PMC:7045880 / 10124-11158
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 209 | 150-160 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 210 | 188-195 | Species | denotes | patient | Tax:9606 |
| 211 | 286-293 | Species | denotes | patient | Tax:9606 |
| 212 | 397-407 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 213 | 522-532 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 214 | 574-579 | Species | denotes | human | Tax:9606 |
| 215 | 653-660 | Species | denotes | patient | Tax:9606 |
| 216 | 688-693 | Species | denotes | human | Tax:9606 |
| 217 | 849-859 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 218 | 39-47 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 219 | 275-280 | Disease | denotes | fever | MESH:D005334 |
| 220 | 323-331 | Disease | denotes | coughing | MESH:D003371 |
| 221 | 666-675 | Disease | denotes | pneumonia | MESH:D011014 |
| 222 | 452-459 | CellLine | denotes | Caco-II | CVCL:0025 |
| 223 | 880-887 | CellLine | denotes | Caco-II | CVCL:0025 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T54 | 337-343 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T55 | 433-438 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T56 | 460-465 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T57 | 488-493 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T58 | 587-603 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T59 | 598-603 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T60 | 701-717 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T61 | 712-717 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T62 | 780-790 | Body_part | denotes | epithelium | http://purl.org/sig/ont/fma/fma9639 |
| T63 | 871-876 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T64 | 888-893 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T65 | 966-970 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T6 | 337-343 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T7 | 780-790 | Body_part | denotes | epithelium | http://purl.obolibrary.org/obo/UBERON_0000483 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T36 | 39-47 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T37 | 150-158 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T38 | 397-405 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T39 | 522-530 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T40 | 666-675 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T41 | 849-857 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T105 | 109-110 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T106 | 179-180 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T107 | 433-438 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T108 | 440-444 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T109 | 440-444 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T110 | 460-465 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T111 | 483-487 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T112 | 483-487 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T113 | 488-493 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T114 | 574-579 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T115 | 580-586 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T116 | 587-597 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T117 | 598-603 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T118 | 651-652 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T119 | 688-693 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T120 | 694-700 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T121 | 701-711 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T122 | 712-717 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T123 | 780-790 | http://purl.obolibrary.org/obo/UBERON_0000483 | denotes | epithelium |
| T124 | 866-870 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T125 | 866-870 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T126 | 871-876 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T127 | 888-893 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T128 | 966-976 | http://purl.obolibrary.org/obo/CLO_0000031 | denotes | cell lines |
| T129 | 990-995 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T61 | 457-459 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T62 | 885-887 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32149036-31978945-81764453 | 677-679 | 31978945 | denotes | 16 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T95 | 0-145 | Sentence | denotes | As of February 12th, 2020, 28 cases of COVID-19 have been reported in Korea, with the first case observed in a traveler residing in Wuhan, China. |
| T96 | 146-281 | Sentence | denotes | The SARS-CoV-2 was isolated from a Korean patient who had self-administered antipyretics for initial symptoms such as chills and fever. |
| T97 | 282-392 | Sentence | denotes | The patient had experienced intermittent coughing with sputum 3 days after the administration of antipyretics. |
| T98 | 393-511 | Sentence | denotes | The SARS-CoV-2 could replicate in other cells (Vero E6 and Caco-II cells), in addition to Vero cells (data not shown). |
| T99 | 512-681 | Sentence | denotes | The first SARS-CoV-2 was successfully isolated by inoculating human airway epithelial cells with bronchoalveolar-lavage fluid samples from a patient with pneumonia [16]. |
| T100 | 682-913 | Sentence | denotes | Since human airway epithelial cells (because of their resemblance to pseudostratified mucociliary epithelium) require 4–6 weeks to differentiate in vivo, isolation of SARS-CoV-2 using Vero cells or Caco-II cells is more convenient. |
| T101 | 914-1034 | Sentence | denotes | Further studies are needed to select more sensitive cell lines suitable for virus isolation from low viral load samples. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T9 | 264-270 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T10 | 275-280 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T11 | 323-331 | Phenotype | denotes | coughing | http://purl.obolibrary.org/obo/HP_0012735 |
| T12 | 666-675 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |