PMC:7063555 / 4653-5449
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45 | 69-73 | SP_9 | denotes | MERS |
| T44 | 106-112 | GO:0016265 | denotes | deaths |
| T43 | 283-288 | UBERON:0000948 | denotes | heart |
| T42 | 290-295 | UBERON:0000170 | denotes | lungs |
| T41 | 301-308 | UBERON:0002113 | denotes | kidneys |
| T40 | 409-420 | UBERON:0001004 | denotes | respiratory |
| T39 | 475-481 | UBERON:0002113 | denotes | kidney |
| T38 | 575-583 | SP_9 | denotes | MERS-CoV |
| T37 | 608-616 | SP_10 | denotes | SARS-CoV |
| T36 | 664-670 | NCBITaxon:33208 | denotes | animal |
| T35 | 675-680 | SP_6;NCBITaxon:9606 | denotes | human |
| T34 | 783-790 | NCBITaxon:1 | denotes | persons |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T7 | 283-288 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
| T8 | 290-295 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T9 | 301-308 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
| T10 | 475-481 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T7 | 283-288 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T8 | 475-481 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T42 | 403-407 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T43 | 469-488 | Disease | denotes | acute kidney injury | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T44 | 482-488 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T45 | 608-616 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T46 | 608-612 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T46 | 141-143 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T47 | 193-196 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T48 | 283-288 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
| T49 | 283-288 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
| T50 | 283-288 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
| T51 | 283-288 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
| T52 | 290-295 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T53 | 301-308 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
| T54 | 301-308 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
| T55 | 301-308 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
| T56 | 475-481 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T57 | 475-481 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T58 | 475-481 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T59 | 518-520 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T60 | 664-670 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T61 | 675-680 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T62 | 764-770 | http://purl.obolibrary.org/obo/NCBITaxon_9837 | denotes | camels |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T33 | 0-159 | Sentence | denotes | From 2012 to the end of January 2020, over 2500 laboratory-confirmed MERS cases, including 866 associated deaths, were reported worldwide in 27 countries (13). |
| T34 | 160-309 | Sentence | denotes | The largest number of such cases has been reported among the elderly, diabetics, and patients with chronic diseases of the heart, lungs, and kidneys. |
| T35 | 310-499 | Sentence | denotes | Over 80% of the patients required admission to the ICU, most often due to the development of ARDS, respiratory insufficiency requiring mechanical ventilation, acute kidney injury, or shock. |
| T36 | 500-565 | Sentence | denotes | The CFR is around 35%, and even 75% in patients >60 years of age. |
| T37 | 566-796 | Sentence | denotes | However, MERS-CoV, unlike its predecessor SARS-CoV, did not disappear, but still circulates among animal and human populations, occasionally causing outbreaks, either in connection with exposure to camels or infected persons (12). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T12 | 409-434 | Phenotype | denotes | respiratory insufficiency | http://purl.obolibrary.org/obo/HP_0002093 |
| T13 | 469-488 | Phenotype | denotes | acute kidney injury | http://purl.obolibrary.org/obo/HP_0001919 |
| T14 | 493-498 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32118371-28826284-23737344 | 792-794 | 28826284 | denotes | 12 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 172 | 245-253 | Species | denotes | patients | Tax:9606 |
| 173 | 326-334 | Species | denotes | patients | Tax:9606 |
| 174 | 539-547 | Species | denotes | patients | Tax:9606 |
| 175 | 575-583 | Species | denotes | MERS-CoV | Tax:1335626 |
| 176 | 608-616 | Species | denotes | SARS-CoV | Tax:694009 |
| 177 | 675-680 | Species | denotes | human | Tax:9606 |
| 178 | 764-770 | Species | denotes | camels | Tax:9838 |
| 179 | 783-790 | Species | denotes | persons | Tax:9606 |
| 180 | 69-73 | Disease | denotes | MERS | MESH:D018352 |
| 181 | 106-112 | Disease | denotes | deaths | MESH:D003643 |
| 182 | 230-239 | Disease | denotes | diabetics | MESH:D003920 |
| 183 | 403-407 | Disease | denotes | ARDS | MESH:D012128 |
| 184 | 409-434 | Disease | denotes | respiratory insufficiency | MESH:D012131 |
| 185 | 469-488 | Disease | denotes | acute kidney injury | MESH:D058186 |
| 186 | 493-498 | Disease | denotes | shock | MESH:D012769 |
| 187 | 774-782 | Disease | denotes | infected | MESH:D007239 |