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PMC:7050114 / 6365-9124 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
105 892-898 Species denotes people Tax:9606
106 1211-1217 Species denotes people Tax:9606
107 941-949 Disease denotes infected MESH:D007239
108 1111-1119 Disease denotes infected MESH:D007239
109 1290-1298 Disease denotes infected MESH:D007239
113 1444-1450 Species denotes people Tax:9606
114 1597-1605 Species denotes patients Tax:9606
115 1459-1467 Disease denotes infected MESH:D007239
123 2280-2283 Gene denotes TDF Gene:6736
124 2420-2424 Species denotes Lian Tax:155640
125 2076-2095 Chemical denotes Lopinavir/Ritonavir MESH:C558899
126 2181-2191 Chemical denotes Remdesivir MESH:C000606551
127 2604-2625 Chemical denotes chloroquine phosphate MESH:C023676
128 2053-2061 Disease denotes COVID-19 MESH:C000657245
129 2487-2495 Disease denotes COVID-19 MESH:C000657245
136 59-65 Species denotes humans Tax:9606
137 40-48 Disease denotes COVID-19 MESH:C000657245
138 236-255 Disease denotes recessive infection MESH:D007239
139 389-399 Disease denotes infections MESH:D007239
140 404-410 Disease denotes deaths MESH:D003643
141 470-474 Disease denotes SARS MESH:D045169

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T74 40-48 SP_7 denotes COVID-19
T73 59-65 NCBITaxon:9606 denotes humans
T72 94-100 NCBITaxon:9606 denotes person
T71 104-110 NCBITaxon:9606 denotes person
T70 187-192 NCBITaxon:10239 denotes virus
T69 404-410 GO:0016265 denotes deaths
T68 470-474 SP_10 denotes SARS
T67 509-519 GO:0065007 denotes controlled
T66 892-898 NCBITaxon:9606 denotes people
T65 991-996 NCBITaxon:10239 denotes virus
T64 1136-1140 GO:0016265 denotes died
T63 1211-1217 NCBITaxon:9606 denotes people
T61 2009-2014 CHEBI:23888;CHEBI:23888 denotes drugs
T60 2053-2061 SP_7 denotes COVID-19
T58 2086-2095 DG_30 denotes Ritonavir
T57 2097-2107 CHEBI:60783;CHEBI:60783 denotes Nucleoside
T56 2124-2133 DG_29 denotes ribavirin
T55 2150-2160 CHEBI:35222;CHEBI:35222 denotes inhibitors
T54 2167-2178 CHEBI:7798;CHEBI:7798 denotes oseltamivir
T53 2181-2191 DG_28 denotes Remdesivir
T52 2200-2213 CHEBI:36807;CHEBI:36807 denotes hydrochloride
T51 2215-2228 GO:0032774 denotes RNA synthesis
T50 2229-2239 CHEBI:35222;CHEBI:35222 denotes inhibitors
T49 2249-2278 CHEBI:63718;CHEBI:63718 denotes Tenofovir disoproxil fumarate
T48 2286-2309 CHEBI:35472;CHEBI:35472 denotes anti-inflammatory drugs
T47 2338-2347 CHEBI:36357;CHEBI:36357 denotes molecules
T46 2487-2495 SP_7 denotes COVID-19
T45 2536-2541 CHEBI:23888;CHEBI:23888 denotes drugs
T44 2604-2615 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T43 2616-2625 CHEBI:18367;CHEBI:18367 denotes phosphate
T42 2684-2692 CHEBI:75958;CHEBI:75958 denotes solution
T62 1444-1450 NCBITaxon:9606 denotes people
T59 2076-2085 DG_23 denotes Lopinavir

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 2215-2218 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T7 2319-2327 Body_part denotes hormones http://purl.org/sig/ont/fma/fma12278
T8 2407-2415 Body_part denotes Capsules http://purl.org/sig/ont/fma/fma85272
T9 2438-2445 Body_part denotes Capsule http://purl.org/sig/ont/fma/fma85272

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T6 2438-2445 Body_part denotes Capsule http://purl.obolibrary.org/obo/UBERON_0003893

