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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 9-15 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T2 199-205 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T3 485-492 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T4 612-618 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T5 898-905 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T6 1256-1262 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T7 1308-1312 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T8 1456-1468 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T9 1556-1560 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T10 1639-1644 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T11 1695-1718 Body_part denotes upper respiratory tract http://purl.org/sig/ont/fma/fma45661
T12 2129-2132 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T13 2179-2182 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T14 2213-2216 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T15 2589-2592 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T16 2753-2756 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T17 3226-3232 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T18 3422-3428 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T19 3564-3570 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T20 3938-3948 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T21 4122-4128 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T22 4187-4197 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T23 6401-6408 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T24 6423-6430 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T25 6968-6974 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T26 7095-7101 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T27 7249-7255 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1695-1718 Body_part denotes upper respiratory tract http://purl.obolibrary.org/obo/UBERON_0001557
T2 1701-1718 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 396-417 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T2 408-417 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T3 809-830 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T4 821-830 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T5 1175-1186 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T6 1484-1517 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T7 1531-1539 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 1701-1728 Disease denotes respiratory tract infection http://purl.obolibrary.org/obo/MONDO_0024355
T9 1719-1728 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T10 1857-1878 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T11 1869-1878 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T12 2983-2986 Disease denotes CLC http://purl.obolibrary.org/obo/MONDO_0004315
T13 7787-7806 Disease denotes Respiratory Disease http://purl.obolibrary.org/obo/MONDO_0005087

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 34-39 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T2 224-229 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T3 637-642 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T4 997-1002 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T5 1035-1036 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1285-1287 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T7 1288-1290 http://purl.obolibrary.org/obo/CLO_0007074 denotes kb
T8 1288-1290 http://purl.obolibrary.org/obo/CLO_0051988 denotes kb
T9 1296-1297 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 1308-1312 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T11 1360-1368 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T12 1396-1397 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T13 1556-1560 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T14 1612-1616 http://purl.obolibrary.org/obo/CLO_0053799 denotes 4, 5
T15 1639-1644 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T16 1677-1678 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 1733-1736 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T18 1903-1907 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T19 1960-1965 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T20 2164-2165 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 2306-2307 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 2402-2403 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 2422-2423 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 2452-2453 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 2915-2916 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 2928-2938 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrument
T27 2983-2986 http://purl.obolibrary.org/obo/CLO_0002494 denotes CLC
T28 3122-3123 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 3987-3992 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T30 5876-5878 http://purl.obolibrary.org/obo/CLO_0001547 denotes AP
T31 6298-6299 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 7870-7873 http://purl.obolibrary.org/obo/CLO_0008693 denotes R&D
T33 7870-7873 http://purl.obolibrary.org/obo/CLO_0008770 denotes R&D

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1456-1468 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T2 1571-1582 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T3 2589-2592 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T4 2753-2756 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T5 3938-3948 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T6 4051-4055 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T7 4187-4197 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T8 4943-4945 Chemical denotes 9F http://purl.obolibrary.org/obo/CHEBI_24061
T9 5876-5878 Chemical denotes AP http://purl.obolibrary.org/obo/CHEBI_28971|http://purl.obolibrary.org/obo/CHEBI_73393|http://purl.obolibrary.org/obo/CHEBI_81686
T12 6038-6041 Chemical denotes AAP http://purl.obolibrary.org/obo/CHEBI_73323
T13 6688-6692 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T14 7814-7816 Chemical denotes QN http://purl.obolibrary.org/obo/CHEBI_141428
T15 7834-7836 Chemical denotes QN http://purl.obolibrary.org/obo/CHEBI_141428

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 73-92 Phenotype denotes Respiratory Illness http://purl.obolibrary.org/obo/HP_0002086
T2 396-417 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947
T3 809-830 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947
T4 1695-1728 Phenotype denotes upper respiratory tract infection http://purl.obolibrary.org/obo/HP_0002788
T5 1857-1878 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947
T6 7020-7039 Phenotype denotes respiratory illness http://purl.obolibrary.org/obo/HP_0002086

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1412-1419 http://purl.obolibrary.org/obo/GO_0009606 denotes tropism
T2 1623-1638 http://purl.obolibrary.org/obo/GO_0044409 denotes entry into host
T3 2308-2329 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T4 2316-2329 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5 2382-2395 http://purl.obolibrary.org/obo/GO_0003968 denotes transcriptase
T6 2382-2395 http://purl.obolibrary.org/obo/GO_0003899 denotes transcriptase
T7 2527-2542 http://purl.obolibrary.org/obo/GO_0003887 denotes Klenow fragment
T8 2589-2602 http://purl.obolibrary.org/obo/GO_0071897 denotes DNA synthesis
T9 2593-2602 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-126 Sentence denotes Complete Genome Sequences of Five Human Coronavirus NL63 Strains Causing Respiratory Illness in Hospitalized Children in China
T2 127-161 Sentence denotes Microbiology Resource Announcement
T3 162-174 Sentence denotes Zhang et al.
