
PMC:7039956 / 13682-14560
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
368 | 740-744 | Gene | denotes | ACE2 | Gene:59272 |
369 | 816-820 | Gene | denotes | ACE2 | Gene:59272 |
370 | 21-35 | Disease | denotes | para-carcinoma | MESH:D002277 |
371 | 127-133 | Disease | denotes | Cancer | MESH:D009369 |
372 | 166-172 | Disease | denotes | cancer | MESH:D009369 |
373 | 192-206 | Disease | denotes | para-carcinoma | MESH:D002277 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T227 | 5-8 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T228 | 43-50 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T229 | 79-86 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T230 | 134-140 | Body_part | denotes | Genome | http://purl.org/sig/ont/fma/fma84116 |
T231 | 214-221 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T232 | 299-308 | Body_part | denotes | intestine | http://purl.org/sig/ont/fma/fma7199 |
T233 | 313-320 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T234 | 323-329 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T235 | 335-342 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T236 | 345-352 | Body_part | denotes | stomach | http://purl.org/sig/ont/fma/fma7148 |
T237 | 357-364 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T238 | 367-376 | Body_part | denotes | bile duct | http://purl.org/sig/ont/fma/fma9706 |
T239 | 380-387 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T240 | 390-395 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T241 | 400-407 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T242 | 410-421 | Body_part | denotes | oral cavity | http://purl.org/sig/ont/fma/fma20292 |
T243 | 426-433 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T244 | 436-440 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T245 | 446-453 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T246 | 456-463 | Body_part | denotes | thyroid | http://purl.org/sig/ont/fma/fma9603 |
T247 | 468-475 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T248 | 478-487 | Body_part | denotes | esophagus | http://purl.org/sig/ont/fma/fma7131 |
T249 | 492-499 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T250 | 502-509 | Body_part | denotes | bladder | http://purl.org/sig/ont/fma/fma15900 |
T251 | 514-521 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T252 | 524-530 | Body_part | denotes | breast | http://purl.org/sig/ont/fma/fma9601 |
T253 | 536-543 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T254 | 546-552 | Body_part | denotes | uterus | http://purl.org/sig/ont/fma/fma17558 |
T255 | 557-564 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T256 | 571-579 | Body_part | denotes | prostate | http://purl.org/sig/ont/fma/fma9600 |
T257 | 584-591 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T258 | 598-601 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T89 | 247-253 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
T90 | 299-308 | Body_part | denotes | intestine | http://purl.obolibrary.org/obo/UBERON_0000160 |
T91 | 323-329 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T92 | 345-352 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/UBERON_0000945 |
T93 | 367-376 | Body_part | denotes | bile duct | http://purl.obolibrary.org/obo/UBERON_0002394 |
T94 | 367-371 | Body_part | denotes | bile | http://purl.obolibrary.org/obo/UBERON_0001970 |
T95 | 372-376 | Body_part | denotes | duct | http://purl.obolibrary.org/obo/UBERON_0000058 |
T96 | 390-395 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T97 | 410-421 | Body_part | denotes | oral cavity | http://purl.obolibrary.org/obo/UBERON_0000167 |
T98 | 436-440 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T99 | 456-463 | Body_part | denotes | thyroid | http://purl.obolibrary.org/obo/UBERON_0002046 |
T100 | 478-487 | Body_part | denotes | esophagus | http://purl.obolibrary.org/obo/UBERON_0001043 |
T101 | 502-509 | Body_part | denotes | bladder | http://purl.obolibrary.org/obo/UBERON_0001255 |
T102 | 524-530 | Body_part | denotes | breast | http://purl.obolibrary.org/obo/UBERON_0000310 |
T103 | 546-552 | Body_part | denotes | uterus | http://purl.obolibrary.org/obo/UBERON_0000995 |
T104 | 772-778 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T20 | 26-35 | Phenotype | denotes | carcinoma | http://purl.obolibrary.org/obo/HP_0030731 |
T21 | 127-133 | Phenotype | denotes | Cancer | http://purl.obolibrary.org/obo/HP_0002664 |
T22 | 197-206 | Phenotype | denotes | carcinoma | http://purl.obolibrary.org/obo/HP_0030731 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T42 | 26-35 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
T43 | 127-133 | Disease | denotes | Cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
T44 | 197-206 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T249 | 247-253 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organs |
T250 | 299-308 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestine |
T251 | 299-308 | http://www.ebi.ac.uk/efo/EFO_0000834 | denotes | intestine |
T252 | 323-329 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T253 | 323-329 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T254 | 323-329 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T255 | 354-356 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T256 | 367-376 | http://purl.obolibrary.org/obo/UBERON_0002394 | denotes | bile duct |
T257 | 390-395 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T258 | 390-395 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T259 | 410-421 | http://purl.obolibrary.org/obo/UBERON_0000167 | denotes | oral cavity |
T260 | 410-421 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | oral cavity |
T261 | 436-440 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T262 | 436-440 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T263 | 478-487 | http://purl.obolibrary.org/obo/UBERON_0001043 | denotes | esophagus |
T264 | 489-491 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T265 | 524-530 | http://purl.obolibrary.org/obo/UBERON_0000310 | denotes | breast |
T266 | 546-552 | http://purl.obolibrary.org/obo/UBERON_0000995 | denotes | uterus |
T267 | 546-552 | http://www.ebi.ac.uk/efo/EFO_0000975 | denotes | uterus |
T268 | 581-583 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
T269 | 772-778 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organs |
T270 | 782-790 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test was |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T88 | 0-593 | Sentence | denotes | Bulk RNA-seq data of para-carcinoma normal tissues which were taken as control tissues in the studies were downloaded from The Cancer Genome Atlas (TCGA; https://www.cancer.gov/tcga), and 695 para-carcinoma normal tissues distributed in different organs were obtained for this study, which included intestine (51 tissues), kidney (129 tissues), stomach (35 tissues), bile duct (9 tissues), liver (50 tissues), oral cavity (32 tissues), lung (110 tissues), thyroid (59 tissues), esophagus (11 tissues), bladder (19 tissues), breast (113 tissues), uterus (25 tissues), and prostate (52 tissues). |
T89 | 594-690 | Sentence | denotes | The RNA-seq data were batch effects normalized and log2-transformed for the subsequent analysis. |
T90 | 691-878 | Sentence | denotes | Violin plot was used to show the distribution of ACE2 expression among different organs, t test was performed to compare the ACE2 expression between two different groups shown in boxplot. |