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PMC:7060038 / 50064-51018 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
345 321-329 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T7 205-210 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T54 321-329 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T177 38-39 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T51853 40-45 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T41335 189-194 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T29870 298-303 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T306 0-30 Sentence denotes Incubation period distribution
T307 31-96 Sentence denotes We use a gamma distribution to model individual incubation times.
T308 97-280 Sentence denotes We choose this form over the Weibull and lognormal distribution for ease of interpretation (gamma shape and scale parameters can be transformed easily to mean and standard deviation).
T309 281-465 Sentence denotes So far, best-fit gamma distributions to COVID-19 data have had mean 6.5 and standard deviation 2.6 (Backer et al., 2020), or mean 5.46 and standard deviation 1.94 (Lauer et al., 2020).
T310 466-703 Sentence denotes Here, to model uncertainty around the true mean incubation time, we fix the standard deviation to 2.25 (intermediate between the two existing estimates), and allow the mean to vary between 4.5 and 6.5 days (Figure 2—figure supplement 2).
T311 704-954 Sentence denotes The 95th percentile of the distributions we consider fall between 8.7 and 10.6 days, slightly below the officially accepted maximum incubation time of 14 days, and consistent with existing estimates (Table 1; Backer et al., 2020; Lauer et al., 2020).