T4 176-309 Sentence denotes We report the complete genome sequences of five human coronavirus NL63 (HCoV-NL63) strains obtained using next-generation sequencing.
T5 310-447 Sentence denotes The five HCoV-NL63 strains were obtained from hospitalized children with severe acute respiratory infection detected in Guangdong, China.
T6 448-569 Sentence denotes This study provides several complete genomes of HCoV-NL63 and improves our understanding of HCoV-NL63 evolution in China.
T7 571-579 Sentence denotes Abstract
T8 580-588 Sentence denotes ABSTRACT
T9 589-722 Sentence denotes We report the complete genome sequences of five human coronavirus NL63 (HCoV-NL63) strains obtained using next-generation sequencing.
T10 723-860 Sentence denotes The five HCoV-NL63 strains were obtained from hospitalized children with severe acute respiratory infection detected in Guangdong, China.
T11 861-982 Sentence denotes This study provides several complete genomes of HCoV-NL63 and improves our understanding of HCoV-NL63 evolution in China.
T12 984-996 Sentence denotes ANNOUNCEMENT
T13 997-1134 Sentence denotes Human coronavirus NL63 (HCoV-NL63) is a member of the family Coronaviridae, genus Alphacoronavirus, and was first discovered in 2004 (1).
T14 1135-1251 Sentence denotes HCoV-NL63 is mainly associated with the common cold in children, the elderly, and immunocompromised patients (2, 3).
T15 1252-1399 Sentence denotes The genome of HCoV-NL63 is about 27 kb with a conserved gene order of 5′-orf1ab-spike (S)-orf3-envelope (E)-membrane (M)-nucleocapsid (N)-poly (A).
T16 1400-1469 Sentence denotes The species tropism of HCoV-NL63 is determined by spike glycoprotein.
T17 1470-1762 Sentence denotes HCoV-NL63 and severe acute respiratory syndrome coronavirus (SARS-CoV) share the same cell receptor, angiotensin converting enzyme 2 (ACE-2) (4, 5), for entry into host cells, and HCoV-NL63 is recognized as a common cause of upper respiratory tract infection and has been prevalent worldwide.
T18 1763-1908 Sentence denotes Here, nasopharyngeal swab samples were collected from hospitalized children with severe acute respiratory infection in Guangzhou, China, in 2018.
T19 1909-2068 Sentence denotes This study was performed in strict accordance with human subject protection guidance provided by the Research Ethics Committee of Guangzhou Medical University.
T20 2069-2520 Sentence denotes The respiratory samples were filtered with 0.22-μm filters, RNA extraction was performed using a Qiagen viral RNA extraction kit, and extracted RNA was used for sequence-independent single-primer amplification (SISPA) (6, 7) as follows: a reverse transcription reaction was performed with SuperScript III reverse transcriptase using a primer containing a fixed sequence, followed by a random hexamer at the 3′ end (FR26RV, GCCGGAGCTCTGCAGATATCNNNNNN).
T21 2521-2603 Sentence denotes Then, Klenow fragment polymerase (New England Biolabs) was used for DNA synthesis.
T22 2604-2743 Sentence denotes Finally, PCR amplification was conducted using primers consisting of the fixed portions of the random primers (FR26, GCCGGAGCTCTGCAGATATC).
T23 2744-2803 Sentence denotes Purified DNA was used for next-generation sequencing (NGS).
T24 2804-3019 Sentence denotes Libraries were prepared with the Nextera XT kit (Illumina), and paired-end reads (2 × 125 bp) determined using a HiSeq 2500 instrument were used for cleaning and assembling using CLC Genomics Workbench version 11.0.
T25 3020-3082 Sentence denotes Illumina sequencing yielded about 10 million reads per sample.
T26 3083-3217 Sentence denotes Reads were assembled into contigs with a de novo assembly model, and the contig sequences were then extracted for subsequent analysis.
