PMC:7055038 / 5804-6219 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"110","span":{"begin":100,"end":103},"obj":"Species"},{"id":"111","span":{"begin":215,"end":232},"obj":"Species"},{"id":"112","span":{"begin":254,"end":262},"obj":"Species"},{"id":"113","span":{"begin":334,"end":337},"obj":"Species"}],"attributes":[{"id":"A110","pred":"tao:has_database_id","subj":"110","obj":"Tax:11118"},{"id":"A111","pred":"tao:has_database_id","subj":"111","obj":"Tax:694002"},{"id":"A112","pred":"tao:has_database_id","subj":"112","obj":"Tax:694009"},{"id":"A113","pred":"tao:has_database_id","subj":"113","obj":"Tax:11118"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T26","span":{"begin":18,"end":24},"obj":"Body_part"},{"id":"T27","span":{"begin":268,"end":274},"obj":"Body_part"}],"attributes":[{"id":"A26","pred":"fma_id","subj":"T26","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A27","pred":"fma_id","subj":"T27","obj":"http://purl.org/sig/ont/fma/fma84116"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T29","span":{"begin":200,"end":204},"obj":"Disease"},{"id":"T30","span":{"begin":254,"end":262},"obj":"Disease"},{"id":"T31","span":{"begin":254,"end":258},"obj":"Disease"},{"id":"T32","span":{"begin":320,"end":324},"obj":"Disease"}],"attributes":[{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A30","pred":"mondo_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A32","pred":"mondo_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T54","span":{"begin":40,"end":41},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T55","span":{"begin":166,"end":168},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T56","span":{"begin":330,"end":333},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"2_test","denotations":[{"id":"32127124-29506019-29320639","span":{"begin":127,"end":129},"obj":"29506019"},{"id":"32127124-29722887-29320640","span":{"begin":166,"end":168},"obj":"29722887"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"LitCovid-sentences","denotations":[{"id":"T55","span":{"begin":0,"end":415},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}

{"project":"MyTest","denotations":[{"id":"32127124-29506019-29320639","span":{"begin":127,"end":129},"obj":"29506019"},{"id":"32127124-29722887-29320640","span":{"begin":166,"end":168},"obj":"29722887"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"Comparing the two genome sequences with a non-redundant selection of representatives from all known CoV families by alignment [10] and phylogenetic tree (Figure 1A) [11] shows that they belong to the SARS family of betacoronaviruses and while related to SARS-CoV (80% genome identity), they were most closely related to SARS-like bat CoV from China (88% identity) as closest known sequence at the time of emergence."}