PMC:7033698 / 10045-10961 JSONTXT

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T7","span":{"begin":516,"end":520},"obj":"Disease"},{"id":"T8","span":{"begin":883,"end":892},"obj":"Disease"}],"attributes":[{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"Identification of the origins of these inserted sequences in three bat CoV viruses and the new epidemic 2019-nCoV strain will be important for us to understand how CoV viruses jump from animals to humans and adapt in the latter. Current data showed that RaTG13 is most closely related to 2019-nCoV [7]. However, the genetic difference between them is too high for RaTG13 to serve as the immediate ancestor of 2019-nCoV. Other viruses that are more closely related to 2019-nCoV in intermediate animals like civet for SARS and camel for MERS [3,12] are remained to be identified. More studies are necessary to identify the real source of 2019-nCoV. This may take a long time to identify the origin of 2019-nCoV by screening a large number of wild and domestic animals. In any case, reducing or eliminating direct contacts with wild animals will be critical to control the new epidemic infection diseases in the future."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T107","span":{"begin":67,"end":70},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T108","span":{"begin":75,"end":82},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T109","span":{"begin":168,"end":175},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T110","span":{"begin":186,"end":193},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T111","span":{"begin":197,"end":203},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T112","span":{"begin":426,"end":433},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T113","span":{"begin":493,"end":500},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T114","span":{"begin":525,"end":530},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9837"},{"id":"T115","span":{"begin":661,"end":662},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T116","span":{"begin":722,"end":723},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T117","span":{"begin":758,"end":765},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"},{"id":"T118","span":{"begin":830,"end":837},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"}],"text":"Identification of the origins of these inserted sequences in three bat CoV viruses and the new epidemic 2019-nCoV strain will be important for us to understand how CoV viruses jump from animals to humans and adapt in the latter. Current data showed that RaTG13 is most closely related to 2019-nCoV [7]. However, the genetic difference between them is too high for RaTG13 to serve as the immediate ancestor of 2019-nCoV. Other viruses that are more closely related to 2019-nCoV in intermediate animals like civet for SARS and camel for MERS [3,12] are remained to be identified. More studies are necessary to identify the real source of 2019-nCoV. This may take a long time to identify the origin of 2019-nCoV by screening a large number of wild and domestic animals. In any case, reducing or eliminating direct contacts with wild animals will be critical to control the new epidemic infection diseases in the future."}

{"project":"LitCovid-sentences","denotations":[{"id":"T82","span":{"begin":0,"end":228},"obj":"Sentence"},{"id":"T83","span":{"begin":229,"end":302},"obj":"Sentence"},{"id":"T84","span":{"begin":303,"end":419},"obj":"Sentence"},{"id":"T85","span":{"begin":420,"end":577},"obj":"Sentence"},{"id":"T86","span":{"begin":578,"end":646},"obj":"Sentence"},{"id":"T87","span":{"begin":647,"end":766},"obj":"Sentence"},{"id":"T88","span":{"begin":767,"end":916},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Identification of the origins of these inserted sequences in three bat CoV viruses and the new epidemic 2019-nCoV strain will be important for us to understand how CoV viruses jump from animals to humans and adapt in the latter. Current data showed that RaTG13 is most closely related to 2019-nCoV [7]. However, the genetic difference between them is too high for RaTG13 to serve as the immediate ancestor of 2019-nCoV. Other viruses that are more closely related to 2019-nCoV in intermediate animals like civet for SARS and camel for MERS [3,12] are remained to be identified. More studies are necessary to identify the real source of 2019-nCoV. This may take a long time to identify the origin of 2019-nCoV by screening a large number of wild and domestic animals. In any case, reducing or eliminating direct contacts with wild animals will be critical to control the new epidemic infection diseases in the future."}

{"project":"LitCovid-PubTator","denotations":[{"id":"287","span":{"begin":71,"end":74},"obj":"Species"},{"id":"288","span":{"begin":104,"end":113},"obj":"Species"},{"id":"289","span":{"begin":164,"end":167},"obj":"Species"},{"id":"290","span":{"begin":197,"end":203},"obj":"Species"},{"id":"291","span":{"begin":288,"end":297},"obj":"Species"},{"id":"292","span":{"begin":409,"end":418},"obj":"Species"},{"id":"293","span":{"begin":467,"end":476},"obj":"Species"},{"id":"294","span":{"begin":525,"end":530},"obj":"Species"},{"id":"295","span":{"begin":636,"end":645},"obj":"Species"},{"id":"296","span":{"begin":699,"end":708},"obj":"Species"},{"id":"297","span":{"begin":516,"end":520},"obj":"Disease"},{"id":"298","span":{"begin":535,"end":539},"obj":"Disease"},{"id":"299","span":{"begin":883,"end":901},"obj":"Disease"}],"attributes":[{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"Tax:11118"},{"id":"A288","pred":"tao:has_database_id","subj":"288","obj":"Tax:2697049"},{"id":"A289","pred":"tao:has_database_id","subj":"289","obj":"Tax:11118"},{"id":"A290","pred":"tao:has_database_id","subj":"290","obj":"Tax:9606"},{"id":"A291","pred":"tao:has_database_id","subj":"291","obj":"Tax:2697049"},{"id":"A292","pred":"tao:has_database_id","subj":"292","obj":"Tax:2697049"},{"id":"A293","pred":"tao:has_database_id","subj":"293","obj":"Tax:2697049"},{"id":"A294","pred":"tao:has_database_id","subj":"294","obj":"Tax:9837"},{"id":"A295","pred":"tao:has_database_id","subj":"295","obj":"Tax:2697049"},{"id":"A296","pred":"tao:has_database_id","subj":"296","obj":"Tax:2697049"},{"id":"A297","pred":"tao:has_database_id","subj":"297","obj":"MESH:D045169"},{"id":"A298","pred":"tao:has_database_id","subj":"298","obj":"MESH:D018352"},{"id":"A299","pred":"tao:has_database_id","subj":"299","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Identification of the origins of these inserted sequences in three bat CoV viruses and the new epidemic 2019-nCoV strain will be important for us to understand how CoV viruses jump from animals to humans and adapt in the latter. Current data showed that RaTG13 is most closely related to 2019-nCoV [7]. However, the genetic difference between them is too high for RaTG13 to serve as the immediate ancestor of 2019-nCoV. Other viruses that are more closely related to 2019-nCoV in intermediate animals like civet for SARS and camel for MERS [3,12] are remained to be identified. More studies are necessary to identify the real source of 2019-nCoV. This may take a long time to identify the origin of 2019-nCoV by screening a large number of wild and domestic animals. In any case, reducing or eliminating direct contacts with wild animals will be critical to control the new epidemic infection diseases in the future."}