> top > docs > PMC:7033720 > spans > 17580-18444 > annotations

PMC:7033720 / 17580-18444 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
287 173-178 Gene denotes ORF1b Gene:43740578
288 62-66 Species denotes CoVs Tax:11118
289 87-96 Species denotes 2019-nCoV Tax:2697049
290 129-133 Species denotes CoVs Tax:11118
291 237-242 Species denotes human Tax:9606
292 344-348 Species denotes CoVs Tax:11118
293 466-474 Species denotes SARS-CoV Tax:694009
294 650-654 Species denotes CoVs Tax:11118
295 828-837 Species denotes SARS CoVs Tax:694009

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T79 179-186 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T80 366-372 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T81 520-526 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T82 696-706 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T83 784-788 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T84 843-847 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 466-474 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T32 640-644 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T33 828-832 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T179 68-69 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T180 237-242 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T181 254-261 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T182 363-364 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T183 403-410 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T184 447-450 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T185 478-479 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T186 617-624 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T187 724-729 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T188 784-788 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T189 843-847 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T49 179-186 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T50 328-333 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T51 339-343 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T52 451-453 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T53 696-706 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T168 0-9 Sentence denotes Figure 3.
T169 10-67 Sentence denotes Origin and evolutionary history of newly identified CoVs.
T170 68-134 Sentence denotes A. the position of 2019-nCoV in the context of all reference CoVs.
T171 135-197 Sentence denotes The phylogeny is constructed based on ORF1b protein alignment.
T172 198-262 Sentence denotes For clarity, names were only shown for human-associated viruses.
T173 263-362 Sentence denotes Bat associated diversity is shaded with blue and green boxes for alpha- and beta-CoVs respectively.
T174 363-527 Sentence denotes B. genome structure of newly identified viruses and its sequence similarity against bat-SL-CoVZC45 and SARS-CoV in a 1000bp sliding window across the entire genome.
T175 528-589 Sentence denotes Recombination breakpoints are shown as dashed vertical lines.
T176 590-655 Sentence denotes C. the relationship of WHU viruses with the other SARS-like CoVs.
T177 656-755 Sentence denotes Phylogeny is reconstructed based on the nucleotide sequence of four genes: namely 1a, 1b, S, and N.
T178 756-864 Sentence denotes Those grouped with WHU at S gene are marked red, and those grouped with SARS CoVs at S gene are marked blue.