PMC:7039714 / 5541-6427
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 181 | 679-687 | Disease | denotes | fibrosis | MESH:D005355 |
| 168 | 5-13 | Species | denotes | patients | Tax:9606 |
| 169 | 250-257 | Species | denotes | patient | Tax:9606 |
| 170 | 341-349 | Species | denotes | patients | Tax:9606 |
| 171 | 798-806 | Species | denotes | patients | Tax:9606 |
| 172 | 265-281 | Disease | denotes | pleural effusion | MESH:D010996 |
| 173 | 285-300 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 174 | 309-313 | Disease | denotes | SARS | MESH:D045169 |
| 175 | 332-340 | Disease | denotes | infected | MESH:D007239 |
| 176 | 381-393 | Disease | denotes | lung lesions | MESH:D008171 |
| 177 | 494-515 | Disease | denotes | mediastinal emphysema | MESH:D008478 |
| 178 | 543-555 | Disease | denotes | lung lesions | MESH:D008171 |
| 179 | 607-623 | Disease | denotes | bronchopneumonia | MESH:D001996 |
| 180 | 638-653 | Disease | denotes | viral infection | MESH:D001102 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T28 | 109-114 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T29 | 381-385 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T30 | 405-410 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T31 | 483-488 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T32 | 543-547 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T13 | 265-281 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T14 | 381-385 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T15 | 543-547 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T16 | 872-877 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T30 | 285-300 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T31 | 309-313 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T32 | 506-515 | Disease | denotes | emphysema | http://purl.obolibrary.org/obo/MONDO_0004849 |
| T33 | 607-623 | Disease | denotes | bronchopneumonia | http://purl.obolibrary.org/obo/MONDO_0005682 |
| T34 | 638-653 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T35 | 644-653 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T49 | 109-114 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T50 | 265-281 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T51 | 381-385 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T52 | 381-385 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T53 | 405-410 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T54 | 447-448 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T55 | 483-488 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T56 | 543-547 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T57 | 543-547 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 638-653 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T49 | 0-241 | Sentence | denotes | Both patients reported here showed multiple areas of patchy consolidation and ground-glass opacities in both lungs, with most of the lesions distributed along the bronchial bundles or in the subpleural areas, particularly in the lower lobes. |
| T50 | 242-301 | Sentence | denotes | Neither patient showed pleural effusion or lymphadenopathy. |
| T51 | 302-523 | Sentence | denotes | In the SARS outbreak in 2003, infected patients exhibited rapid progression of lung lesions, with both lungs showing diffuse infiltration within a short period and producing “white lungs” and mediastinal emphysema (1112). |
| T52 | 524-654 | Sentence | denotes | In contrast, these lung lesions are relatively mild and are easily misdiagnosed as bronchopneumonia or any common viral infection. |
| T53 | 655-886 | Sentence | denotes | In addition, no obvious fibrosis was found in these cases, which may be related to the short course and mild intensity of the disease in these patients; this speculation remains to be confirmed using subsequent large-scale studies. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T26 | 265-281 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T27 | 285-300 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T28 | 506-515 | Phenotype | denotes | emphysema | http://purl.obolibrary.org/obo/HP_0002097 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32056397-14990845-66065287 | 517-519 | 14990845 | denotes | 11 |
| 32056397-14684509-66065288 | 517-521 | 14684509 | denotes | 1112 |