T27 3218-3298 Sentence denotes Partial genome sequences of five HCoV-NL63 strains were obtained by NGS methods.
T28 3299-3540 Sentence denotes Meanwhile, sets of specific primer pairs were designed and used to amplify the gap region of HCoV-NL63, which was used for genome assemblies using the SeqMan subprogram of the DNAStar software version 7.1.0 with default parameters (Table 1).
T29 3541-3826 Sentence denotes Finally, five complete genome sequences of HCoV-NL63 were obtained using next-generation sequencing and Sanger sequencing methods together and were designated strains ChinaGD01 (27,531 bp), ChinaGD02 (27,516 bp), ChinaGD03 (27,516 bp), ChinaGD04 (27,532 bp), and ChinaGD05 (27,544 bp).
T30 3827-4091 Sentence denotes The five HCoV-NL63 strains presented here were aligned using MAFFT version 7.158 (8) and showed 98.5 to ∼99.1% nucleotide homology with the prototype HCoV-NL63 virus (GenBank accession number NC_005831.2) as estimated using MEGA version 5.10 software (9) (Fig. 1).
T31 4092-4152 Sentence denotes TABLE 1 Primers used for the genome sequencing of HCoV-NL63
T32 4153-4242 Sentence denotes Primer Sequence (5′–3′) Target (nucleotide position) or amplification method Size (bp)
T33 4243-4286 Sentence denotes 1F CCTGGCCTCTTGCTTTTTCACATGT 20504 1,686
T34 4287-4330 Sentence denotes 1R ACTTCGACGGTTGAGAAACAAATAG 22189 1,686
T35 4331-4374 Sentence denotes 2F CGCGTTAAGAGTGGTTCACCAGGTG 22059 1,623
T36 4375-4418 Sentence denotes 2R CAAAGCTGCAAGCCGTCCAGTAATT 23681 1,623
T37 4419-4462 Sentence denotes 3F TTCAATTCAAGCCGATCAACAAGTT 23624 1,600
T38 4463-4506 Sentence denotes 3R GTCATCAATTAATCGAAGGAACATC 25223 1,600
T39 4507-4550 Sentence denotes 4F CGAAGAGCCTGTTGTTGGTATAGTC 25153 1,690
T40 4551-4594 Sentence denotes 4R AACACGCTTCCAACGAGGTTTCTTC 26849 1,690
T41 4595-4636 Sentence denotes 5F CCAGGGCTGATAAGCCTTCTCAGTT 26800 754
T42 4637-4678 Sentence denotes 5R GTGTATCCATATCAAAAACAATATC 27553 754
T43 4679-4722 Sentence denotes 6F TGAGGATGTTTGTGTTTGTTTTGAC 18864 1,710
T44 4723-4766 Sentence denotes 6R GTCAGGAACACCTAATTGTAACATA 20573 1,710
T45 4767-4810 Sentence denotes 7F TGCGTGGTTGGTTGGGTATGGATGT 17234 1,682
T46 4811-4854 Sentence denotes 7R ACGCTCATACGAACCCTGAATACTA 18915 1,682
T47 4855-4898 Sentence denotes 8F ATTCAGCAACTGGTTCCTTAGATGT 15479 1,808
T48 4899-4942 Sentence denotes 8R GTTATCGCCACAAACATGAGCACTT 17286 1,808
T49 4943-4986 Sentence denotes 9F CTCCCTACTATGACACAGCTGAATC 14005 1,596
T50 4987-5030 Sentence denotes 9R AGCCGCAAAGAGTCTAAGTGTATCT 15600 1,596
T51 5031-5075 Sentence denotes 10F GACCGTACAACTATTCAAAGTGTTG 12398 1,659
T52 5076-5120 Sentence denotes 10R GTTCTTTACCACTAATAGCATACTT 14056 1,659
T53 5121-5164 Sentence denotes 11F GGGCTATGGCTAATGGTTATACAAG 9801 1,435
T54 5165-5209 Sentence denotes 11R TTTGCGATATTCATGGCACGCTTCA 11235 1,435
T55 5210-5254 Sentence denotes 12F ACCCTTCAGAGTGTTGCTTCATCAT 11090 1,378
T56 5255-5299 Sentence denotes 12R AGTCGAGCTGCACTAGAACCCCTTG 12467 1,378
T57 5300-5343 Sentence denotes 13F CAACCACTGTAACTAGCTTTCATGG 7758 2,103
T58 5344-5387 Sentence denotes 13R CTGCCAAAATAGAATAGCACTCAAC 9860 2,103
