients.
T30 2300-2469 Sentence denotes As of 16 January 2020, 43 patients have been diagnosed to have infection with this novel CoV, including two exported cases of mild pneumonia in Thailand and Japan [8,9].
T31 2470-2530 Sentence denotes The earliest date of symptom onset was 1 December 2019 [10].
T32 2531-2616 Sentence denotes The symptomatology of these patients included fever, malaise, dry cough, and dyspnea.
T33 2617-2729 Sentence denotes Among 41 patients admitted to a designated hospital in Wuhan, 13 (32%) required intensive care and 6 (15%) died.
T34 2730-2827 Sentence denotes All 41 patients had pneumonia with abnormal findings on chest computerized tomography scans [10].
T35 2828-2946 Sentence denotes We recently reported a familial cluster of 2019-nCoV infection in a Shenzhen family with travel history to Wuhan [11].
T36 2947-3169 Sentence denotes In the present study, we analyzed a 2019-nCoV complete genome from a patient in this familial cluster and compared it with the genomes of related β CoVs to provide insights into the potential source and control strategies.
T37 3171-3192 Sentence denotes Materials and methods
T38 3194-3209 Sentence denotes Viral sequences
T39 3210-3303 Sentence denotes The complete genome sequence of 2019-nCoV HKU-SZ-005b was available at GenBank (accession no.
T40 3304-3324 Sentence denotes MN975262) (Table 1).
T41 3325-3463 Sentence denotes The representative complete genomes of other related βCoVs strains collected from human or mammals were included for comparative analysis.
T42 3464-3612 Sentence denotes These included strains collected from human, bats, and Himalayan palm civet between 2003 and 2018, with one 229E coronavirus strain as the outgroup.
T43 3613-3621 Sentence denotes Table 1.
T44 3622-3663 Sentence denotes List of coronaviruses used in this study.
T45 3664-3739 Sentence denotes Accession number Name displayed on the tree Name of full-length genome Year
T46 3740-3816 Sentence denotes AY274119 Human SARS-CoV Tor2 2003 SARS-related coronavirus isolate Tor2 2003
T47 3817-3877 Sentence denotes AY278488 Human SARS-CoV BJ01 2003 SARS coronavirus BJ01 2003
T48 3878-3955 Sentence denotes AY278491 SARS coronavirus HKU-39849 2003 SARS coronavirus HKU-39849 2003 2003
T49 3956-4016 Sentence denotes AY390556 Human SARS-CoV GZ02 2003 SARS coronavirus GZ02 2003
T50 4017-4073 Sentence denotes AY391777 Human CoV OC43 2003 Human coronavirus OC43 2003
T51 4074-4163 Sentence denotes AY515512 Paguma SARS CoV HC/SZ/61/03 2003 SARS coronavirus HC/SZ/61/03 (paguma SARS) 2018
T52 4164-4220 Sentence denotes EF065513 Bat CoV HKU9-1 2006 Bat coronavirus HKU9-1 2006
T53 4221-4280 Sentence denotes FJ588686 Bat SL-CoV Rs672 2006 Bat SARS CoV Rs672/2006 2006
T54 4281-4354 Sentence denotes KC881005 Bat SL-CoV RsSHC014 2013 Bat SARS-like coronavirus RsSHC014 2013
T55 4355-4424 Sentence denotes KC881006 Bat SL-CoV Rs3367 2013 Bat SARS-like coronavirus Rs3367 2013
T56 4425-4502 Sentence denotes KY417146 Bat SL-CoV Rs4231 2016 Bat SARS-like coronavirus isolate Rs4231 2016
T57 4503-4580 Sentence denotes KY417149 Bat SL-CoV Rs4255 2016 Bat SARS-like coronavirus isolate Rs4255 2016
T58 4581-4664 Sentence denotes MG772933 Bat SL-CoV ZC45 2018 Bat SARS-like coronavirus isolate bat-SL-CoVZC45 2018
T59 4665-4750 Sentence denotes MG772934 Bat SL-CoV ZXC21 2018 Bat SARS-like coronavirus isolate bat-SL-CoVZXC21 2018
T60 4751-4818 Sentence denotes MK211377 Bat CoV YN2018C 2018 Coronavirus BtRs-BetaCoV/YN2018C 2018
T61 4819-4887 Sentence denotes MK211378 Bat CoV YN2018D 2018 Coronavirus BtRs-BetaCoV/YN2018Da 2018
T62 4888-4941 Sentence denotes MN975262 HKU-SZ-005b Human 2019-nCoV HKU-SZ-005b 2020
T63 4942-4998 Sentence denotes NC002645 Human CoV 229E 2000 Human coronavirus 229E 2000
T64 4999-5055 Sentence denotes NC006577 Human CoV HKU1 2004 Human coronavirus HKU1 2004
T65 5056-5112 Sentence denotes NC009019 Bat CoV HKU4-1 2006 Bat coronavirus HKU4-1 2006
T66 5113-5169 Sentence denotes NC009020 Bat CoV HKU5-1 2006 Bat coronavirus HKU5-1 2006
T67 5170-5250 Sentence denotes NC014470 Bat SARS-related CoV BM48-31 2009 Bat coronavirus BM48-31/BGR/2008 2008
T68 5251-5329 Sentence denotes NC019843 Human MERS-CoV 2012 Middle East respiratory syndrome coronavirus 2012
T69 5330-5404 Sentence denotes aOne nucleotide was added within M gene to maintain the sequence in-frame.
T70 5406-5455 Sentence denotes Genome characterization and phylogenetic analysis
T71 5456-5616 Sentence denotes Phylogenetic tree construction by the neighbour joining method was performed using MEGA X software, with bootstrap values being calculated from 1000 trees [12].
T72 5617-5775 Sentence denotes The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) was shown next to the branches [13].
T73 5776-5918 Sentence denotes The tree was drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree.
T74 5919-6074 Sentence denotes The evolutionary distances were computed using the Poisson correction method and were in the units of the number of amino acid substitutions per site [14].
T75 6075-6162 Sentence denotes All ambiguous positions were removed for each sequence pair (pairwise deletion option).
T76 6163-6215 Sentence denotes Evolutionary analyses were conducted in MEGA X [15].
T77 6216-6310 Sentence denotes Multiple alignment was performed using CLUSTAL 2.1 and further visualized using BOXSHADE 3.21.
T78 6311-6421 Sentence denotes Structural analysis of orf8 was performed using PSI-blast-based secondary structure PREDiction (PSIPRED) [16].
T79 6422-6616 Sentence denotes For the prediction of protein secondary structure including beta sheet, alpha helix, and coil, initial amino acid sequences were input and analysed using neural networking and its own algorithm.
T80 6617-6696 Sentence denotes Predicted structures were visualized and highlighted on the BOXSHADE alignment.
T81 6697-6814 Sentence denotes Prediction of transmembrane domains was performed using the TMHMM 2.0 server (http://www.cbs.dtu.dk/services/TMHMM/).
T82 6815-7088 Sentence denotes Secondary structure prediction in the 5′-untranslated region (UTR) and 3′-UTR was performed using the RNAfold WebServer (http://rna.tbi.univie.ac.at/cgi-bin/RNAWebSuite/RNAfold.cgi) with minimum free energy (MFE) and partition function in Fold algorithms and basic options.
T83 7089-7181 Sentence denotes The human SARS-CoV 5′- and 3′- UTR were used as references to adjust the prediction results.
T84 7183-7205 Sentence denotes Results and discussion
T85 7207-7226 Sentence denotes Genome organization
T86 7227-7332 Sentence denotes The single-stranded RNA genome of the 2019-nCoV was 29891 nucleotides in size, encoding 9860 amino acids.
T87 7333-7359 Sentence denotes The G + C content was 38%.
T88 7360-7515 Sentence denotes Similar to other βCoVs, the 2019-nCoV genome contains two flanking untranslated regions (UTRs) and a single long open reading frame encoding a polyprotein.
T89 7516-7773 Sentence denotes The 2019-nCoV genome is arranged in the order of 5′-replicase (orf1/ab)-structural proteins [Spike (S)-Envelope (E)-Membrane (M)-Nucleocapsid (N)]−3′ and lacks the hemagglutinin-esterase gene which is characteristically found in lineage A β-CoVs (Figure 1).
T90 7774-7783 Sentence denotes Figure 1.
T91 7784-7820 Sentence denotes Betacoronavirus genome organization.
T92 7821-8273 Sentence denotes The betacoronavirus genome comprises of the 5'-untranslated region (5'-UTR), open reading frame (orf) 1a/b (yellow box) encoding non-structural proteins (nsp) for replication, structural proteins including spike (blue box), envelop (orange box), membrane (red box), and nucleocapsid (cyan box) proteins, accessory proteins (purple boxes) such as orf 3, 6, 7a, 7b, 8 and 9b in the 2019-nCoV (HKU-SZ-005b) genome, and the 3'-untranslated region (3'-UTR).
T93 8274-8512 Sentence denotes Examples of lineages A to D betacoronaviruses include human coronavirus (HCoV) HKU1 (lineage A), 2019-nCoV (HKU-SZ-005b) and SARS-CoV (lineage B), MERS-CoV and Tylonycteris bat CoV HKU4 (lineage C), and Rousettus bat CoV HKU9 (lineage D).
T94 8513-8564 Sentence denotes The length of nsps and orfs are not drawn in scale.
T95 8565-8802 Sentence denotes There are 12 putative, functional open reading frames (orfs) expressed from a nested set of 9 subgenomic mRNAs carrying a conserved leader sequence in the genome, 9 transcription-regulatory sequences, and 2 terminal untranslated regions.
T96 8803-8870 Sentence denotes The 5′- and 3′-UTRs are 265 and 358 nucleotides long, respectively.
T97 8871-8987 Sentence denotes The 5′- and 3 ′-UTR sequences of 2019-nCoV are similar to those of other βCoVs with nucleotide identities of ⩾83.6%.
T98 8988-9203 Sentence denotes The large replicase polyproteins pp1a and pp1ab encoded by the partially overlapping 5′-terminal orf1a/b within the 5′ two-thirds of the genome is proteolytic cleaved into 16 putative non-structural proteins (nsps).
T99 9204-9520 Sentence denotes These putative nsps included two viral cysteine proteases, namely, nsp3 (papain-like protease) and nsp5 (chymotrypsin-like, 3C-like, or main protease), nsp12 (RNA-dependent RNA polymerase [RdRp]), nsp13 (helicase), and other nsps which are likely involved in the transcription and replication of the virus (Table 2).
T100 9521-9629 Sentence denotes There are no remarkable differences between the orfs and nsps of 2019-nCoV with those of SARS-CoV (Table 3).
T101 9630-9814 Sentence denotes The major distinction between SARSr-CoV and SARS-CoV is in orf3b, Spike and orf8 but especially variable in Spike S1 and orf8 which were previously shown to be recombination hot spots.
T102 9815-9823 Sentence denotes Table 2.
T103 9824-9945 Sentence denotes Putative functions and proteolytic cleavage sites of 16 nonstructural proteins in orf1a/b as predicted by bioinformatics.
T104 9946-10015 Sentence denotes NSP Putative function/domain Amino acid position Putative cleave site
T105 10016-10075 Sentence denotes nsp1 suppress antiviral host response M1 – G180 (LNGG'AYTR)
T106 10076-10112 Sentence denotes nsp2 unknown A181 – G818 (LKGG'APTK)
T107 10113-10165 Sentence denotes nsp3 putative PL-pro domain A819 – G2763 (LKGG'KIVN)
T108 10166-10235 Sentence denotes nsp4 complex with nsp3 and 6: DMV formation K2764 – Q3263 (AVLQ'SGFR)
T109 10236-10281 Sentence denotes nsp5 3CL-pro domain S3264 – Q3569 (VTFQ'SAVK)
T110 10282-10351 Sentence denotes nsp6 complex with nsp3 and 4: DMV formation S3570 – Q3859 (ATVQ'SKMS)
T111 10352-10409 Sentence denotes nsp7 complex with nsp8: primase S3860 – Q3942 (ATLQ'AIAS)
T112 10410-10467 Sentence denotes nsp8 complex with nsp7: primase A3943 – Q4140 (VKLQ'NNEL)
T113 10468-10523 Sentence denotes nsp9 RNA/DNA binding activity N4141 – Q4253 (VRLQ'AGNA)
T114 10524-10596 Sentence denotes nsp10 complex with nsp14: replication fidelity A4254 – Q4392 (PMLQ'SADA)
T115 10597-10665 Sentence denotes nsp11 short peptide at the end of orf1a S4393 – V4405 (end of orf1a)
T116 10666-10726 Sentence denotes nsp12 RNA-dependent RNA polymerase S4393 – Q5324 (TVLQ'AVGA)
T117 10727-10767 Sentence denotes nsp13 helicase A5325 – Q5925 (ATLQ'AENV)
T118 10768-10779 Sentence denotes nsp14 ExoN:
T119 10780-10823 Sentence denotes 3′–5′ exonuclease A5926 – Q6452 (TRLQ'SLEN)
T120 10824-10897 Sentence denotes nsp15 XendoU: poly(U)-specific endoribonuclease S6453 – Q6798 (PKLQ'SSQA)
T121 10898-10912 Sentence denotes nsp16 2'-O-MT:
T122 10913-10971 Sentence denotes 2'-O-ribose methyltransferase S6799 – N7096 (end of orf1b)
T123 10972-10980 Sentence denotes Table 3.
