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PMC:7039910 / 1979-3051 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
48 0-22 Species denotes 2019 Novel coronavirus Tax:2697049
49 24-33 Species denotes 2019-nCoV Tax:2697049
50 34-44 Species denotes SARS-CoV-2 Tax:2697049
51 336-344 Species denotes Patients Tax:9606
52 799-805 Species denotes People Tax:9606
53 79-94 Disease denotes viral pneumonia
54 193-217 Disease denotes Coronavirus Disease 2019 MESH:C000657245
55 219-227 Disease denotes COVID-19 MESH:C000657245
56 385-390 Disease denotes fever MESH:D005334
57 392-397 Disease denotes cough MESH:D003371
58 399-418 Disease denotes shortness of breath MESH:D004417
59 420-431 Disease denotes muscle ache MESH:D063806
60 444-452 Disease denotes headache MESH:D006261
61 454-465 Disease denotes sore throat MESH:D010608
62 467-478 Disease denotes rhinorrhoea
63 480-490 Disease denotes chest pain MESH:D002637
64 492-500 Disease denotes diarrhea MESH:D003967
65 506-512 Disease denotes nausea MESH:D009325
66 517-525 Disease denotes vomiting MESH:D014839
67 699-705 Disease denotes deaths MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 420-426 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558
T2 459-465 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T3 480-485 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 459-465 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T2 480-485 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 85-94 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 385-390 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T4 392-397 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T5 399-418 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T6 420-431 Phenotype denotes muscle ache http://purl.obolibrary.org/obo/HP_0003326
T7 444-452 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T8 454-465 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T9 480-490 Phenotype denotes chest pain http://purl.obolibrary.org/obo/HP_0100749
T10 492-500 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T11 506-512 Phenotype denotes nausea http://purl.obolibrary.org/obo/HP_0002018

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 34-42 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 79-94 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T17 85-94 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T18 193-217 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T19 219-227 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 454-465 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T21 492-500 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 46-49 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T3 148-160 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T4 171-174 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T5 420-426 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T6 420-426 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T7 420-426 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T8 420-426 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T9 480-485 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T10 554-555 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 672-673 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 996-999 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T13 1020-1021 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 827-830 Chemical denotes NHC http://purl.obolibrary.org/obo/CHEBI_51369

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 0-134 Sentence denotes 2019 Novel coronavirus (2019-nCoV/SARS-CoV-2) has given rise to an outbreak of viral pneumonia in Wuhan, China since December 20191,2.
T17 135-230 Sentence denotes World Health Organization (WHO) now has named the disease Coronavirus Disease 2019 (COVID-19)3.
T18 231-335 Sentence denotes Most cases from the initial cluster had an epidemiological link to the Huanan Seafood Wholesale Market4.
T19 336-529 Sentence denotes Patients have clinical manifestations, including fever, cough, shortness of breath, muscle ache, confusion, headache, sore throat, rhinorrhoea, chest pain, diarrhea, and nausea and vomiting5,6.
T20 530-851 Sentence denotes As of 17 February 2020, a cumulative total of 72,436 confirmed cases (including 11,741 currently severe cases), 6242 currently suspect cases, a cumulative total of 1868 deaths and 12,552 cases discharged from hospital were reported by National Health Commission of the People’s Republic of China (NHC) in mainland China7.
T21 852-1072 Sentence denotes The significant increases in the number of confirmed cases in China and abroad led to the announcement made by WHO on 30 January that the event has already constituted a Public Health Emergency of International Concern8.

2_test

Id Subject Object Predicate Lexical cue
32133152-31953166-19616451 525-526 31953166 denotes 5