T59 5388-5431 Sentence denotes 14F GTCAAAAGGGTGATGCTGAAGAGGC 5424 2,394
T60 5432-5475 Sentence denotes 14R TCAACTGACCATTCTCAATGTACTT 7817 2,394
T61 5476-5519 Sentence denotes 15F TAGAGATGAATTGGGTGTTCGTGTT 3424 2,043
T62 5520-5563 Sentence denotes 15R GGTCCAACATCACCTGTAACAAATT 5466 2,043
T63 5564-5607 Sentence denotes 16F GCAGATGTTCCAGATGCTTTTCAAT 1637 1,864
T64 5608-5651 Sentence denotes 16R GCAACTGTACAAGTGTGGTACTAAT 3500 1,864
T65 5652-5694 Sentence denotes 17F CAGCAATTATGTTCTTCAGGACTTT 565 1,118
T66 5695-5738 Sentence denotes 17R GTGTAAATGTGCGATAAACTGATTG 1682 1,118
T67 5739-5779 Sentence denotes 18F CTTAAAGAATTTTTCTATCTATAGA 1 1,056
T68 5780-5823 Sentence denotes 18R CATGCACCAACACTCCAACTCTCAG 1056 1,056
T69 5824-5875 Sentence denotes GSP 1 CGAAGAGCCTGTTGTTGGTATAGTC 3′ RACEa Unknown
T70 5876-5935 Sentence denotes AP GGCCACGCGTCGACTAGTACTTTTTTTTTTTTTTTTT 3′ RACE Unknown
T71 5936-5989 Sentence denotes GSP 2 CCAGGGCTGATAAGCCTTCTCAGTT Nested PCR Unknown
T72 5990-6037 Sentence denotes AUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown
T73 6038-6091 Sentence denotes AAP GGCCACGCGTCGACTAGTACGGGGGGGGGG 5′ RACE Unknown
T74 6092-6142 Sentence denotes GSP 1 GTGTAAATGTGCGATAAACTGATTG 5′ RACE Unknown
T75 6143-6190 Sentence denotes AUAP GGCCACGCGTCGACTAGTAC Nested PCR Unknown
T76 6191-6244 Sentence denotes GSP 2 CATGCACCAACACTCCAACTCTCAG Nested PCR Unknown
T77 6245-6297 Sentence denotes GSP3 CCATGGCCAAAAACAACATCAAAGT Nested PCR Unknown
T78 6298-6340 Sentence denotes a RACE, rapid amplification of cDNA ends.
T79 6341-6409 Sentence denotes FIG 1 Phylogenetic analysis of HCoV-NL63 based on complete genomes.
T80 6410-6590 Sentence denotes The complete genomes of 69 coronavirus references were obtained from the GenBank database, and multiple alignments were performed using MAFFT version 7.158 with default parameters.
T81 6591-6730 Sentence denotes The phylogenetic tree was constructed using the neighbor-joining method with 1,000 bootstraps in MEGA version 5.10 with default parameters.
T82 6731-6784 Sentence denotes The numbers at the nodes represent bootstrap support.
T83 6785-6874 Sentence denotes Bootstrap values greater than 70% were considered statistically significant for grouping.
T84 6875-6949 Sentence denotes The HCoV-NL63 strains presented in this study are marked with red circles.
T85 6950-7081 Sentence denotes Only two complete genome sequences of HCoV-NL63 associated with acute respiratory illness have been obtained and reported in China.
T86 7082-7215 Sentence denotes The complete genome sequence data from our study will provide insight into the evolution and genetic diversity of HCoV-NL63 in China.
T87 7217-7235 Sentence denotes Data availability.
T88 7236-7425 Sentence denotes The complete genome sequences of the five newly identified HCoV-NL63 strains have been deposited in GenBank under the accession numbers MK334043, MK334044, MK334045, MK334046, and MK334047.
T89 7426-7527 Sentence denotes The sequencing reads are available in the SRA database under BioProject accession number PRJNA601331.