T124 10981-11084 Sentence denotes Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.
T125 11085-11128 Sentence denotes Amino acid identity (%) 2019-nCoV 2019-nCoV
T126 11129-11163 Sentence denotes   vs. bat-SL-CoVZXC21 vs. SARS-CoV
T127 11164-11174 Sentence denotes NSP1 96 84
T128 11175-11185 Sentence denotes NSP2 96 68
T129 11186-11196 Sentence denotes NSP3 93 76
T130 11197-11207 Sentence denotes NSP4 96 80
T131 11208-11218 Sentence denotes NSP5 99 96
T132 11219-11229 Sentence denotes NSP6 98 88
T133 11230-11240 Sentence denotes NSP7 99 99
T134 11241-11251 Sentence denotes NSP8 96 97
T135 11252-11262 Sentence denotes NSP9 96 97
T136 11263-11274 Sentence denotes NSP10 98 97
T137 11275-11286 Sentence denotes NSP11 85 85
T138 11287-11298 Sentence denotes NSP12 96 96
T139 11299-11311 Sentence denotes NSP13 99 100
T140 11312-11323 Sentence denotes NSP14 95 95
T141 11324-11335 Sentence denotes NSP15 88 89
T142 11336-11347 Sentence denotes NSP16 98 93
T143 11348-11359 Sentence denotes Spike 80 76
T144 11360-11371 Sentence denotes Orf3a 92 72
T145 11372-11383 Sentence denotes Orf3b 32 32
T146 11384-11399 Sentence denotes Envelope 100 95
T147 11400-11414 Sentence denotes Membrane 99 91
T148 11415-11425 Sentence denotes Orf6 94 69
T149 11426-11437 Sentence denotes Orf7a 89 85
T150 11438-11449 Sentence denotes Orf7b 93 81
T151 11450-11466 Sentence denotes Orf8/Orf8b 94 40
T152 11467-11486 Sentence denotes Nucleoprotein 94 94
T153 11487-11498 Sentence denotes Orf9b 73 73
T154 11500-11505 Sentence denotes Spike
T155 11506-11557 Sentence denotes Spike glycoprotein comprised of S1 and S2 subunits.
T156 11558-11818 Sentence denotes The S1 subunit contains a signal peptide, followed by an N-terminal domain (NTD) and receptor-binding domain (RBD), while the S2 subunit contains conserved fusion peptide (FP), heptad repeat (HR) 1 and 2, transmembrane domain (TM), and cytoplasmic domain (CP).
T157 11819-12000 Sentence denotes We found that the S2 subunit of 2019-nCoV is highly conserved and shares 99% identity with those of the two bat SARS-like CoVs (SL-CoV ZXC21 and ZC45) and human SARS-CoV (Figure 2).
T158 12001-12168 Sentence denotes Thus the broad spectrum antiviral peptides against S2 would be an important preventive and treatment modality for testing in animal models before clinical trials [18].
T159 12169-12396 Sentence denotes Though the S1 subunit of 2019-nCoV shares around 70% identity to that of the two bat SARS-like CoVs and human SARS-CoV (Figure 3(A)), the core domain of RBD (excluding the external subdomain) are highly conserved (Figure 3(B)).
T160 12397-12549 Sentence denotes Most of the amino acid differences of RBD are located in the external subdomain, which is responsible for the direct interaction with the host receptor.
T161 12550-12698 Sentence denotes Further investigation of this soluble variable external subdomain region will reveal its receptor usage, interspecies transmission and pathogenesis.
T162 12699-12879 Sentence denotes Unlike 2019-nCoV and human SARS-CoV, most known bat SARSr-CoVs have two stretches of deletions in the spike receptor binding domain (RBD) when compared with that of human SARS-CoV.
T163 12880-12995 Sentence denotes But some Yunnan strains such as the WIV1 had no such deletions and can use human ACE2 as a cellular entry receptor.
T164 12996-13222 Sentence denotes It is interesting to note that the two bat SARS-related coronavirus ZXC21 and ZC45, being closest to 2019-nCoV, can infect suckling rats and cause inflammation in the brain tissue, and pathological changes in lung & intestine.
