PMC:7033275 / 4153-6297 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T22","span":{"begin":34,"end":44},"obj":"Body_part"}],"attributes":[{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma82740"}],"text":"Primer Sequence (5′–3′) Target (nucleotide position) or amplification method Size (bp)\n1F CCTGGCCTCTTGCTTTTTCACATGT 20504 1,686\n1R ACTTCGACGGTTGAGAAACAAATAG 22189 1,686\n2F CGCGTTAAGAGTGGTTCACCAGGTG 22059 1,623\n2R CAAAGCTGCAAGCCGTCCAGTAATT 23681 1,623\n3F TTCAATTCAAGCCGATCAACAAGTT 23624 1,600\n3R GTCATCAATTAATCGAAGGAACATC 25223 1,600\n4F CGAAGAGCCTGTTGTTGGTATAGTC 25153 1,690\n4R AACACGCTTCCAACGAGGTTTCTTC 26849 1,690\n5F CCAGGGCTGATAAGCCTTCTCAGTT 26800 754\n5R GTGTATCCATATCAAAAACAATATC 27553 754\n6F TGAGGATGTTTGTGTTTGTTTTGAC 18864 1,710\n6R GTCAGGAACACCTAATTGTAACATA 20573 1,710\n7F TGCGTGGTTGGTTGGGTATGGATGT 17234 1,682\n7R ACGCTCATACGAACCCTGAATACTA 18915 1,682\n8F ATTCAGCAACTGGTTCCTTAGATGT 15479 1,808\n8R GTTATCGCCACAAACATGAGCACTT 17286 1,808\n9F CTCCCTACTATGACACAGCTGAATC 14005 1,596\n9R AGCCGCAAAGAGTCTAAGTGTATCT 15600 1,596\n10F GACCGTACAACTATTCAAAGTGTTG 12398 1,659\n10R GTTCTTTACCACTAATAGCATACTT 14056 1,659\n11F GGGCTATGGCTAATGGTTATACAAG 9801 1,435\n11R TTTGCGATATTCATGGCACGCTTCA 11235 1,435\n12F ACCCTTCAGAGTGTTGCTTCATCAT 11090 1,378\n12R AGTCGAGCTGCACTAGAACCCCTTG 12467 1,378\n13F CAACCACTGTAACTAGCTTTCATGG 7758 2,103\n13R CTGCCAAAATAGAATAGCACTCAAC 9860 2,103\n14F GTCAAAAGGGTGATGCTGAAGAGGC 5424 2,394\n14R TCAACTGACCATTCTCAATGTACTT 7817 2,394\n15F TAGAGATGAATTGGGTGTTCGTGTT 3424 2,043\n15R GGTCCAACATCACCTGTAACAAATT 5466 2,043\n16F GCAGATGTTCCAGATGCTTTTCAAT 1637 1,864\n16R GCAACTGTACAAGTGTGGTACTAAT 3500 1,864\n17F CAGCAATTATGTTCTTCAGGACTTT 565 1,118\n17R GTGTAAATGTGCGATAAACTGATTG 1682 1,118\n18F CTTAAAGAATTTTTCTATCTATAGA 1 1,056\n18R CATGCACCAACACTCCAACTCTCAG 1056 1,056\nGSP 1 CGAAGAGCCTGTTGTTGGTATAGTC 3′ RACEa Unknown\nAP GGCCACGCGTCGACTAGTACTTTTTTTTTTTTTTTTT 3′ RACE Unknown\nGSP 2 CCAGGGCTGATAAGCCTTCTCAGTT Nested PCR Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nAAP GGCCACGCGTCGACTAGTACGGGGGGGGGG 5′ RACE Unknown\nGSP 1 GTGTAAATGTGCGATAAACTGATTG 5′ RACE Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nGSP 2 CATGCACCAACACTCCAACTCTCAG Nested PCR Unknown\nGSP3 CCATGGCCAAAAACAACATCAAAGT Nested PCR Unknown"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T30","span":{"begin":1723,"end":1725},"obj":"http://purl.obolibrary.org/obo/CLO_0001547"}],"text":"Primer Sequence (5′–3′) Target (nucleotide position) or amplification method Size (bp)\n1F CCTGGCCTCTTGCTTTTTCACATGT 20504 1,686\n1R ACTTCGACGGTTGAGAAACAAATAG 22189 1,686\n2F CGCGTTAAGAGTGGTTCACCAGGTG 22059 1,623\n2R CAAAGCTGCAAGCCGTCCAGTAATT 23681 1,623\n3F TTCAATTCAAGCCGATCAACAAGTT 23624 1,600\n3R GTCATCAATTAATCGAAGGAACATC 25223 1,600\n4F CGAAGAGCCTGTTGTTGGTATAGTC 25153 1,690\n4R AACACGCTTCCAACGAGGTTTCTTC 26849 1,690\n5F CCAGGGCTGATAAGCCTTCTCAGTT 26800 754\n5R GTGTATCCATATCAAAAACAATATC 27553 754\n6F TGAGGATGTTTGTGTTTGTTTTGAC 18864 1,710\n6R GTCAGGAACACCTAATTGTAACATA 20573 1,710\n7F TGCGTGGTTGGTTGGGTATGGATGT 17234 1,682\n7R ACGCTCATACGAACCCTGAATACTA 18915 1,682\n8F ATTCAGCAACTGGTTCCTTAGATGT 15479 1,808\n8R GTTATCGCCACAAACATGAGCACTT 17286 1,808\n9F CTCCCTACTATGACACAGCTGAATC 14005 1,596\n9R AGCCGCAAAGAGTCTAAGTGTATCT 15600 1,596\n10F GACCGTACAACTATTCAAAGTGTTG 12398 1,659\n10R GTTCTTTACCACTAATAGCATACTT 14056 1,659\n11F GGGCTATGGCTAATGGTTATACAAG 9801 1,435\n11R TTTGCGATATTCATGGCACGCTTCA 11235 1,435\n12F ACCCTTCAGAGTGTTGCTTCATCAT 11090 1,378\n12R AGTCGAGCTGCACTAGAACCCCTTG 12467 1,378\n13F CAACCACTGTAACTAGCTTTCATGG 7758 2,103\n13R CTGCCAAAATAGAATAGCACTCAAC 9860 2,103\n14F GTCAAAAGGGTGATGCTGAAGAGGC 5424 2,394\n14R TCAACTGACCATTCTCAATGTACTT 7817 2,394\n15F TAGAGATGAATTGGGTGTTCGTGTT 3424 2,043\n15R GGTCCAACATCACCTGTAACAAATT 5466 2,043\n16F GCAGATGTTCCAGATGCTTTTCAAT 1637 1,864\n16R GCAACTGTACAAGTGTGGTACTAAT 3500 1,864\n17F CAGCAATTATGTTCTTCAGGACTTT 565 1,118\n17R GTGTAAATGTGCGATAAACTGATTG 1682 1,118\n18F CTTAAAGAATTTTTCTATCTATAGA 1 1,056\n18R CATGCACCAACACTCCAACTCTCAG 1056 1,056\nGSP 1 CGAAGAGCCTGTTGTTGGTATAGTC 3′ RACEa Unknown\nAP GGCCACGCGTCGACTAGTACTTTTTTTTTTTTTTTTT 3′ RACE Unknown\nGSP 2 CCAGGGCTGATAAGCCTTCTCAGTT Nested PCR Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nAAP GGCCACGCGTCGACTAGTACGGGGGGGGGG 5′ RACE Unknown\nGSP 1 GTGTAAATGTGCGATAAACTGATTG 5′ RACE Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nGSP 2 CATGCACCAACACTCCAACTCTCAG Nested PCR Unknown\nGSP3 CCATGGCCAAAAACAACATCAAAGT Nested PCR Unknown"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T7","span":{"begin":34,"end":44},"obj":"Chemical"},{"id":"T8","span":{"begin":790,"end":792},"obj":"Chemical"},{"id":"T9","span":{"begin":1723,"end":1725},"obj":"Chemical"},{"id":"T12","span":{"begin":1885,"end":1888},"obj":"Chemical"}],"attributes":[{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_24061"},{"id":"A9","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_28971"},{"id":"A10","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_73393"},{"id":"A11","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_81686"},{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_73323"}],"text":"Primer