PMC:7039956 / 41-634
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 17 | 80-84 | Gene | denotes | ACE2 | Gene:59272 |
| 22 | 488-492 | Gene | denotes | CAGE | Gene:168400 |
| 23 | 119-128 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 24 | 430-439 | Species | denotes | Mammalian | Tax:9606 |
| 26 | 209-218 | Disease | denotes | infection | MESH:D007239 |
| 27 | 258-277 | Disease | denotes | 2019-nCov infection | MESH:C000657245 |
| 28 | 370-376 | Disease | denotes | Cancer | MESH:D009369 |
| 29 | 564-578 | Disease | denotes | para-carcinoma | MESH:D002277 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 12-28 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T2 | 23-28 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T3 | 32-43 | Body_part | denotes | oral mucosa | http://purl.org/sig/ont/fma/fma59660 |
| T4 | 37-43 | Body_part | denotes | mucosa | http://purl.org/sig/ont/fma/fma85355 |
| T5 | 102-106 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T6 | 185-189 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T7 | 285-291 | Body_part | denotes | mucosa | http://purl.org/sig/ont/fma/fma85355 |
| T8 | 295-306 | Body_part | denotes | oral cavity | http://purl.org/sig/ont/fma/fma20292 |
| T9 | 313-316 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T10 | 377-383 | Body_part | denotes | Genome | http://purl.org/sig/ont/fma/fma84116 |
| T11 | 440-446 | Body_part | denotes | Genome | http://purl.org/sig/ont/fma/fma84116 |
| T12 | 463-467 | Body_part | denotes | Gene | http://purl.org/sig/ont/fma/fma74402 |
| T13 | 518-521 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T14 | 547-552 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
| T15 | 586-593 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 37-43 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
| T2 | 285-291 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
| T3 | 295-306 | Body_part | denotes | oral cavity | http://purl.obolibrary.org/obo/UBERON_0000167 |
| T4 | 547-552 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 370-376 | Phenotype | denotes | Cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T2 | 569-578 | Phenotype | denotes | carcinoma | http://purl.obolibrary.org/obo/HP_0030731 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 209-218 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T2 | 258-277 | Disease | denotes | 2019-nCov infection | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T3 | 268-277 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T4 | 370-376 | Disease | denotes | Cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T5 | 569-578 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-22 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T2 | 23-28 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T3 | 37-43 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
| T4 | 57-60 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T5 | 102-106 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T6 | 139-140 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T7 | 170-175 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T8 | 185-189 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T9 | 285-291 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
| T10 | 295-306 | http://purl.obolibrary.org/obo/UBERON_0000167 | denotes | oral cavity |
| T11 | 295-306 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | oral cavity |
| T12 | 463-467 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Gene |
| T13 | 547-552 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 463-478 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | Gene Expression |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 45-53 | Sentence | denotes | Abstract |
| T3 | 54-219 | Sentence | denotes | It has been reported that ACE2 is the main host cell receptor of 2019-nCoV and plays a crucial role in the entry of virus into the cell to cause the final infection. |
| T4 | 220-517 | Sentence | denotes | To investigate the potential route of 2019-nCov infection on the mucosa of oral cavity, bulk RNA-seq profiles from two public databases including The Cancer Genome Atlas (TCGA) and Functional Annotation of The Mammalian Genome Cap Analysis of Gene Expression (FANTOM5 CAGE) dataset were collected. |