PMC:7054964 / 8434-9948
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
139 | 1245-1252 | Species | denotes | Patient | Tax:9606 |
140 | 1394-1401 | Species | denotes | patient | Tax:9606 |
141 | 1471-1478 | Species | denotes | patient | Tax:9606 |
142 | 1442-1451 | Disease | denotes | Infection | MESH:D007239 |
143 | 1500-1509 | Disease | denotes | infection | MESH:D007239 |
154 | 36-44 | Species | denotes | patients | Tax:9606 |
155 | 78-85 | Species | denotes | Patient | Tax:9606 |
156 | 193-202 | Species | denotes | 2019-nCoV | Tax:2697049 |
157 | 447-454 | Species | denotes | Patient | Tax:9606 |
158 | 746-753 | Species | denotes | Patient | Tax:9606 |
159 | 939-946 | Species | denotes | Patient | Tax:9606 |
160 | 319-328 | Disease | denotes | infection | MESH:D007239 |
161 | 987-1002 | Disease | denotes | virus infection | MESH:D001102 |
162 | 1023-1031 | Disease | denotes | infected | MESH:D007239 |
163 | 1035-1044 | Disease | denotes | infection | MESH:D007239 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T52 | 61-66 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
T53 | 73-76 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T54 | 271-276 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T55 | 649-654 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T56 | 808-813 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T57 | 1058-1061 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T58 | 1082-1087 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T59 | 1310-1313 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T60 | 1317-1322 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T30 | 61-66 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
T31 | 271-276 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T32 | 649-654 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T33 | 808-813 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T34 | 1082-1087 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T35 | 1317-1322 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T17 | 319-328 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T18 | 613-615 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
T19 | 722-724 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
T20 | 987-1002 | Disease | denotes | virus infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
T21 | 993-1002 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T22 | 1035-1044 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T23 | 1171-1173 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
T24 | 1442-1451 | Disease | denotes | Infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T25 | 1500-1509 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T123 | 98-99 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T124 | 153-155 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T125 | 203-208 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T126 | 271-276 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T127 | 271-276 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T128 | 346-349 | http://purl.obolibrary.org/obo/CL_0000990 | denotes | CDC |
T129 | 443-445 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
T130 | 467-468 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T131 | 529-530 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T132 | 531-534 | http://purl.obolibrary.org/obo/CL_0000990 | denotes | CDC |
T133 | 649-654 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T134 | 649-654 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T135 | 681-686 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T136 | 808-813 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T137 | 808-813 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T138 | 825-830 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T139 | 900-901 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T140 | 968-969 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T141 | 987-992 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T142 | 1082-1087 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T143 | 1082-1087 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T144 | 1256-1257 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T145 | 1262-1268 | http://purl.obolibrary.org/obo/CLO_0001818 | denotes | (B), 5 |
T146 | 1304-1309 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T147 | 1317-1322 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T148 | 1317-1322 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T149 | 1324-1330 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | Labels |
T150 | 1438-1439 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T151 | 1484-1485 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T64 | 0-77 | Sentence | denotes | Finally, we described here the four patients with detectable serum viral RNA. |
T65 | 78-360 | Sentence | denotes | Patient 3 (Figure 3(A)) was transferred to the ICU directly on illness day 11 because of his severe condition, the 2019-nCoV virus was laboratory detected both in pharyngeal (Ct = 30 + 30) and blood samples (Ct = 37 + 39) on day 12, And his infection was confirmed by CDC on day 13. |
T66 | 361-446 | Sentence | denotes | Pharyngeal samples were PCR positive on days 14 and 17 and became negative on day 22. |
T67 | 447-548 | Sentence | denotes | Patient 4 (Figure 3(B)) was transferred to the ICU ward on the illness day 6 with a CDC confirmation. |
T68 | 549-711 | Sentence | denotes | His disease advanced pretty fast and became severe on day 7 and he was transferred to ICU after his blood sample was detected to be virus-positive (Ct = 32 + 37). |
T69 | 712-745 | Sentence | denotes | On day 9, he was transferred out. |
T70 | 746-865 | Sentence | denotes | Patient 5 (Figure 3(C)) was admitted on illness day 4 and his blood sample was virus-positive (Ct = 38 + Neg) on day 6. |
T71 | 866-938 | Sentence | denotes | Her disease progressed rapidly to a severe stage within the next 3 days. |
T72 | 939-1051 | Sentence | denotes | Patient 6 (Figure 3(D)) with a clear history of virus infection was confirmed to be infected on infection day 7. |
T73 | 1052-1144 | Sentence | denotes | Viral RNA was detected in his blood sample on day 9, one day ahead of his transfer into ICU. |
T74 | 1145-1204 | Sentence | denotes | As his condition worsens, he was transferred out on day 13. |
T75 | 1205-1214 | Sentence | denotes | Figure 3. |
T76 | 1215-1323 | Sentence | denotes | Diagram of viral detection in Patient 3 (A), 4 (B), 5 (C) and 6 (D) with both detectable virus RNA in blood. |
T77 | 1324-1366 | Sentence | denotes | Labels are identical to those in Figure 2. |
T78 | 1367-1441 | Sentence | denotes | Severe represents that the patient is diagnosed to be severe symptoms (B). |
T79 | 1442-1514 | Sentence | denotes | Infection day represents the patient with a clear time of infection (D). |