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PMC:7036342 / 8219-8942 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
168 22-32 Species denotes SARS-CoV-2 Tax:2697049
169 88-98 Species denotes SARS-CoV-2 Tax:2697049
170 407-417 Species denotes SARS-CoV-2 Tax:2697049
171 393-401 Disease denotes infected MESH:D007239
174 670-708 Species denotes severe acute respiratory syndrome, CoV Tax:694009
175 711-722 Species denotes coronavirus Tax:11118

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T47 41-45 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T48 105-110 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T49 168-172 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T50 267-272 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T51 281-285 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T52 387-392 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T53 431-435 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T54 444-460 Body_part denotes nuclear membrane http://purl.org/sig/ont/fma/fma63888
T55 474-478 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T56 531-550 Body_part denotes cytoplasmic vesicle http://purl.org/sig/ont/fma/fma63175

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 431-435 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T4 474-478 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T50 22-30 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 22-26 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T52 88-96 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T53 88-92 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T54 407-415 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T55 407-411 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T56 663-667 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T57 670-703 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T75 36-45 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero cell
T76 100-104 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero
T77 100-104 http://purl.obolibrary.org/obo/CLO_0050515 denotes Vero
T78 105-110 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T79 160-161 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 163-172 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero cell
T81 204-205 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T82 267-272 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T83 276-285 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero cell
T84 382-386 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero
T85 382-386 http://purl.obolibrary.org/obo/CLO_0050515 denotes Vero
T86 387-392 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T87 431-435 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T88 431-435 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T89 452-460 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T90 474-478 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T91 474-478 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T92 493-498 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T93 561-566 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T94 619-624 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T47 59-67 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T48 353-361 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T49 640-645 Chemical denotes crown http://purl.obolibrary.org/obo/CHEBI_37409

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T61 100-418 Sentence denotes Vero cells were inoculated with oropharyngeal swab sample. (A) Vero cell cultures in negative control. (B) Cytopathic effects consisting of rounding and detachment of cells in Vero cell cultures 3 days after the first blind passage. (C, D) Transmission electron microscopy image of Vero cells infected with SARS-CoV-2.
T62 419-582 Sentence denotes White arrow head denotes nuclear membrane, black arrow head extracellular virus particles, and thin black arrow cytoplasmic vesicle including virus components (C).
T63 583-662 Sentence denotes Thick black arrow denotes magnified virus particles with crown-like spikes (D).
T64 663-723 Sentence denotes SARS = severe acute respiratory syndrome, CoV = coronavirus.