PMC:7045880 / 11159-12096
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 238 | 30-47 | Species | denotes | novel coronavirus | Tax:2697049 |
| 239 | 96-106 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 240 | 119-124 | Species | denotes | human | Tax:9606 |
| 241 | 125-138 | Species | denotes | coronaviruses | Tax:11118 |
| 242 | 144-148 | Species | denotes | CoVs | Tax:11118 |
| 243 | 157-167 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 244 | 344-359 | Species | denotes | new coronavirus | Tax:2697049 |
| 245 | 361-371 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 246 | 390-405 | Species | denotes | betacoronavirus | Tax:694002 |
| 247 | 604-607 | Species | denotes | CoV | Tax:11118 |
| 248 | 626-634 | Species | denotes | SARS-CoV | Tax:694009 |
| 249 | 650-658 | Species | denotes | MERS-CoV | Tax:1335626 |
| 250 | 767-774 | Species | denotes | BetaCoV | Tax:694002 |
| 251 | 532-567 | Disease | denotes | IVDC-HB-01/2019(GISAID accession ID | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T42 | 96-104 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 157-165 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T44 | 361-369 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T45 | 626-634 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T130 | 119-124 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T131 | 246-247 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T132 | 537-539 | http://purl.obolibrary.org/obo/CLO_0003622 | denotes | HB |
| T133 | 600-603 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T134 | 609-612 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T135 | 872-875 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T63 | 565-567 | Chemical | denotes | ID | http://purl.obolibrary.org/obo/CHEBI_141439 |
| T64 | 613-615 | Chemical | denotes | SL | http://purl.obolibrary.org/obo/CHEBI_74815 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 0-279 | Sentence | denotes | The sequence of the suspected novel coronavirus (KCDC03) was analyzed using the sequences of 54 SARS-CoV-2 including 6 human coronaviruses, Bat-CoVs, and 51 SARS-CoV-2 that have been registered in GISAID by several countries including China, and a phylogenetic tree was produced. |
| T103 | 280-406 | Sentence | denotes | Results show that the isolate from Korea was clustered with the new coronavirus, SARS-CoV-2 and classified as betacoronavirus. |
| T104 | 407-585 | Sentence | denotes | High homology (99.94%–99.99%) was confirmed with the viral sequences reported from other countries, such as those from Wuhan/IVDC-HB-01/2019(GISAID accession ID: EPI_ISL_402119). |
| T105 | 586-710 | Sentence | denotes | Homology with bat CoV (bat-SL-CoVZC45), SARS-CoV (AY278741) and MERS-CoV (JX869059) was 89.1%, 77.5%, and 50%, respectively. |
| T106 | 711-937 | Sentence | denotes | However, the lowest homology of 99.5% was observed with BetaCoV/Wuwhan/IVDCHB-04/2020, which could be because of the inaccurate sequence of IVDCHB-04, Hence, it has been excluded from the comparative analysis in other studies. |