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PMC:7055038 / 1344-2662 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
35 2-7 Species denotes woman Tax:9606
36 48-53 Disease denotes fever MESH:D005334
37 67-78 Disease denotes sore throat MESH:D010608
38 83-91 Disease denotes headache MESH:D006261
39 550-568 Disease denotes Infectious Disease MESH:D003141
40 683-694 Disease denotes sore throat MESH:D010608
41 702-709 Disease denotes dyspnea MESH:D004417
42 713-722 Disease denotes diarrhoea MESH:D003967
43 920-935 Disease denotes viral infection MESH:D001102
44 1102-1111 Disease denotes pneumonia MESH:D011014
45 1251-1263 Disease denotes cardiomegaly MESH:D006332

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 72-78 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T5 674-678 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T6 688-694 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T7 788-793 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T8 870-874 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T9 896-901 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T10 962-972 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T11 996-1006 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T12 1042-1047 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T13 1133-1137 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T14 1160-1165 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T15 1194-1198 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 72-78 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T2 674-678 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T3 688-694 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T4 788-793 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T5 870-874 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 896-901 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T7 1042-1047 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T8 1133-1137 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T9 1194-1198 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T13 67-78 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T14 550-560 Disease denotes Infectious http://purl.obolibrary.org/obo/MONDO_0005550
T15 668-678 Disease denotes runny nose http://purl.obolibrary.org/obo/MONDO_0003014
T16 683-694 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T17 713-722 Disease denotes diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T18 920-935 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T19 926-935 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T20 1102-1111 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T3 46-47 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 123-124 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 221-222 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 305-306 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 440-441 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 666-667 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 674-678 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T10 788-793 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T11 788-793 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T12 870-874 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T13 870-874 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T14 896-901 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T15 896-901 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T16 918-919 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 974-976 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T18 985-987 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T19 1042-1047 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T20 1133-1137 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T21 1133-1137 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T22 1160-1165 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T23 1194-1198 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T24 1194-1198 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 312-317 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 237-243 http://purl.obolibrary.org/obo/GO_0060361 denotes flight
T2 920-935 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 48-53 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 59-65 Phenotype denotes chills http://purl.obolibrary.org/obo/HP_0025143
T4 67-78 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T5 83-91 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T6 668-678 Phenotype denotes runny nose http://purl.obolibrary.org/obo/HP_0031417
T7 683-694 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T8 702-709 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T9 713-722 Phenotype denotes diarrhoea http://purl.obolibrary.org/obo/HP_0002014
T10 1102-1111 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 1251-1263 Phenotype denotes cardiomegaly http://purl.obolibrary.org/obo/HP_0001640

2_test

Id Subject Object Predicate Lexical cue
32127124-27995553-29320638 1034-1035 27995553 denotes 8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T12 0-110 Sentence denotes A woman in her early 60s from Wuhan developed a fever with chills, sore throat and headache on 5 January 2020.
T13 111-192 Sentence denotes She went to a local health facility in China and received undisclosed medication.
T14 193-345 Sentence denotes On 8 January 2020, she took a direct ca 4 h flight to Thailand from Wuhan, with five family members, as part of a tour group of 16 (including the case).
T15 346-463 Sentence denotes Her measured temperature at the arrival gate was 38.6 °C by thermoscanner, and confirmed with a tympanic thermometer.
T16 464-652 Sentence denotes After being interviewed by quarantine officers, she was transferred to Bamrasnaradura Infectious Disease Institute (BIDI) Hospital, Nonthaburi, for isolation and laboratory investigations.
T17 653-723 Sentence denotes She reported a runny nose and sore throat but no dyspnea or diarrhoea.
T18 724-803 Sentence denotes Upon admission, her vital signs were normal except for elevated blood pressure.
T19 804-882 Sentence denotes Her physical examination was unremarkable including inconspicuous lung sounds.
T20 883-984 Sentence denotes Her complete blood count suggested a viral infection from relatively decreased neutrophil (48%; norm:
T21 985-1018 Sentence denotes 35–75%) to lymphocyte (40%; norm:
T22 1019-1037 Sentence denotes 20–59%) ratio [8].
T23 1038-1224 Sentence denotes The chest X-ray (CXR) results on 8 January were compatible with pneumonia with mild thickening lung marking at both lower lungs possibly because of crowded lung rather than infiltration.
T24 1225-1264 Sentence denotes It also showed borderline cardiomegaly.
T25 1265-1318 Sentence denotes Repeat CXR after 7 days showed no remarkable changes.

MyTest

Id Subject Object Predicate Lexical cue
32127124-27995553-29320638 1034-1035 27995553 denotes 8