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PMC:7039716 / 1936-3316 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
58 685-692 Species denotes patient Tax:9606
59 1047-1055 Species denotes patients Tax:9606
60 28-43 Disease denotes viral infection MESH:D001102
61 82-91 Disease denotes pneumonia MESH:D011014
62 161-170 Disease denotes pneumonia MESH:D011014
63 282-300 Disease denotes lung abnormalities MESH:D008171
64 480-495 Disease denotes viral pneumonia
65 587-603 Disease denotes bronchopneumonia MESH:D001996
66 616-625 Disease denotes pneumonia MESH:D011014
67 840-849 Disease denotes pneumonia MESH:D011014
68 935-945 Disease denotes pneumonias MESH:D011014
69 962-971 Disease denotes pneumonia MESH:D011014
70 1002-1027 Disease denotes bronchopneumonia patterns MESH:D001996
71 1211-1215 Disease denotes MERS MESH:D018352
72 1277-1286 Disease denotes mortality MESH:D003643
73 1326-1342 Disease denotes pleural effusion MESH:D010996

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T61 28-33 NCBITaxon:10239 denotes viral
T60 210-219 NCBITaxon:1 denotes organisms
T59 282-286 UBERON:0002048 denotes lung
T58 367-377 CHEBI:33282;CHEBI:33282 denotes antibiotic
T57 480-485 NCBITaxon:10239 denotes viral
T56 639-647 UBERON:0003215 denotes alveolar
T55 807-812 UBERON:0001443 denotes chest
T54 981-989 UBERON:0003215 denotes alveolar
T53 1084-1092 UBERON:0003215 denotes alveolar
T52 1184-1193 UBERON:0007221 denotes care unit
T51 1211-1215 SP_9 denotes MERS
T50 1236-1240 UBERON:0002048 denotes lung
T49 1326-1333 UBERON:0000175 denotes pleural

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 282-286 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T9 639-647 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T10 807-812 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T11 981-989 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T12 1084-1092 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T13 1236-1240 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T9 282-286 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T10 807-812 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 1236-1240 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 1326-1342 Body_part denotes pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T12 28-43 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T13 34-43 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T14 82-91 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T15 161-170 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T16 480-495 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T17 486-495 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T18 587-603 Disease denotes bronchopneumonia http://purl.obolibrary.org/obo/MONDO_0005682
T19 605-625 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T21 616-625 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T22 828-837 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T23 840-849 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T24 935-945 Disease denotes pneumonias http://purl.obolibrary.org/obo/MONDO_0005249
T25 951-971 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T27 962-971 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T28 1002-1018 Disease denotes bronchopneumonia http://purl.obolibrary.org/obo/MONDO_0005682

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T21 210-219 http://purl.obolibrary.org/obo/OBI_0100026 denotes organisms
T22 210-219 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organisms
T23 282-286 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T24 282-286 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T25 605-615 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T26 807-812 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T27 838-839 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T28 951-961 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T29 1121-1122 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 1236-1240 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T31 1236-1240 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T32 1326-1342 http://purl.obolibrary.org/obo/UBERON_0000175 denotes pleural effusion
T33 1359-1360 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 367-377 Chemical denotes antibiotic http://purl.obolibrary.org/obo/CHEBI_33281
T4 1287-1292 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T5 1315-1320 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T9 82-91 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T10 161-170 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 486-495 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T12 616-625 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T13 631-654 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T14 840-849 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T15 935-945 Phenotype denotes pneumonias http://purl.obolibrary.org/obo/HP_0002090
T16 962-971 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T17 973-996 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T18 1076-1099 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T19 1326-1342 Phenotype denotes pleural effusion http://purl.obolibrary.org/obo/HP_0002202

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 28-43 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T2 355-377 http://purl.obolibrary.org/obo/GO_0046677 denotes response to antibiotic

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T14 0-92 Sentence denotes The main role of imaging in viral infection lies in the detection or exclusion of pneumonia.
T15 93-301 Sentence denotes Other roles include narrowing down of the differential diagnosis of pneumonia with respect to the involved causative organisms in consideration of the patterns, distribution, and extent of lung abnormalities.
T16 302-350 Sentence denotes Further diagnostic approaches may be clued into.
T17 351-439 Sentence denotes The response to antibiotic therapy may be evaluated using follow-up imaging studies (7).
T18 440-664 Sentence denotes Particularly with the pattern approach, viral pneumonia in an immunocompetent cohort can be further divided into three patterns, namely, bilateral bronchopneumonia, organizing pneumonia, and diffuse alveolar damage patterns.
T19 665-780 Sentence denotes With this approach, patient management (necessitating ventilation support) and prognostication could be determined.
T20 781-903 Sentence denotes Kang et al. (8) evaluated chest CT findings of influenza A pneumonia and correlated the results with the clinical outcome.
T21 904-1198 Sentence denotes They classified CT findings of pneumonias into organizing pneumonia, diffuse alveolar damage, and bronchopneumonia patterns and concluded that patients presenting with the diffuse alveolar damage pattern tend to show a poor prognosis and need ventilation therapy in the intensive care unit (8).
T22 1199-1380 Sentence denotes In cases of MERS, the mean number of lung segments involved was higher in the mortality group than in the recovered group, and pleural effusion correlated with a poor prognosis (9).