T165 13223-13323 Sentence denotes However, these two viruses could not be isolated in Vero E6 cells and were not investigated further.
T166 13324-13481 Sentence denotes The two retained deletion sites in the Spike genes of ZXC21 and ZC45 may lessen their likelihood of jumping species barriers imposed by receptor specificity.
T167 13482-13491 Sentence denotes Figure 2.
T168 13492-13550 Sentence denotes Comparison of protein sequences of Spike stalk S2 subunit.
T169 13551-13919 Sentence denotes Multiple alignment of Spike S2 amino acid sequences of 2019-nCoV HKU-SZ-005b (accession number MN975262), bat SARS-like coronavirus isolates bat-SL-CoVZXC21 and bat-SL-CoVZXC45 (accession number MG772934.1 and MG772933.1, respectively) and human SARS coronavirus (accession number NC004718) was performed and displayed using CLUSTAL 2.1 and BOXSHADE 3.21 respectively.
T170 13920-14038 Sentence denotes The black boxes represent the identity while the grey boxes represent the similarity of the four amino acid sequences.
T171 14039-14048 Sentence denotes Figure 3.
T172 14049-14086 Sentence denotes Comparison of protein sequences of A.
T173 14087-14117 Sentence denotes Spike globular head S1, and B.
T174 14118-14159 Sentence denotes S1 receptor-binding domain (RBD) subunit.
T175 14160-14709 Sentence denotes Multiple alignment of Spike S1 amino acid sequences of 2019-nCoV HKU-SZ-005b (accession number MN975262), bat SARS-like coronavirus isolates bat-SL-CoVZXC21, bat-SL-CoVZXC45, bat-SL-CoV-YNLF_31C, bat-SL-CoV-YNLF_34C and bat SL-CoV HKU3-1 (accession number MG772934.1 and MG772933.1, KP886808, KP886809 and DQ022305, respectively), human SARS coronavirus GZ02 and Tor2 (accession number AY390556 and AY274119, respectively) and Paguma SARS-CoV (accession number AY515512) was performed and displayed using CLUSTAL 2.1 and BOXSHADE 3.21, respectively.
T176 14710-14835 Sentence denotes The black background represents the identity while the grey background represents the similarity of the amino acid sequences.
T177 14836-14980 Sentence denotes Orange box indicates the region of signal peptide, while green and blue boxes indicate the core domain and receptor binding domain respectively.
T178 14981-15043 Sentence denotes Sequences of RBD, highlighted in (A) were used for comparison.
T179 15044-15196 Sentence denotes External subdomain variable region of 2019-nCoV HKU-SZ-005b was predicted by comparison of amino acid similarity and published structural analysis [17].
T180 15197-15248 Sentence denotes Purple box indicates the external subdomain region.
T181 15250-15255 Sentence denotes Orf3b
T182 15256-15395 Sentence denotes A novel short putative protein with 4 helices and no homology to existing SARS-CoV or SARS-r-CoV protein was found within Orf3b (Figure 4).
T183 15396-15607 Sentence denotes It is notable that SARS-CoV deletion mutants lacking orf3b replicate to levels similar to those of wild-type virus in several cell types [19], suggesting that orf3b is dispensable for viral replication in vitro.
T184 15608-15863 Sentence denotes But orf3b may have a role in viral pathogenicity as Vero E6 but not 293T cells transfected with a construct expressing Orf3b underwent necrosis as early as 6 h after transfection and underwent simultaneous necrosis and apoptosis at later time points [20].
T185 15864-15949 Sentence denotes Orf3b was also shown to inhibit expression of IFN-β at synthesis and signalling [21].
T186 15950-16131 Sentence denotes Subsequently, orf3b homologues identified from three bat SARS-related-CoV strains were C-terminally truncated and lacked the C-terminal nucleus localization signal of SARS-CoV [22].
T187 16132-16272 Sentence denotes IFN antagonist activity analysis demonstrated that one SARS-related-CoV orf3b still possessed IFN antagonist and IRF3-modulating activities.
T188 16273-16532 Sentence denotes These results indicated that different orf3b proteins display different IFN antagonist activities and this function is independent of the protein's nuclear localization, suggesting a potential link between bat SARS-related-CoV orf3b function and pathogenesis.
T189 16533-16623 Sentence denotes The importance of this new protein in 2019-nCoV will require further validation and study.
T190 16624-16633 Sentence denotes Figure 4.
T191 16634-16652 Sentence denotes Analysis of orf3b.
