PMC:7055038 / 1344-2662
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
35 | 2-7 | Species | denotes | woman | Tax:9606 |
36 | 48-53 | Disease | denotes | fever | MESH:D005334 |
37 | 67-78 | Disease | denotes | sore throat | MESH:D010608 |
38 | 83-91 | Disease | denotes | headache | MESH:D006261 |
39 | 550-568 | Disease | denotes | Infectious Disease | MESH:D003141 |
40 | 683-694 | Disease | denotes | sore throat | MESH:D010608 |
41 | 702-709 | Disease | denotes | dyspnea | MESH:D004417 |
42 | 713-722 | Disease | denotes | diarrhoea | MESH:D003967 |
43 | 920-935 | Disease | denotes | viral infection | MESH:D001102 |
44 | 1102-1111 | Disease | denotes | pneumonia | MESH:D011014 |
45 | 1251-1263 | Disease | denotes | cardiomegaly | MESH:D006332 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T4 | 72-78 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
T5 | 674-678 | Body_part | denotes | nose | http://purl.org/sig/ont/fma/fma46472 |
T6 | 688-694 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
T7 | 788-793 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T8 | 870-874 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T9 | 896-901 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T10 | 962-972 | Body_part | denotes | neutrophil | http://purl.org/sig/ont/fma/fma62860 |
T11 | 996-1006 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
T12 | 1042-1047 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
T13 | 1133-1137 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T14 | 1160-1165 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
T15 | 1194-1198 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 72-78 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
T2 | 674-678 | Body_part | denotes | nose | http://purl.obolibrary.org/obo/UBERON_0000004 |
T3 | 688-694 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
T4 | 788-793 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T5 | 870-874 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T6 | 896-901 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T7 | 1042-1047 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T8 | 1133-1137 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T9 | 1194-1198 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T13 | 67-78 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
T14 | 550-560 | Disease | denotes | Infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
T15 | 668-678 | Disease | denotes | runny nose | http://purl.obolibrary.org/obo/MONDO_0003014 |
T16 | 683-694 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
T17 | 713-722 | Disease | denotes | diarrhoea | http://purl.obolibrary.org/obo/MONDO_0001673 |
T18 | 920-935 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
T19 | 926-935 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T20 | 1102-1111 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T3 | 46-47 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T4 | 123-124 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T5 | 221-222 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T6 | 305-306 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T7 | 440-441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T8 | 666-667 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T9 | 674-678 | http://www.ebi.ac.uk/efo/EFO_0000828 | denotes | nose |
T10 | 788-793 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T11 | 788-793 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T12 | 870-874 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T13 | 870-874 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T14 | 896-901 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T15 | 896-901 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T16 | 918-919 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T17 | 974-976 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T18 | 985-987 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T19 | 1042-1047 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
T20 | 1133-1137 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T21 | 1133-1137 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T22 | 1160-1165 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
T23 | 1194-1198 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T24 | 1194-1198 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 312-317 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 237-243 | http://purl.obolibrary.org/obo/GO_0060361 | denotes | flight |
T2 | 920-935 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T2 | 48-53 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
T3 | 59-65 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
T4 | 67-78 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
T5 | 83-91 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
T6 | 668-678 | Phenotype | denotes | runny nose | http://purl.obolibrary.org/obo/HP_0031417 |
T7 | 683-694 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
T8 | 702-709 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
T9 | 713-722 | Phenotype | denotes | diarrhoea | http://purl.obolibrary.org/obo/HP_0002014 |
T10 | 1102-1111 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T11 | 1251-1263 | Phenotype | denotes | cardiomegaly | http://purl.obolibrary.org/obo/HP_0001640 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32127124-27995553-29320638 | 1034-1035 | 27995553 | denotes | 8 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12 | 0-110 | Sentence | denotes | A woman in her early 60s from Wuhan developed a fever with chills, sore throat and headache on 5 January 2020. |
T13 | 111-192 | Sentence | denotes | She went to a local health facility in China and received undisclosed medication. |
T14 | 193-345 | Sentence | denotes | On 8 January 2020, she took a direct ca 4 h flight to Thailand from Wuhan, with five family members, as part of a tour group of 16 (including the case). |
T15 | 346-463 | Sentence | denotes | Her measured temperature at the arrival gate was 38.6 °C by thermoscanner, and confirmed with a tympanic thermometer. |
T16 | 464-652 | Sentence | denotes | After being interviewed by quarantine officers, she was transferred to Bamrasnaradura Infectious Disease Institute (BIDI) Hospital, Nonthaburi, for isolation and laboratory investigations. |
T17 | 653-723 | Sentence | denotes | She reported a runny nose and sore throat but no dyspnea or diarrhoea. |
T18 | 724-803 | Sentence | denotes | Upon admission, her vital signs were normal except for elevated blood pressure. |
T19 | 804-882 | Sentence | denotes | Her physical examination was unremarkable including inconspicuous lung sounds. |
T20 | 883-984 | Sentence | denotes | Her complete blood count suggested a viral infection from relatively decreased neutrophil (48%; norm: |
T21 | 985-1018 | Sentence | denotes | 35–75%) to lymphocyte (40%; norm: |
T22 | 1019-1037 | Sentence | denotes | 20–59%) ratio [8]. |
T23 | 1038-1224 | Sentence | denotes | The chest X-ray (CXR) results on 8 January were compatible with pneumonia with mild thickening lung marking at both lower lungs possibly because of crowded lung rather than infiltration. |
T24 | 1225-1264 | Sentence | denotes | It also showed borderline cardiomegaly. |
T25 | 1265-1318 | Sentence | denotes | Repeat CXR after 7 days showed no remarkable changes. |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32127124-27995553-29320638 | 1034-1035 | 27995553 | denotes | 8 |