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PMC:7039956 / 14561-15063 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
377 310-314 Gene denotes ACE2 Gene:59272
378 153-157 Gene denotes CAGE Gene:168400
379 95-104 Species denotes Mammalian Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T259 14-17 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T260 37-44 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T261 105-111 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T262 128-132 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T263 252-258 Body_part denotes tongue http://purl.org/sig/ont/fma/fma54640
T264 282-287 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T265 329-340 Body_part denotes oral cavity http://purl.org/sig/ont/fma/fma20292
T266 366-371 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T267 373-378 Body_part denotes ovary http://purl.org/sig/ont/fma/fma7209
T268 380-386 Body_part denotes breast http://purl.org/sig/ont/fma/fma9601
T269 388-398 Body_part denotes cerebellum http://purl.org/sig/ont/fma/fma67944
T270 400-410 Body_part denotes epididymis http://purl.org/sig/ont/fma/fma18255
T271 412-421 Body_part denotes esophagus http://purl.org/sig/ont/fma/fma7131
T272 423-434 Body_part denotes gallbladder http://purl.org/sig/ont/fma/fma7202
T273 436-448 Body_part denotes heart muscle http://purl.org/sig/ont/fma/fma9462
T274 450-456 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T275 458-463 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T276 465-469 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T277 471-479 Body_part denotes pancreas http://purl.org/sig/ont/fma/fma7198
T278 481-489 Body_part denotes prostate http://purl.org/sig/ont/fma/fma9600
T279 495-501 Body_part denotes tongue http://purl.org/sig/ont/fma/fma54640

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T105 252-258 Body_part denotes tongue http://purl.obolibrary.org/obo/UBERON_0001723
T106 282-287 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T107 329-340 Body_part denotes oral cavity http://purl.obolibrary.org/obo/UBERON_0000167
T108 366-371 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155
T109 380-386 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T110 388-398 Body_part denotes cerebellum http://purl.obolibrary.org/obo/UBERON_0002037
T111 400-410 Body_part denotes epididymis http://purl.obolibrary.org/obo/UBERON_0001301
T112 412-421 Body_part denotes esophagus http://purl.obolibrary.org/obo/UBERON_0001043
T113 436-441 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T114 450-456 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T115 458-463 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T116 465-469 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T117 471-479 Body_part denotes pancreas http://purl.obolibrary.org/obo/UBERON_0001264
T118 495-501 Body_part denotes tongue http://purl.obolibrary.org/obo/UBERON_0001723

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T45 400-410 Disease denotes epididymis http://purl.obolibrary.org/obo/MONDO_0004779
T46 471-479 Disease denotes pancreas http://purl.obolibrary.org/obo/MONDO_0021040

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T271 128-132 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T272 252-258 http://purl.obolibrary.org/obo/UBERON_0001723 denotes tongue
T273 282-287 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T274 329-340 http://purl.obolibrary.org/obo/UBERON_0000167 denotes oral cavity
T275 329-340 http://www.ebi.ac.uk/efo/EFO_0000825 denotes oral cavity
T276 366-371 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T277 373-378 http://www.ebi.ac.uk/efo/EFO_0000973 denotes ovary
T278 380-386 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
T279 388-398 http://purl.obolibrary.org/obo/UBERON_0002037 denotes cerebellum
T280 412-421 http://purl.obolibrary.org/obo/UBERON_0001043 denotes esophagus
T281 436-441 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T282 436-441 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T283 436-441 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T284 436-441 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T285 442-448 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T286 442-448 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T287 442-448 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T288 442-448 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T289 450-456 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T290 450-456 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T291 450-456 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T292 458-463 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T293 458-463 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T294 465-469 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T295 465-469 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T296 471-479 http://purl.obolibrary.org/obo/UBERON_0001264 denotes pancreas
T297 495-501 http://purl.obolibrary.org/obo/UBERON_0001723 denotes tongue

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 128-143 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene Expression

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T91 0-502 Sentence denotes Besides, Bulk RNA-seq data of normal tissues were downloaded from Functional Annotation of The Mammalian Genome Cap Analysis of Gene Expression (FANTOM5 CAGE) dataset25, as only two samples of this dataset which owns 60 samples in total located in the tongue, we just downloaded 14 organ types to validate the ACE2 expression in oral cavity with bar plot, including colon, ovary, breast, cerebellum, epididymis, esophagus, gallbladder, heart muscle, kidney, liver, lung, pancreas, prostate, and tongue.