T192 16653-16655 Sentence denotes A.
T193 16656-16764 Sentence denotes Multiple alignment of orf3b protein sequence between 2019-nCoV (HKU-SZ-005b), SARS-CoV and SARS-related CoV.
T194 16765-16767 Sentence denotes B.
T195 16768-16814 Sentence denotes A novel putative short protein found in orf3b.
T196 16816-16820 Sentence denotes Orf8
T197 16821-16903 Sentence denotes orf8 is an accessory protein found in the Betacoronavirus lineage B coronaviruses.
T198 16904-17039 Sentence denotes Human SARS-CoVs isolated from early-phase patients, all civet SARS-CoVs, and other bat SARS-related CoVs contain full-length orf8 [23].
T199 17040-17238 Sentence denotes However, a 29-nucleotide deletion, which causes the split of full length of orf8 into putative orf8a and orf8b, has been found in all SARS-CoV isolated from mid- and late- phase human patients [24].
T200 17239-17449 Sentence denotes In addition, we have previously identified two bat SARS-related-CoV (Bat-CoV YNLF_31C and YNLF_34C) and proposed that the original SARS-CoV full-length orf8 is acquired from these two bat SARS-related-CoV [25].
T201 17450-17629 Sentence denotes Since the SARS-CoV is the closest human pathogenic virus to the 2019-nCoV, we performed phylogenetic analysis and multiple alignments to investigate the orf8 amino acid sequences.
T202 17630-18109 Sentence denotes The orf8 protein sequences used in the analysis derived from early phase SARS-CoV that includes full-length orf8 (human SARS-CoV GZ02), the mid- and late-phase SARS-CoV that includes the split orf8b (human SARS-CoV Tor2), civet SARS-CoV (paguma SARS-CoV), two bat SARS-related-CoV containing full-length orf8 (bat-CoV YNLF_31C and YNLF_34C), 2019-nCoV, the other two closest bat SARS-related-CoV to 2019-nCoV SL-CoV ZXC21 and ZC45), and bat SARS-related-CoV HKU3-1 (Figure 5(A)).
T203 18110-18254 Sentence denotes As expected, orf8 derived from 2019-nCoV belongs to the group that includes the closest genome sequences of bat SARS-related-CoV ZXC21 and ZC45.
T204 18255-18465 Sentence denotes Interestingly, the new 2019-nCoV orf8 is distant from the conserved orf8 or orf8b derived from human SARS-CoV or its related viruses derived from civet (paguma SARS-CoV) and bat (bat-CoV YNLF_31C and YNLF_34C).
T205 18466-18543 Sentence denotes This new orf8 of 2019-nCoV does not contain known functional domain or motif.
T206 18544-18785 Sentence denotes An aggregation motif VLVVL (amino acid 75–79) has been found in SARS-CoV orf8b (Figure 5(B)) which was shown to trigger intracellular stress pathways and activates NLRP3 inflammasomes [26], but this is absent in this novel orf8 of 2019-nCoV.
T207 18786-18975 Sentence denotes Based on a secondary structure prediction, this novel orf8 has a high possibility to form a protein with an alpha-helix, following with a beta-sheet(s) containing six strands (Figure 5(C)).
T208 18976-18985 Sentence denotes Figure 5.
T209 18986-19398 Sentence denotes Analysis of orf8 to show novel putative protein. (A) Phylogenetic analysis of orf8 amino acid sequences of 2019-nCoV HKU-SZ-005b (accession number MN975262), bat SARS-like coronavirus isolates bat-SL-CoVZXC21 and bat-SL-CoVZXC45 (accession number MG772934.1 and MG772933.1, respectively) and human SARS coronavirus (accession number AY274119) was performed using the neighbour-joining method with bootstrap 1000.
T210 19399-19578 Sentence denotes The evolutionary distances were calculated using the JTT matrix-based method. (B) Multiple alignment was performed and displayed using CLUSTAL 2.1 and BOXSHADE 3.21, respectively.
T211 19579-19814 Sentence denotes The black background represents the identity while the grey background represents the similarity of the amino acid sequences. (C) Structural analysis of Orf8 was performed using PSI-blast-based secondary structure PREDiction (PSIPRED).
T212 19815-19904 Sentence denotes Predicted helix structure (h) and strand (s) were boxed with red and yellow respectively.