T90 7529-7544 Sentence denotes ACKNOWLEDGMENTS
T91 7545-8057 Sentence denotes This research was supported by grants from the National Key Research and Development Program of China (2018YFC1200100), National Natural Science Foundation of China (NSFC 81702047, 81772191, 91842106, and 8181101118), State Key Laboratory of Respiratory Disease (SKLRD-QN-201715 and SKLRD-QN-201912), National Key Technology R&D Program (2018YFC1311900), Guangdong Science and Technology Foundation (2019B030316028), 2015 Thousand Talents Plan Award of China, China Postdoctoral Science Foundation, and the Ph.D.
T92 8058-8135 Sentence denotes Start-up Fund of the Natural Science Foundation of Guangdong Province, China.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
3 34-56 Species denotes Human Coronavirus NL63 Tax:277944
4 109-117 Species denotes Children Tax:9606
5 73-92 Disease denotes Respiratory Illness MESH:D012140
13 224-246 Species denotes human coronavirus NL63 Tax:277944
14 248-257 Species denotes HCoV-NL63 Tax:277944
15 319-328 Species denotes HCoV-NL63 Tax:277944
16 369-377 Species denotes children Tax:9606
17 496-505 Species denotes HCoV-NL63 Tax:277944
18 540-549 Species denotes HCoV-NL63 Tax:277944
19 396-417 Disease denotes respiratory infection MESH:D012141
27 637-659 Species denotes human coronavirus NL63 Tax:277944
28 661-670 Species denotes HCoV-NL63 Tax:277944
29 732-741 Species denotes HCoV-NL63 Tax:277944
30 782-790 Species denotes children Tax:9606
31 909-918 Species denotes HCoV-NL63 Tax:277944
32 953-962 Species denotes HCoV-NL63 Tax:277944
33 809-830 Disease denotes respiratory infection MESH:D012141
49 1571-1602 Gene denotes angiotensin converting enzyme 2 Gene:59272
50 1604-1609 Gene denotes ACE-2 Gene:59272
51 997-1019 Species denotes Human coronavirus NL63 Tax:277944
52 1021-1030 Species denotes HCoV-NL63 Tax:277944
53 1058-1071 Species denotes Coronaviridae Tax:11118
54 1135-1144 Species denotes HCoV-NL63 Tax:277944
55 1190-1198 Species denotes children Tax:9606
56 1235-1243 Species denotes patients Tax:9606
57 1266-1275 Species denotes HCoV-NL63 Tax:277944
58 1423-1432 Species denotes HCoV-NL63 Tax:277944
59 1470-1479 Species denotes HCoV-NL63 Tax:277944
60 1484-1529 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
61 1531-1539 Species denotes SARS-CoV Tax:694009
62 1650-1659 Species denotes HCoV-NL63 Tax:277944
63 1695-1728 Disease denotes upper respiratory tract infection MESH:D012141
72 1830-1838 Species denotes children Tax:9606
73 1960-1965 Species denotes human Tax:9606
74 3251-3260 Species denotes HCoV-NL63 Tax:277944
75 3392-3401 Species denotes HCoV-NL63 Tax:277944
76 3584-3593 Species denotes HCoV-NL63 Tax:277944
77 3836-3845 Species denotes HCoV-NL63 Tax:277944
78 3977-3986 Species denotes HCoV-NL63 Tax:277944
79 1857-1878 Disease denotes respiratory infection MESH:D012141
83 6373-6382 Species denotes HCoV-NL63 Tax:277944
84 6437-6448 Species denotes coronavirus Tax:11118
85 6879-6888 Species denotes HCoV-NL63 Tax:277944
89 6988-6997 Species denotes HCoV-NL63 Tax:277944
90 7196-7205 Species denotes HCoV-NL63 Tax:277944
91 7020-7039 Disease denotes respiratory illness MESH:D012140
96 7295-7304 Species denotes HCoV-NL63 Tax:277944
97 7372-7380 Chemical denotes MK334043
98 7382-7390 Chemical denotes MK334044
99 7402-7410 Chemical denotes MK334046

2_test

Id Subject Object Predicate Lexical cue
32079638-15034574-69772757 1131-1132 15034574 denotes 1
32079638-16911043-69772758 1245-1246 16911043 denotes 2
32079638-16282944-69772759 1248-1249 16282944 denotes 3
32079638-15897467-69772760 1612-1613 15897467 denotes 4
32079638-16007097-69772761 1615-1616 16007097 denotes 5
32079638-1664049-69772762 2288-2289 1664049 denotes 6
32079638-28968734-69772763 3909-3910 28968734 denotes 8
32079638-21546353-69772764 4079-4080 21546353 denotes 9