Sequence (5′–3′) Target (nucleotide position) or amplification method Size (bp)\n1F CCTGGCCTCTTGCTTTTTCACATGT 20504 1,686\n1R ACTTCGACGGTTGAGAAACAAATAG 22189 1,686\n2F CGCGTTAAGAGTGGTTCACCAGGTG 22059 1,623\n2R CAAAGCTGCAAGCCGTCCAGTAATT 23681 1,623\n3F TTCAATTCAAGCCGATCAACAAGTT 23624 1,600\n3R GTCATCAATTAATCGAAGGAACATC 25223 1,600\n4F CGAAGAGCCTGTTGTTGGTATAGTC 25153 1,690\n4R AACACGCTTCCAACGAGGTTTCTTC 26849 1,690\n5F CCAGGGCTGATAAGCCTTCTCAGTT 26800 754\n5R GTGTATCCATATCAAAAACAATATC 27553 754\n6F TGAGGATGTTTGTGTTTGTTTTGAC 18864 1,710\n6R GTCAGGAACACCTAATTGTAACATA 20573 1,710\n7F TGCGTGGTTGGTTGGGTATGGATGT 17234 1,682\n7R ACGCTCATACGAACCCTGAATACTA 18915 1,682\n8F ATTCAGCAACTGGTTCCTTAGATGT 15479 1,808\n8R GTTATCGCCACAAACATGAGCACTT 17286 1,808\n9F CTCCCTACTATGACACAGCTGAATC 14005 1,596\n9R AGCCGCAAAGAGTCTAAGTGTATCT 15600 1,596\n10F GACCGTACAACTATTCAAAGTGTTG 12398 1,659\n10R GTTCTTTACCACTAATAGCATACTT 14056 1,659\n11F GGGCTATGGCTAATGGTTATACAAG 9801 1,435\n11R TTTGCGATATTCATGGCACGCTTCA 11235 1,435\n12F ACCCTTCAGAGTGTTGCTTCATCAT 11090 1,378\n12R AGTCGAGCTGCACTAGAACCCCTTG 12467 1,378\n13F CAACCACTGTAACTAGCTTTCATGG 7758 2,103\n13R CTGCCAAAATAGAATAGCACTCAAC 9860 2,103\n14F GTCAAAAGGGTGATGCTGAAGAGGC 5424 2,394\n14R TCAACTGACCATTCTCAATGTACTT 7817 2,394\n15F TAGAGATGAATTGGGTGTTCGTGTT 3424 2,043\n15R GGTCCAACATCACCTGTAACAAATT 5466 2,043\n16F GCAGATGTTCCAGATGCTTTTCAAT 1637 1,864\n16R GCAACTGTACAAGTGTGGTACTAAT 3500 1,864\n17F CAGCAATTATGTTCTTCAGGACTTT 565 1,118\n17R GTGTAAATGTGCGATAAACTGATTG 1682 1,118\n18F CTTAAAGAATTTTTCTATCTATAGA 1 1,056\n18R CATGCACCAACACTCCAACTCTCAG 1056 1,056\nGSP 1 CGAAGAGCCTGTTGTTGGTATAGTC 3′ RACEa Unknown\nAP GGCCACGCGTCGACTAGTACTTTTTTTTTTTTTTTTT 3′ RACE Unknown\nGSP 2 CCAGGGCTGATAAGCCTTCTCAGTT Nested PCR Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nAAP GGCCACGCGTCGACTAGTACGGGGGGGGGG 5′ RACE Unknown\nGSP 1 GTGTAAATGTGCGATAAACTGATTG 5′ RACE Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nGSP 2 CATGCACCAACACTCCAACTCTCAG Nested PCR Unknown\nGSP3 CCATGGCCAAAAACAACATCAAAGT Nested PCR Unknown"}

