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PMC:7039716 / 1151-1935 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
34 15-30 Disease denotes viral pneumonia
35 123-133 Disease denotes pneumonias MESH:D011014
36 340-356 Disease denotes Pleural effusion MESH:D010996
37 360-385 Disease denotes necrotic lung abnormality MESH:D008171
38 419-452 Disease denotes severe acute respiratory syndrome MESH:D045169
39 590-622 Disease denotes middle-east respiratory syndrome MESH:D018352
40 624-628 Disease denotes MERS MESH:D018352
41 640-661 Disease denotes coronavirus infection MESH:D018352

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T81 15-20 NCBITaxon:10239 denotes viral
T80 50-56 UBERON:0007023 denotes adults
T79 152-157 NCBITaxon:10239 denotes viral
T78 158-167 NCBITaxon:1 denotes organisms
T77 238-245 UBERON:0009912 denotes lobular
T76 316-328 UBERON:0001066 denotes interlobular
T75 329-334 UBERON:0003037 denotes septa
T74 340-347 UBERON:0000175 denotes Pleural
T73 348-356 UBERON:0000115 denotes effusion
T72 369-373 UBERON:0002048 denotes lung
T71 432-443 UBERON:0001004 denotes respiratory
T70 464-470 NCBITaxon:11118 denotes corona
T69 471-478 NCBITaxon:10239 denotes viruses
T68 543-547 UBERON:3010752 denotes lobe
T67 563-567 UBERON:0002048 denotes lung
T66 602-613 UBERON:0001004 denotes respiratory
T65 624-628 SP_9 denotes MERS
T64 640-651 NCBITaxon:11118 denotes coronavirus
T63 673-683 UBERON:0003893 denotes subpleural
T62 694-698 UBERON:0002048 denotes lung

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T5 369-373 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T6 563-567 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T7 694-698 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 340-356 Body_part denotes Pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175
T5 369-373 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 543-547 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T7 563-567 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T8 694-698 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T7 15-30 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T8 21-30 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T9 123-133 Disease denotes pneumonias http://purl.obolibrary.org/obo/MONDO_0005249
T10 419-452 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T11 652-661 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 158-167 http://purl.obolibrary.org/obo/OBI_0100026 denotes organisms
T11 158-167 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organisms
T12 236-237 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 340-356 http://purl.obolibrary.org/obo/UBERON_0000175 denotes Pleural effusion
T14 369-373 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T15 369-373 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T16 471-478 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T17 563-567 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T18 563-567 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T19 694-698 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T20 694-698 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 464-470 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 21-30 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T7 123-133 Phenotype denotes pneumonias http://purl.obolibrary.org/obo/HP_0002090
T8 340-356 Phenotype denotes Pleural effusion http://purl.obolibrary.org/obo/HP_0002202

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T9 0-78 Sentence denotes CT findings of viral pneumonia in immunocompetent adults have been well known.
T10 79-339 Sentence denotes Although the findings overlap among various pneumonias caused by diverse viral organisms, CT features include poorly defined centrilobular nodules, GGO with a lobular distribution, segmental consolidation, and diffuse GGO with thickened interlobular septa (3).
T11 340-401 Sentence denotes Pleural effusion or necrotic lung abnormality is rarely seen.
T12 402-586 Sentence denotes Particularly, in severe acute respiratory syndrome, for which corona viruses are also being implicated, common CT features are GGO and lower lobe and peripheral lung distributions (4).
T13 587-784 Sentence denotes In middle-east respiratory syndrome (MERS) caused by coronavirus infection, bilateral subpleural and lower lung zone-predominant GGO and consolidation were the most commonly observed findings (56).