PMC:7054935 / 2729-3181
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
93 | 4-9 | Species | denotes | mouse | Tax:10090 |
94 | 18-28 | Species | denotes | SARS virus | Tax:694009 |
95 | 98-106 | Species | denotes | SARS CoV | Tax:694009 |
96 | 148-152 | Species | denotes | mice | Tax:10090 |
97 | 175-179 | Species | denotes | mice | Tax:10090 |
98 | 185-193 | Species | denotes | SARS-CoV | Tax:694009 |
99 | 252-256 | Species | denotes | mice | Tax:10090 |
100 | 322-327 | Species | denotes | mouse | Tax:10090 |
101 | 400-405 | Species | denotes | human | Tax:9606 |
102 | 415-423 | Species | denotes | patients | Tax:9606 |
103 | 435-440 | Species | denotes | mouse | Tax:10090 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T172 | 4-9 | NCBITaxon:10088 | denotes | mouse |
T171 | 18-22 | SP_10;NCBITaxon:10633 | denotes | SARS |
T170 | 23-28 | NCBITaxon:10239 | denotes | virus |
T169 | 98-106 | SP_10 | denotes | SARS CoV |
T168 | 120-137 | UBERON:0000065 | denotes | respiratory tract |
T167 | 148-152 | NCBITaxon:10088 | denotes | mice |
T166 | 175-179 | NCBITaxon:10088 | denotes | mice |
T165 | 185-193 | SP_10 | denotes | SARS-CoV |
T164 | 210-221 | GO:0006260 | denotes | replication |
T163 | 226-230 | UBERON:0002048 | denotes | lung |
T162 | 252-256 | NCBITaxon:10088 | denotes | mice |
T161 | 288-295 | SO:0000704 | denotes | genetic |
T160 | 322-327 | NCBITaxon:10088 | denotes | mouse |
T159 | 400-405 | SP_6;NCBITaxon:9606 | denotes | human |
T158 | 435-440 | NCBITaxon:10088 | denotes | mouse |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T12 | 120-137 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
T13 | 226-230 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T14 | 406-411 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 120-137 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
T2 | 226-230 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid_AGAC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
p9248s12 | 210-221 | MPA | denotes | replication |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T38 | 18-22 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T39 | 78-88 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
T40 | 98-102 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T41 | 185-193 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T42 | 185-189 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T35 | 4-9 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T36 | 23-28 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T37 | 226-230 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T38 | 226-230 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T39 | 264-267 | http://purl.obolibrary.org/obo/CLO_0007461 | denotes | M15 |
T40 | 322-327 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T41 | 400-411 | http://purl.obolibrary.org/obo/CLO_0053065 | denotes | human cells |
T42 | 435-440 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 231-243 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19 | 0-153 | Sentence | denotes | The mouse-adapted SARS virus (MA15) [9] was generated by serial passage of an infectious wildtype SARS CoV clone in the respiratory tract of BALB/c mice. |
T20 | 154-339 | Sentence | denotes | After 15 passages in mice, the SARS-CoV gained elevated replication and lung pathogenesis in aged mice (hence M15), due to six coding genetic mutations associated with mouse adaptation. |
T21 | 340-452 | Sentence | denotes | It is likely that MA15 is highly attenuated to replicate in human cells or patients due to the mouse adaptation. |