{"project":"LitCovid-sentences","denotations":[{"id":"T32","span":{"begin":0,"end":89},"obj":"Sentence"},{"id":"T33","span":{"begin":90,"end":133},"obj":"Sentence"},{"id":"T34","span":{"begin":134,"end":177},"obj":"Sentence"},{"id":"T35","span":{"begin":178,"end":221},"obj":"Sentence"},{"id":"T36","span":{"begin":222,"end":265},"obj":"Sentence"},{"id":"T37","span":{"begin":266,"end":309},"obj":"Sentence"},{"id":"T38","span":{"begin":310,"end":353},"obj":"Sentence"},{"id":"T39","span":{"begin":354,"end":397},"obj":"Sentence"},{"id":"T40","span":{"begin":398,"end":441},"obj":"Sentence"},{"id":"T41","span":{"begin":442,"end":483},"obj":"Sentence"},{"id":"T42","span":{"begin":484,"end":525},"obj":"Sentence"},{"id":"T43","span":{"begin":526,"end":569},"obj":"Sentence"},{"id":"T44","span":{"begin":570,"end":613},"obj":"Sentence"},{"id":"T45","span":{"begin":614,"end":657},"obj":"Sentence"},{"id":"T46","span":{"begin":658,"end":701},"obj":"Sentence"},{"id":"T47","span":{"begin":702,"end":745},"obj":"Sentence"},{"id":"T48","span":{"begin":746,"end":789},"obj":"Sentence"},{"id":"T49","span":{"begin":790,"end":833},"obj":"Sentence"},{"id":"T50","span":{"begin":834,"end":877},"obj":"Sentence"},{"id":"T51","span":{"begin":878,"end":922},"obj":"Sentence"},{"id":"T52","span":{"begin":923,"end":967},"obj":"Sentence"},{"id":"T53","span":{"begin":968,"end":1011},"obj":"Sentence"},{"id":"T54","span":{"begin":1012,"end":1056},"obj":"Sentence"},{"id":"T55","span":{"begin":1057,"end":1101},"obj":"Sentence"},{"id":"T56","span":{"begin":1102,"end":1146},"obj":"Sentence"},{"id":"T57","span":{"begin":1147,"end":1190},"obj":"Sentence"},{"id":"T58","span":{"begin":1191,"end":1234},"obj":"Sentence"},{"id":"T59","span":{"begin":1235,"end":1278},"obj":"Sentence"},{"id":"T60","span":{"begin":1279,"end":1322},"obj":"Sentence"},{"id":"T61","span":{"begin":1323,"end":1366},"obj":"Sentence"},{"id":"T62","span":{"begin":1367,"end":1410},"obj":"Sentence"},{"id":"T63","span":{"begin":1411,"end":1454},"obj":"Sentence"},{"id":"T64","span":{"begin":1455,"end":1498},"obj":"Sentence"},{"id":"T65","span":{"begin":1499,"end":1541},"obj":"Sentence"},{"id":"T66","span":{"begin":1542,"end":1585},"obj":"Sentence"},{"id":"T67","span":{"begin":1586,"end":1626},"obj":"Sentence"},{"id":"T68","span":{"begin":1627,"end":1670},"obj":"Sentence"},{"id":"T69","span":{"begin":1671,"end":1722},"obj":"Sentence"},{"id":"T70","span":{"begin":1723,"end":1782},"obj":"Sentence"},{"id":"T71","span":{"begin":1783,"end":1836},"obj":"Sentence"},{"id":"T72","span":{"begin":1837,"end":1884