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PMC:7039956 / 13682-14560 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
368 740-744 Gene denotes ACE2 Gene:59272
369 816-820 Gene denotes ACE2 Gene:59272
370 21-35 Disease denotes para-carcinoma MESH:D002277
371 127-133 Disease denotes Cancer MESH:D009369
372 166-172 Disease denotes cancer MESH:D009369
373 192-206 Disease denotes para-carcinoma MESH:D002277

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T227 5-8 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T228 43-50 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T229 79-86 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T230 134-140 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T231 214-221 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T232 299-308 Body_part denotes intestine http://purl.org/sig/ont/fma/fma7199
T233 313-320 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T234 323-329 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T235 335-342 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T236 345-352 Body_part denotes stomach http://purl.org/sig/ont/fma/fma7148
T237 357-364 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T238 367-376 Body_part denotes bile duct http://purl.org/sig/ont/fma/fma9706
T239 380-387 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T240 390-395 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T241 400-407 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T242 410-421 Body_part denotes oral cavity http://purl.org/sig/ont/fma/fma20292
T243 426-433 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T244 436-440 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T245 446-453 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T246 456-463 Body_part denotes thyroid http://purl.org/sig/ont/fma/fma9603
T247 468-475 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T248 478-487 Body_part denotes esophagus http://purl.org/sig/ont/fma/fma7131
T249 492-499 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T250 502-509 Body_part denotes bladder http://purl.org/sig/ont/fma/fma15900
T251 514-521 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T252 524-530 Body_part denotes breast http://purl.org/sig/ont/fma/fma9601
T253 536-543 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T254 546-552 Body_part denotes uterus http://purl.org/sig/ont/fma/fma17558
T255 557-564 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T256 571-579 Body_part denotes prostate http://purl.org/sig/ont/fma/fma9600
T257 584-591 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T258 598-601 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T89 247-253 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062
T90 299-308 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T91 323-329 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T92 345-352 Body_part denotes stomach http://purl.obolibrary.org/obo/UBERON_0000945
T93 367-376 Body_part denotes bile duct http://purl.obolibrary.org/obo/UBERON_0002394
T94 367-371 Body_part denotes bile http://purl.obolibrary.org/obo/UBERON_0001970
T95 372-376 Body_part denotes duct http://purl.obolibrary.org/obo/UBERON_0000058
T96 390-395 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T97 410-421 Body_part denotes oral cavity http://purl.obolibrary.org/obo/UBERON_0000167
T98 436-440 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T99 456-463 Body_part denotes thyroid http://purl.obolibrary.org/obo/UBERON_0002046
T100 478-487 Body_part denotes esophagus http://purl.obolibrary.org/obo/UBERON_0001043
T101 502-509 Body_part denotes bladder http://purl.obolibrary.org/obo/UBERON_0001255
T102 524-530 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T103 546-552 Body_part denotes uterus http://purl.obolibrary.org/obo/UBERON_0000995
T104 772-778 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T20 26-35 Phenotype denotes carcinoma http://purl.obolibrary.org/obo/HP_0030731
T21 127-133 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T22 197-206 Phenotype denotes carcinoma http://purl.obolibrary.org/obo/HP_0030731

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T42 26-35 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T43 127-133 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T44 197-206 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T249 247-253 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T250 299-308 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestine
T251 299-308 http://www.ebi.ac.uk/efo/EFO_0000834 denotes intestine
T252 323-329 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T253 323-329 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T254 323-329 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T255 354-356 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T256 367-376 http://purl.obolibrary.org/obo/UBERON_0002394 denotes bile duct
T257 390-395 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T258 390-395 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T259 410-421 http://purl.obolibrary.org/obo/UBERON_0000167 denotes oral cavity
T260 410-421 http://www.ebi.ac.uk/efo/EFO_0000825 denotes oral cavity
T261 436-440 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T262 436-440 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T263 478-487 http://purl.obolibrary.org/obo/UBERON_0001043 denotes esophagus
T264 489-491 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T265 524-530 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
T266 546-552 http://purl.obolibrary.org/obo/UBERON_0000995 denotes uterus
T267 546-552 http://www.ebi.ac.uk/efo/EFO_0000975 denotes uterus
T268 581-583 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T269 772-778 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T270 782-790 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test was

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T88 0-593 Sentence denotes Bulk RNA-seq data of para-carcinoma normal tissues which were taken as control tissues in the studies were downloaded from The Cancer Genome Atlas (TCGA; https://www.cancer.gov/tcga), and 695 para-carcinoma normal tissues distributed in different organs were obtained for this study, which included intestine (51 tissues), kidney (129 tissues), stomach (35 tissues), bile duct (9 tissues), liver (50 tissues), oral cavity (32 tissues), lung (110 tissues), thyroid (59 tissues), esophagus (11 tissues), bladder (19 tissues), breast (113 tissues), uterus (25 tissues), and prostate (52 tissues).
T89 594-690 Sentence denotes The RNA-seq data were batch effects normalized and log2-transformed for the subsequent analysis.
T90 691-878 Sentence denotes Violin plot was used to show the distribution of ACE2 expression among different organs, t test was performed to compare the ACE2 expression between two different groups shown in boxplot.