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PMC:7054964 / 8434-9948 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
139 1245-1252 Species denotes Patient Tax:9606
140 1394-1401 Species denotes patient Tax:9606
141 1471-1478 Species denotes patient Tax:9606
142 1442-1451 Disease denotes Infection MESH:D007239
143 1500-1509 Disease denotes infection MESH:D007239
154 36-44 Species denotes patients Tax:9606
155 78-85 Species denotes Patient Tax:9606
156 193-202 Species denotes 2019-nCoV Tax:2697049
157 447-454 Species denotes Patient Tax:9606
158 746-753 Species denotes Patient Tax:9606
159 939-946 Species denotes Patient Tax:9606
160 319-328 Disease denotes infection MESH:D007239
161 987-1002 Disease denotes virus infection MESH:D001102
162 1023-1031 Disease denotes infected MESH:D007239
163 1035-1044 Disease denotes infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T52 61-66 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T53 73-76 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T54 271-276 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T55 649-654 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T56 808-813 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T57 1058-1061 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T58 1082-1087 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T59 1310-1313 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T60 1317-1322 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T30 61-66 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T31 271-276 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T32 649-654 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T33 808-813 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T34 1082-1087 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T35 1317-1322 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 319-328 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 613-615 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T19 722-724 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T20 987-1002 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T21 993-1002 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 1035-1044 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T23 1171-1173 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T24 1442-1451 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T25 1500-1509 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T123 98-99 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T124 153-155 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T125 203-208 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T126 271-276 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T127 271-276 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T128 346-349 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T129 443-445 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T130 467-468 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T131 529-530 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 531-534 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T133 649-654 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T134 649-654 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T135 681-686 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T136 808-813 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T137 808-813 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T138 825-830 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T139 900-901 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T140 968-969 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T141 987-992 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T142 1082-1087 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T143 1082-1087 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T144 1256-1257 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T145 1262-1268 http://purl.obolibrary.org/obo/CLO_0001818 denotes (B), 5
T146 1304-1309 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T147 1317-1322 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T148 1317-1322 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T149 1324-1330 http://purl.obolibrary.org/obo/CLO_0007225 denotes Labels
T150 1438-1439 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T151 1484-1485 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T64 0-77 Sentence denotes Finally, we described here the four patients with detectable serum viral RNA.
T65 78-360 Sentence denotes Patient 3 (Figure 3(A)) was transferred to the ICU directly on illness day 11 because of his severe condition, the 2019-nCoV virus was laboratory detected both in pharyngeal (Ct = 30 + 30) and blood samples (Ct = 37 + 39) on day 12, And his infection was confirmed by CDC on day 13.
T66 361-446 Sentence denotes Pharyngeal samples were PCR positive on days 14 and 17 and became negative on day 22.
T67 447-548 Sentence denotes Patient 4 (Figure 3(B)) was transferred to the ICU ward on the illness day 6 with a CDC confirmation.
T68 549-711 Sentence denotes His disease advanced pretty fast and became severe on day 7 and he was transferred to ICU after his blood sample was detected to be virus-positive (Ct = 32 + 37).
T69 712-745 Sentence denotes On day 9, he was transferred out.
T70 746-865 Sentence denotes Patient 5 (Figure 3(C)) was admitted on illness day 4 and his blood sample was virus-positive (Ct = 38 + Neg) on day 6.
T71 866-938 Sentence denotes Her disease progressed rapidly to a severe stage within the next 3 days.
T72 939-1051 Sentence denotes Patient 6 (Figure 3(D)) with a clear history of virus infection was confirmed to be infected on infection day 7.
T73 1052-1144 Sentence denotes Viral RNA was detected in his blood sample on day 9, one day ahead of his transfer into ICU.
T74 1145-1204 Sentence denotes As his condition worsens, he was transferred out on day 13.
T75 1205-1214 Sentence denotes Figure 3.
T76 1215-1323 Sentence denotes Diagram of viral detection in Patient 3 (A), 4 (B), 5 (C) and 6 (D) with both detectable virus RNA in blood.
T77 1324-1366 Sentence denotes Labels are identical to those in Figure 2.
T78 1367-1441 Sentence denotes Severe represents that the patient is diagnosed to be severe symptoms (B).
T79 1442-1514 Sentence denotes Infection day represents the patient with a clear time of infection (D).