PMC:7033720 / 4752-5091 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"76","span":{"begin":187,"end":191},"obj":"Gene"},{"id":"77","span":{"begin":319,"end":324},"obj":"Species"}],"attributes":[{"id":"A76","pred":"tao:has_database_id","subj":"76","obj":"Gene:7204"},{"id":"A77","pred":"tao:has_database_id","subj":"77","obj":"Tax:9606"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The concentration of RNA samples were low (\u003c0.5 ng/ul) based on measurement by Qubit RNA HS Assay Kit (Thermo Fisher Scientific), and therefore the library preparation was performed with Trio RNA-Seq kit (NuGEN Technologies, USA) which targeted low concentration RNA samples and contained AnyDeplete probe that removes human ribosomal RNA."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T28","span":{"begin":21,"end":24},"obj":"Body_part"},{"id":"T29","span":{"begin":85,"end":88},"obj":"Body_part"},{"id":"T30","span":{"begin":192,"end":195},"obj":"Body_part"},{"id":"T31","span":{"begin":263,"end":266},"obj":"Body_part"},{"id":"T32","span":{"begin":325,"end":338},"obj":"Body_part"},{"id":"T33","span":{"begin":335,"end":338},"obj":"Body_part"}],"attributes":[{"id":"A28","pred":"fma_id","subj":"T28","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A29","pred":"fma_id","subj":"T29","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A30","pred":"fma_id","subj":"T30","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A31","pred":"fma_id","subj":"T31","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A32","pred":"fma_id","subj":"T32","obj":"http://purl.org/sig/ont/fma/fma67118"},{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":"The concentration of RNA samples were low (\u003c0.5 ng/ul) based on measurement by Qubit RNA HS Assay Kit (Thermo Fisher Scientific), and therefore the library preparation was performed with Trio RNA-Seq kit (NuGEN Technologies, USA) which targeted low concentration RNA samples and contained AnyDeplete probe that removes human ribosomal RNA."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T37","span":{"begin":319,"end":324},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"}],"text":"The concentration of RNA samples were low (\u003c0.5 ng/ul) based on measurement by Qubit RNA HS Assay Kit (Thermo Fisher Scientific), and therefore the library preparation was performed with Trio RNA-Seq kit (NuGEN Technologies, USA) which targeted low concentration RNA samples and contained AnyDeplete probe that removes human ribosomal RNA."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T6","span":{"begin":89,"end":91},"obj":"Chemical"},{"id":"T7","span":{"begin":300,"end":305},"obj":"Chemical"},{"id":"T8","span":{"begin":325,"end":338},"obj":"Chemical"}],"attributes":[{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_74056"},{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_50406"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_18111"}],"text":"The concentration of RNA samples were low (\u003c0.5 ng/ul) based on measurement by Qubit RNA HS Assay Kit (Thermo Fisher Scientific), and therefore the library preparation was performed with Trio RNA-Seq kit (NuGEN Technologies, USA) which targeted low concentration RNA samples and contained AnyDeplete probe that removes human ribosomal RNA."}

{"project":"LitCovid-sentences","denotations":[{"id":"T47","span":{"begin":0,"end":339},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The concentration of RNA samples were low (\u003c0.5 ng/ul) based on measurement by Qubit RNA HS Assay Kit (Thermo Fisher Scientific), and therefore the library preparation was performed with Trio RNA-Seq kit (NuGEN Technologies, USA) which targeted low concentration RNA samples and contained AnyDeplete probe that removes human ribosomal RNA."}