},"obj":"Sentence"},{"id":"T73","span":{"begin":1885,"end":1938},"obj":"Sentence"},{"id":"T74","span":{"begin":1939,"end":1989},"obj":"Sentence"},{"id":"T75","span":{"begin":1990,"end":2037},"obj":"Sentence"},{"id":"T76","span":{"begin":2038,"end":2091},"obj":"Sentence"},{"id":"T77","span":{"begin":2092,"end":2144},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Primer Sequence (5′–3′) Target (nucleotide position) or amplification method Size (bp)\n1F CCTGGCCTCTTGCTTTTTCACATGT 20504 1,686\n1R ACTTCGACGGTTGAGAAACAAATAG 22189 1,686\n2F CGCGTTAAGAGTGGTTCACCAGGTG 22059 1,623\n2R CAAAGCTGCAAGCCGTCCAGTAATT 23681 1,623\n3F TTCAATTCAAGCCGATCAACAAGTT 23624 1,600\n3R GTCATCAATTAATCGAAGGAACATC 25223 1,600\n4F CGAAGAGCCTGTTGTTGGTATAGTC 25153 1,690\n4R AACACGCTTCCAACGAGGTTTCTTC 26849 1,690\n5F CCAGGGCTGATAAGCCTTCTCAGTT 26800 754\n5R GTGTATCCATATCAAAAACAATATC 27553 754\n6F TGAGGATGTTTGTGTTTGTTTTGAC 18864 1,710\n6R GTCAGGAACACCTAATTGTAACATA 20573 1,710\n7F TGCGTGGTTGGTTGGGTATGGATGT 17234 1,682\n7R ACGCTCATACGAACCCTGAATACTA 18915 1,682\n8F ATTCAGCAACTGGTTCCTTAGATGT 15479 1,808\n8R GTTATCGCCACAAACATGAGCACTT 17286 1,808\n9F CTCCCTACTATGACACAGCTGAATC 14005 1,596\n9R AGCCGCAAAGAGTCTAAGTGTATCT 15600 1,596\n10F GACCGTACAACTATTCAAAGTGTTG 12398 1,659\n10R GTTCTTTACCACTAATAGCATACTT 14056 1,659\n11F GGGCTATGGCTAATGGTTATACAAG 9801 1,435\n11R TTTGCGATATTCATGGCACGCTTCA 11235 1,435\n12F ACCCTTCAGAGTGTTGCTTCATCAT 11090 1,378\n12R AGTCGAGCTGCACTAGAACCCCTTG 12467 1,378\n13F CAACCACTGTAACTAGCTTTCATGG 7758 2,103\n13R CTGCCAAAATAGAATAGCACTCAAC 9860 2,103\n14F GTCAAAAGGGTGATGCTGAAGAGGC 5424 2,394\n14R TCAACTGACCATTCTCAATGTACTT 7817 2,394\n15F TAGAGATGAATTGGGTGTTCGTGTT 3424 2,043\n15R GGTCCAACATCACCTGTAACAAATT 5466 2,043\n16F GCAGATGTTCCAGATGCTTTTCAAT 1637 1,864\n16R GCAACTGTACAAGTGTGGTACTAAT 3500 1,864\n17F CAGCAATTATGTTCTTCAGGACTTT 565 1,118\n17R GTGTAAATGTGCGATAAACTGATTG 1682 1,118\n18F CTTAAAGAATTTTTCTATCTATAGA 1 1,056\n18R CATGCACCAACACTCCAACTCTCAG 1056 1,056\nGSP 1 CGAAGAGCCTGTTGTTGGTATAGTC 3′ RACEa Unknown\nAP GGCCACGCGTCGACTAGTACTTTTTTTTTTTTTTTTT 3′ RACE Unknown\nGSP 2 CCAGGGCTGATAAGCCTTCTCAGTT Nested PCR Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nAAP GGCCACGCGTCGACTAGTACGGGGGGGGGG 5′ RACE Unknown\nGSP 1 GTGTAAATGTGCGATAAACTGATTG 5′ RACE Unknown\nAUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown\nGSP 2 CATGCACCAACACTCCAACTCTCAG Nested PCR Unknown\nGSP3 CCATGGCCAAAAACAACATCAAAGT Nested PCR Unknown"}