PMC:7067204 / 12671-13197 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"658","span":{"begin":163,"end":166},"obj":"Gene"},{"id":"659","span":{"begin":376,"end":381},"obj":"Gene"},{"id":"660","span":{"begin":478,"end":482},"obj":"Gene"},{"id":"661","span":{"begin":137,"end":146},"obj":"Species"},{"id":"662","span":{"begin":147,"end":156},"obj":"Species"},{"id":"663","span":{"begin":183,"end":191},"obj":"Species"},{"id":"668","span":{"begin":37,"end":40},"obj":"Gene"},{"id":"669","span":{"begin":41,"end":63},"obj":"Species"},{"id":"670","span":{"begin":68,"end":93},"obj":"Species"},{"id":"671","span":{"begin":103,"end":111},"obj":"Species"}],"attributes":[{"id":"A658","pred":"tao:has_database_id","subj":"658","obj":"Gene:570"},{"id":"A659","pred":"tao:has_database_id","subj":"659","obj":"Gene:43740568"},{"id":"A660","pred":"tao:has_database_id","subj":"660","obj":"Gene:43740577"},{"id":"A661","pred":"tao:has_database_id","subj":"661","obj":"Tax:2697049"},{"id":"A662","pred":"tao:has_database_id","subj":"662","obj":"Tax:2697049"},{"id":"A663","pred":"tao:has_database_id","subj":"663","obj":"Tax:694009"},{"id":"A668","pred":"tao:has_database_id","subj":"668","obj":"Gene:25085"},{"id":"A669","pred":"tao:has_database_id","subj":"669","obj":"Tax:2697049"},{"id":"A670","pred":"tao:has_database_id","subj":"670","obj":"Tax:1508227"},{"id":"A671","pred":"tao:has_database_id","subj":"671","obj":"Tax:694009"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T63","span":{"begin":9,"end":19},"obj":"Body_part"},{"id":"T64","span":{"begin":113,"end":123},"obj":"Body_part"}],"attributes":[{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T55","span":{"begin":72,"end":76},"obj":"Disease"},{"id":"T56","span":{"begin":103,"end":111},"obj":"Disease"},{"id":"T57","span":{"begin":142,"end":151},"obj":"Disease"},{"id":"T58","span":{"begin":183,"end":191},"obj":"Disease"}],"attributes":[{"id":"A55","pred":"mondo_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A56","pred":"mondo_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A57","pred":"mondo_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A58","pred":"mondo_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T120","span":{"begin":68,"end":71},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T121","span":{"begin":97,"end":102},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T122","span":{"begin":163,"end":166},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T123","span":{"begin":428,"end":436},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T124","span":{"begin":448,"end":450},"obj":"http://purl.obolibrary.org/obo/CLO_0001527"},{"id":"T125","span":{"begin":489,"end":491},"obj":"http://purl.obolibrary.org/obo/CLO_0001527"},{"id":"T126","span":{"begin":509,"end":511},"obj":"http://purl.obolibrary.org/obo/CLO_0001527"},{"id":"T127","span":{"begin":512,"end":514},"obj":"http://purl.obolibrary.org/obo/CLO_0001527"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T62","span":{"begin":9,"end":19},"obj":"Chemical"},{"id":"T63","span":{"begin":15,"end":19},"obj":"Chemical"},{"id":"T64","span":{"begin":113,"end":123},"obj":"Chemical"},{"id":"T65","span":{"begin":119,"end":123},"obj":"Chemical"},{"id":"T66","span":{"begin":167,"end":169},"obj":"Chemical"}],"attributes":[{"id":"A62","pred":"chebi_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/CHEBI_33704"},{"id":"A63","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A64","pred":"chebi_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/CHEBI_33704"},{"id":"A65","pred":"chebi_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A66","pred":"chebi_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/CHEBI_74815"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}

{"project":"LitCovid-sentences","denotations":[{"id":"T123","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T124","span":{"begin":9,"end":112},"obj":"Sentence"},{"id":"T125","span":{"begin":113,"end":156},"obj":"Sentence"},{"id":"T126","span":{"begin":157,"end":191},"obj":"Sentence"},{"id":"T127","span":{"begin":192,"end":202},"obj":"Sentence"},{"id":"T128","span":{"begin":203,"end":213},"obj":"Sentence"},{"id":"T129","span":{"begin":214,"end":224},"obj":"Sentence"},{"id":"T130","span":{"begin":225,"end":235},"obj":"Sentence"},{"id":"T131","span":{"begin":236,"end":246},"obj":"Sentence"},{"id":"T132","span":{"begin":247,"end":257},"obj":"Sentence"},{"id":"T133","span":{"begin":258,"end":268},"obj":"Sentence"},{"id":"T134","span":{"begin":269,"end":279},"obj":"Sentence"},{"id":"T135","span":{"begin":280,"end":290},"obj":"Sentence"},{"id":"T136","span":{"begin":291,"end":302},"obj":"Sentence"},{"id":"T137","span":{"begin":303,"end":314},"obj":"Sentence"},{"id":"T138","span":{"begin":315,"end":326},"obj":"Sentence"},{"id":"T139","span":{"begin":327,"end":339},"obj":"Sentence"},{"id":"T140","span":{"begin":340,"end":351},"obj":"Sentence"},{"id":"T141","span":{"begin":352,"end":363},"obj":"Sentence"},{"id":"T142","span":{"begin":364,"end":375},"obj":"Sentence"},{"id":"T143","span":{"begin":376,"end":387},"obj":"Sentence"},{"id":"T144","span":{"begin":388,"end":399},"obj":"Sentence"},{"id":"T145","span":{"begin":400,"end":411},"obj":"Sentence"},{"id":"T146","span":{"begin":412,"end":427},"obj":"Sentence"},{"id":"T147","span":{"begin":428,"end":442},"obj":"Sentence"},{"id":"T148","span":{"begin":443,"end":453},"obj":"Sentence"},{"id":"T149","span":{"begin":454,"end":465},"obj":"Sentence"},{"id":"T150","span":{"begin":466,"end":477},"obj":"Sentence"},{"id":"T151","span":{"begin":478,"end":494},"obj":"Sentence"},{"id":"T152","span":{"begin":495,"end":514},"obj":"Sentence"},{"id":"T153","span":{"begin":515,"end":526},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table 3. Amino acid identity between the 2019 novel coronavirus and bat SARS-like coronavirus or human SARS-CoV.\nAmino acid identity (%) 2019-nCoV 2019-nCoV\n  vs. bat-SL-CoVZXC21 vs. SARS-CoV\nNSP1 96 84\nNSP2 96 68\nNSP3 93 76\nNSP4 96 80\nNSP5 99 96\nNSP6 98 88\nNSP7 99 99\nNSP8 96 97\nNSP9 96 97\nNSP10 98 97\nNSP11 85 85\nNSP12 96 96\nNSP13 99 100\nNSP14 95 95\nNSP15 88 89\nNSP16 98 93\nSpike 80 76\nOrf3a 92 72\nOrf3b 32 32\nEnvelope 100 95\nMembrane 99 91\nOrf6 94 69\nOrf7a 89 85\nOrf7b 93 81\nOrf8/Orf8b 94 40\nNucleoprotein 94 94\nOrf9b 73 73"}