PMC:7045880 / 4939-5743
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 131 | 92-100 | Species | denotes | patients | Tax:9606 |
| 132 | 650-660 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 133 | 213-221 | Chemical | denotes | Nystadin | |
| 134 | 223-233 | Chemical | denotes | penicillin | MESH:D010406 |
| 135 | 234-246 | Chemical | denotes | streptomycin | MESH:D013307 |
| 136 | 396-399 | Chemical | denotes | CO2 | MESH:D002245 |
| 137 | 406-440 | Chemical | denotes | Dulbecco’s modified Eagle’s medium | |
| 138 | 442-446 | Chemical | denotes | DMEM | |
| 139 | 492-502 | Chemical | denotes | penicillin | MESH:D010406 |
| 140 | 503-515 | Chemical | denotes | streptomycin | MESH:D013307 |
| 141 | 83-91 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 341-346 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T24 | 364-369 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T25 | 482-487 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T26 | 592-596 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T5 | 482-487 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T26 | 83-91 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T27 | 650-658 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T41 | 4-9 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T42 | 247-250 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 1:1 |
| T43 | 261-265 | http://purl.obolibrary.org/obo/CLO_0001757 | denotes | at 1 |
| T44 | 302-305 | http://purl.obolibrary.org/obo/CLO_0001387 | denotes | 4°C |
| T45 | 336-340 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T46 | 336-340 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T47 | 341-346 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T48 | 359-363 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T49 | 359-363 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T50 | 364-369 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T51 | 390-394 | http://purl.obolibrary.org/obo/CLO_0002131 | denotes | C, 5 |
| T52 | 517-522 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T53 | 592-596 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T54 | 678-679 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T16 | 200-211 | Chemical | denotes | antibiotics | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T17 | 223-233 | Chemical | denotes | penicillin | http://purl.obolibrary.org/obo/CHEBI_17334|http://purl.obolibrary.org/obo/CHEBI_51356 |
| T19 | 234-246 | Chemical | denotes | streptomycin | http://purl.obolibrary.org/obo/CHEBI_17076|http://purl.obolibrary.org/obo/CHEBI_58007 |
| T21 | 396-399 | Chemical | denotes | CO2 | http://purl.obolibrary.org/obo/CHEBI_16526 |
| T22 | 492-502 | Chemical | denotes | penicillin | http://purl.obolibrary.org/obo/CHEBI_17334|http://purl.obolibrary.org/obo/CHEBI_51356 |
| T24 | 503-515 | Chemical | denotes | streptomycin | http://purl.obolibrary.org/obo/CHEBI_17076|http://purl.obolibrary.org/obo/CHEBI_58007 |
| T26 | 612-620 | Chemical | denotes | electron | http://purl.obolibrary.org/obo/CHEBI_10545 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T48 | 0-101 | Sentence | denotes | The virus was isolated from nasopharyngeal and oropharyngeal samples from putative COVID-19 patients. |
| T49 | 102-347 | Sentence | denotes | Oropharyngeal samples were diluted with viral transfer medium containing nasopharyngeal swabs and antibiotics (Nystadin, penicillin-streptomycin 1:1 dilution) at 1:4 ratio and incubated for 1 hour at 4°C, before being inoculated onto Vero cells. |
| T50 | 348-516 | Sentence | denotes | Inoculated Vero cells were cultured at 37°C, 5% CO2 in 1× Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 2% fetal bovine serum and penicillin-streptomycin. |
| T51 | 517-632 | Sentence | denotes | Virus replication and isolation were confirmed through cytopathic effects, gene detection, and electron microscopy. |
| T52 | 633-804 | Sentence | denotes | Viral culture of SARS-CoV-2 was conducted in a biosafety Level-3 facility according to laboratory biosafety guidelines of Korea Centers for Disease Control and Prevention. |