PMC:7039956 / 64-657
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 17 | 57-61 | Gene | denotes | ACE2 | Gene:59272 |
| 22 | 465-469 | Gene | denotes | CAGE | Gene:168400 |
| 23 | 96-105 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 24 | 407-416 | Species | denotes | Mammalian | Tax:9606 |
| 26 | 186-195 | Disease | denotes | infection | MESH:D007239 |
| 27 | 235-254 | Disease | denotes | 2019-nCov infection | MESH:C000657245 |
| 28 | 347-353 | Disease | denotes | Cancer | MESH:D009369 |
| 29 | 541-555 | Disease | denotes | para-carcinoma | MESH:D002277 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 0-5 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T3 | 9-20 | Body_part | denotes | oral mucosa | http://purl.org/sig/ont/fma/fma59660 |
| T4 | 14-20 | Body_part | denotes | mucosa | http://purl.org/sig/ont/fma/fma85355 |
| T5 | 79-83 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T6 | 162-166 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T7 | 262-268 | Body_part | denotes | mucosa | http://purl.org/sig/ont/fma/fma85355 |
| T8 | 272-283 | Body_part | denotes | oral cavity | http://purl.org/sig/ont/fma/fma20292 |
| T9 | 290-293 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T10 | 354-360 | Body_part | denotes | Genome | http://purl.org/sig/ont/fma/fma84116 |
| T11 | 417-423 | Body_part | denotes | Genome | http://purl.org/sig/ont/fma/fma84116 |
| T12 | 440-444 | Body_part | denotes | Gene | http://purl.org/sig/ont/fma/fma74402 |
| T13 | 495-498 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T14 | 524-529 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
| T15 | 563-570 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
| T16 | 588-593 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 14-20 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
| T2 | 262-268 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
| T3 | 272-283 | Body_part | denotes | oral cavity | http://purl.obolibrary.org/obo/UBERON_0000167 |
| T4 | 524-529 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
| T5 | 588-593 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 347-353 | Phenotype | denotes | Cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T2 | 546-555 | Phenotype | denotes | carcinoma | http://purl.obolibrary.org/obo/HP_0030731 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 186-195 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T2 | 235-254 | Disease | denotes | 2019-nCov infection | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T3 | 245-254 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T4 | 347-353 | Disease | denotes | Cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T5 | 546-555 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 0-5 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T3 | 14-20 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
| T4 | 34-37 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T5 | 79-83 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T6 | 116-117 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T7 | 147-152 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T8 | 162-166 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T9 | 262-268 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
| T10 | 272-283 | http://purl.obolibrary.org/obo/UBERON_0000167 | denotes | oral cavity |
| T11 | 272-283 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | oral cavity |
| T12 | 440-444 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Gene |
| T13 | 524-529 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
| T14 | 588-593 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 440-455 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | Gene Expression |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 22-30 | Sentence | denotes | Abstract |
| T3 | 31-196 | Sentence | denotes | It has been reported that ACE2 is the main host cell receptor of 2019-nCoV and plays a crucial role in the entry of virus into the cell to cause the final infection. |
| T4 | 197-494 | Sentence | denotes | To investigate the potential route of 2019-nCov infection on the mucosa of oral cavity, bulk RNA-seq profiles from two public databases including The Cancer Genome Atlas (TCGA) and Functional Annotation of The Mammalian Genome Cap Analysis of Gene Expression (FANTOM5 CAGE) dataset were collected. |