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T23 40-48 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T24 246-255 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T25 389-399 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T26 470-474 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 2053-2061 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T28 2487-2495 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T37 59-65 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T38 187-192 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T39 734-735 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 991-996 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T41 1068-1070 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T42 1923-1926 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T43 2626-2629 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 2009-2014 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T3 2076-2085 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T4 2097-2107 Chemical denotes Nucleoside http://purl.obolibrary.org/obo/CHEBI_33838
T5 2124-2133 Chemical denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T6 2136-2160 Chemical denotes Neuraminidase inhibitors http://purl.obolibrary.org/obo/CHEBI_52425
T7 2150-2160 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T8 2167-2178 Chemical denotes oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T9 2200-2213 Chemical denotes hydrochloride http://purl.obolibrary.org/obo/CHEBI_36807
T10 2229-2239 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T11 2249-2278 Chemical denotes Tenofovir disoproxil fumarate http://purl.obolibrary.org/obo/CHEBI_63718
T12 2270-2278 Chemical denotes fumarate http://purl.obolibrary.org/obo/CHEBI_29806
T13 2280-2283 Chemical denotes TDF http://purl.obolibrary.org/obo/CHEBI_63718
T14 2286-2309 Chemical denotes anti-inflammatory drugs http://purl.obolibrary.org/obo/CHEBI_35472
T15 2304-2309 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T16 2319-2327 Chemical denotes hormones http://purl.obolibrary.org/obo/CHEBI_24621
T17 2338-2347 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T18 2380-2383 Chemical denotes TCM http://purl.obolibrary.org/obo/CHEBI_145500
T19 2536-2541 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T20 2604-2615 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T21 2616-2625 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474
T25 2684-2692 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 2215-2228 http://purl.obolibrary.org/obo/GO_0032774 denotes RNA synthesis
T5 2219-2228 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T48 0-10 Sentence denotes Challenges
T49 11-115 Sentence denotes It is the first time for the COVID-19 to infect humans and can be transmitted from person to person [6].
T50 116-173 Sentence denotes The incubation period can be 2 weeks [7] and even longer.
T51 174-361 Sentence denotes Besides, the virus can spread during the incubation period or recessive infection, which makes it difficult to identify those suspected cases without clinical symptoms for prompt control.
T52 362-475 Sentence denotes By far, the numbers of new infections and deaths have already exceeded the equivalent numbers of cases with SARS.
T53 476-618 Sentence denotes If the situation cannot be fully controlled in Wuhan and Hubei province, the situation may deteriorate in other places of China and the world.
T54 619-763 Sentence denotes The government of all levels have been taking strong leadership to combat the outbreak and in recent days there is a decline trend of new cases.
T55 764-827 Sentence denotes However, some challenges still remain and need to be addressed:
T56 828-1001 Sentence denotes The large number of confirmed and suspected cases in Wuhan make people staying with them in high risk of getting infected because of the contagiousness of the new virus [8].
T57 1002-1055 Sentence denotes This is specially the case for medical professionals.
T58 1056-1161 Sentence denotes By February 11, 2020, 1716 medical personnel have been infected and six of them died from all over China.
T59 1162-1299 Sentence denotes Moreover, it is very difficult to identify those people without obvious symptoms, making their families in high risk of getting infected.
T60 1300-1413 Sentence denotes Hospitals have drastically constrained other services to meet the hospitalization needs of the outbreak in Wuhan.
T61 1414-1581 Sentence denotes At the early stage, with more people getting infected and less of them recovered, medical facilities, personnel and protective supplies were increasingly insufficient.
T62 1582-1699 Sentence denotes In many cases, patients cannot be quarantined and treated in time, and many medical staff cannot get fully protected.
T63 1700-1862 Sentence denotes More efficient logistic services are expected to deliver donated materials from both China and the international society to medical professionals and communities.
T64 1863-1998 Sentence denotes However, these are all operating problems and the situation has much alleviated with the strong leadership of government of all levels.
T65 1999-2062 Sentence denotes Effective drugs have yet to be developed to treat the COVID-19.
T66 2063-2594 Sentence denotes Temporarily, Lopinavir/Ritonavir, Nucleoside analogues (e.g. ribavirin), Neuraminidase inhibitors (e.g. oseltamivir), Remdesivir, abidol hydrochloride, RNA synthesis inhibitors (such as Tenofovir disoproxil fumarate, TDF), anti-inflammatory drugs (such as hormones and other molecules), Traditional Chinese Medicine (TCM), such Shu Feng Jie Du Capsules and Lian Hua Qing Wen Capsule, are being used as treatment options for COVID-19, but their efficacy and safety of these drugs are yet to be clinically observed in treatments [9].
T67 2595-2759 Sentence denotes Besides, chloroquine phosphate has recently been recommended by the clinical diagnostics solution (6th edition) released by the National Health Commission of China.