T213 19906-19963 Sentence denotes Phylogenetic relationship among 2019-nCoV and other βCoVs
T214 19964-20160 Sentence denotes The genome of 2019-nCoV has overall 89% nucleotide identity with bat SARS-related-CoV SL-CoVZXC21 (MG772934.1), and 82% with human SARS-CoV BJ01 2003 (AY278488) and human SARS-CoV Tor2 (AY274119).
T215 20161-20309 Sentence denotes The phylogenetic trees constructed using the amino acid sequences of orf1a/b and the 4 structural genes (S, E, M, and N) were shown (Figure 6(A–E)).
T216 20310-20382 Sentence denotes For all these 5 genes, the 2019-nCoV was clustered with lineage B βCoVs.
T217 20383-20585 Sentence denotes It was most closely related to the bat SARS-related CoVs ZXC21 and ZC45 found in Chinese horseshoe bats (Rhinolopus sinicus) collected from Zhoushan city, Zhejiang province, China between 2015 and 2017.
T218 20586-20726 Sentence denotes Thus this novel coronavirus should belong to the genus Betacoronavirus, subgenus Sabecovirus (previously lineage 2b of Group 2 coronavirus).
T219 20727-20840 Sentence denotes SARS-related coronaviruses have been found continuously especially in horseshoe bat species in the last 13 years.
T220 20841-21062 Sentence denotes Between 2003 and 2018, 339 complete SARS-related coronavirus genomes have been sequenced, including 274 human SARS-CoV, 18 civet SARS coronavirus, and 47 bat SARS-related coronaviruses mainly from Rhinolophus bat species.
T221 21063-21133 Sentence denotes Together, they formed a distinct subclade among other lineage B βCoVs.
T222 21134-21214 Sentence denotes These results suggested that the 2019-nCoV might have also originated from bats.
T223 21215-21415 Sentence denotes But we cannot ascertain whether another intermediate or amplification animal host infected by 2019-nCoV could be found in the epidemiological market, just as in the case of Paguma civets for SARS-CoV.
T224 21416-21425 Sentence denotes Figure 6.
T225 21426-21721 Sentence denotes Phylogenetic tree construction by the neighbour joining method was performed using MEGA X software, with bootstrap values being calculated from 1000 trees using amino acid sequences of (A) orf1ab polypeptide; (B) Spike glycoprotein; (C) Envelope protein; (D) Membrane protein; (E) Nucleoprotein.
T226 21723-21747 Sentence denotes RNA secondary structures
T227 21748-21864 Sentence denotes As shown in Figure 7(A–C), the SARS-CoV 5′-UTR contains SL1, SL2, SL3, SL4, S5, SL5A, SL5B, SL5C, SL6, SL7, and SL8.
T228 21865-21903 Sentence denotes The SL3 contains trans–cis motif [27].
T229 21904-22043 Sentence denotes The SL1, SL2, SL3, SL4, S5, SL5A, SL5B, and SL5C structures were similar among the 2019-nCoV, human SARS-CoV and the bat SARS-related ZC45.
T230 22044-22153 Sentence denotes In the 2019-nCoV, part of the S5 found was inside the orf1a/b (marked in red), which was similar to SARS-CoV.
T231 22154-22220 Sentence denotes In bat SARS-related CoV ZC45, the S5 was not found inside orf1a/b.
T232 22221-22307 Sentence denotes The 2019-nCoV had the same SL6, SL7, and SL8 as SARS-CoV, and an additional stem loop.
T233 22308-22379 Sentence denotes Bat SARS-related CoV ZC45 did not have the SARS-COV SL6-like stem loop.
T234 22380-22438 Sentence denotes Instead, it possessed two other stem loops in this region.
T235 22439-22481 Sentence denotes All three strains had similar SL7 and SL8.
T236 22482-22562 Sentence denotes The bat SARS-like CoV ZC45 also had an additional stem loop between SL7 and SL8.
T237 22563-22669 Sentence denotes Overall, the 5′-UTR of 2019-nCoV was more similar to that of SARS-CoV than the bat SARS-related CoV ZC 45.
T238 22670-22776 Sentence denotes The biological relevance and effects of virulence of the 5′-UTR structures should be investigated further.
T239 22777-22889 Sentence denotes The 2019-nCoV had various 3′-UTR structures, including BSL, S1, S2, S3, S4, L1, L2, L3, and HVR (Figure 7(D–F)).
T240 22890-22974 Sentence denotes The 3′-UTR was conserved among 2019-nCoV, human SARS-CoV and SARS-related CoVs [27].
T241 22975-22984 Sentence denotes Figure 7.
T242 22985-23192 Sentence denotes Secondary structure prediction and comparison in the 5′-untranslated region (UTR) and 3′-UTR using the RNAfold WebServer (with minimum free energy and partition function in Fold algorithms and basic options.
T243 23193-23422 Sentence denotes The SARS 5′- and 3′- UTR was used as a reference to adjust the prediction results.(A) SARS-CoV 5'-UTR; (B) 2019-nCoV (HKU-SZ-005b) 5'-UTR; (C) ZC45 5'-UTR; (D) SARS-CoV 3'-UTR; (E) 2019-nCoV (HKU-SZ-005b) 3'-UTR; (F) ZC45 3'-UTR.
T244 23423-23532 Sentence denotes In summary, 2019-nCoV is a novel lineage B Betacoronavirus closely related to bat SARS-related coronaviruses.
T245 23533-23675 Sentence denotes It also has unique genomic features which deserves further investigation to ascertain their roles in viral replication cycle and pathogenesis.
T246 23676-23795 Sentence denotes More animal sampling to determine its natural animal reservoir and intermediate animal host in the market is important.
T247 23796-23972 Sentence denotes This will shed light on the evolutionary history of this emerging coronavirus which has jumped into human after the other two zoonotic Betacoroanviruses, SARS-CoV and MERS-CoV.

2_test

Id Subject Object Predicate Lexical cue
31987001-23770275-27754475 320-321 23770275 denotes 1
31987001-17934078-27754476 909-910 17934078 denotes 2
31987001-25810418-27754477 911-912 25810418 denotes 3
31987001-15613317-27754478 1639-1640 15613317 denotes 4
31987001-12711465-27754479 2056-2057 12711465 denotes 5
31987001-27572168-27754480 2058-2059 27572168 denotes 6
31987001-3447015-27754481 5612-5614 3447015 denotes 12
31987001-28561359-27754482 5771-5773 28561359 denotes 13
31987001-29722887-27754483 6211-6213 29722887 denotes 15
31987001-31251384-27754484 6417-6419 31251384 denotes 16
31987001-30989115-27754485 12164-12166 30989115 denotes 18
31987001-25211075-27754486 15192-15194 25211075 denotes 17
31987001-16282490-27754487 15534-15536 16282490 denotes 19
31987001-16965829-27754488 15859-15861 16965829 denotes 20
31987001-17108024-27754489 15945-15947 17108024 denotes 21
31987001-22012463-27754490 16127-16129 22012463 denotes 22
31987001-15695582-27754491 17035-17037 15695582 denotes 23
31987001-17928347-27754492 17234-17236 17928347 denotes 24
31987001-26269185-27754493 17445-17447 26269185 denotes 25
31987001-31231549-27754494 18729-18731 31231549 denotes 26
31987001-25736566-27754495 21899-21901 25736566 denotes 27
31987001-25736566-27754496 22970-22972 25736566 denotes 27

MyTest

Id Subject Object Predicate Lexical cue
31987001-23770275-27754475 320-321 23770275 denotes 1
31987001-17934078-27754476 909-910 17934078 denotes 2
31987001-25810418-27754477 911-912 25810418 denotes 3
31987001-15613317-27754478 1639-1640 15613317 denotes 4
31987001-12711465-27754479 2056-2057 12711465 denotes 5
31987001-27572168-27754480 2058-2059 27572168 denotes 6
31987001-3447015-27754481 5612-5614 3447015 denotes 12
31987001-28561359-27754482 5771-5773 28561359 denotes 13
31987001-29722887-27754483 6211-6213 29722887 denotes 15
31987001-31251384-27754484 6417-6419 31251384 denotes 16
31987001-30989115-27754485 12164-12166 30989115 denotes 18
31987001-25211075-27754486 15192-15194 25211075 denotes 17
31987001-16282490-27754487 15534-15536 16282490 denotes 19
31987001-16965829-27754488 15859-15861 16965829 denotes 20
31987001-17108024-27754489 15945-15947 17108024 denotes 21
31987001-22012463-27754490 16127-16129 22012463 denotes 22
31987001-15695582-27754491 17035-17037 15695582 denotes 23
31987001-17928347-27754492 17234-17236 17928347 denotes 24
31987001-26269185-27754493 17445-17447 26269185 denotes 25
31987001-31231549-27754494 18729-18731 31231549 denotes 26
31987001-25736566-27754495 21899-21901 25736566 denotes 27
31987001-25736566-27754496 22970-22972 25736566 denotes 27